RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 SOCS3O14543 225 aa16.23■□□□□ 0.19
SPHK1-202ENST00000392496 MT-ND6P03923 174 aa16.23■□□□□ 0.19
SPHK1-202ENST00000392496 CBLN1P23435 193 aa16.23■□□□□ 0.19
SPHK1-202ENST00000392496 NDFIP1Q9BT67 221 aa16.23■□□□□ 0.19
SPHK1-202ENST00000392496 IGHV4OR15-8A0A075B7B6 117 aa16.22■□□□□ 0.19
SPHK1-202ENST00000392496 A0A087WW49 117 aa16.22■□□□□ 0.19
SPHK1-202ENST00000392496 A8MWP6 167 aa16.22■□□□□ 0.19
SPHK1-202ENST00000392496 LGALS9O00182 355 aa16.22■□□□□ 0.19
SPHK1-202ENST00000392496 SPINK4O60575 86 aa16.22■□□□□ 0.19
SPHK1-202ENST00000392496 OR2D3Q8NGH3 330 aa16.22■□□□□ 0.19
SPHK1-202ENST00000392496 NRN1Q9NPD7 142 aa16.22■□□□□ 0.19
SPHK1-202ENST00000392496 SNURFLB1AK76 121 aa16.21■□□□□ 0.19
SPHK1-202ENST00000392496 FRMD6-AS1P0C7T7 363 aa16.21■□□□□ 0.19
SPHK1-202ENST00000392496 CDX1P47902 265 aaPredicted RBP16.21■□□□□ 0.19
SPHK1-202ENST00000392496 WIPF2Q8TF74 440 aaPredicted RBP16.21■□□□□ 0.19
SPHK1-202ENST00000392496 ANK3Q12955 4377 aaKnown RBP16.21■□□□□ 0.19
SPHK1-202ENST00000392496 TMEM213A2RRL7 107 aa16.21■□□□□ 0.18
SPHK1-202ENST00000392496 MRPL54Q6P161 138 aaKnown RBP16.21■□□□□ 0.18
SPHK1-202ENST00000392496 ATP5L2Q7Z4Y8 100 aa16.21■□□□□ 0.18
SPHK1-202ENST00000392496 Q8TAT8 98 aa16.21■□□□□ 0.18
SPHK1-202ENST00000392496 MRPL18Q9H0U6 180 aaKnown RBP16.21■□□□□ 0.18
SPHK1-202ENST00000392496 RNASE1P07998 156 aaKnown RBP16.2■□□□□ 0.18
SPHK1-202ENST00000392496 ERCC8Q13216 396 aa16.2■□□□□ 0.18
SPHK1-202ENST00000392496 TMEM136Q6ZRR5 245 aa16.2■□□□□ 0.18
SPHK1-202ENST00000392496 TCF24Q7RTU0 167 aa16.2■□□□□ 0.18
SPHK1-202ENST00000392496 GTSF1Q8WW33 167 aa16.2■□□□□ 0.18
SPHK1-202ENST00000392496 SMUG1Q53HV7 270 aa16.19■□□□□ 0.18
SPHK1-202ENST00000392496 FAM162BQ5T6X4 162 aa16.19■□□□□ 0.18
SPHK1-202ENST00000392496 C9orf47Q6ZRZ4 202 aa16.19■□□□□ 0.18
SPHK1-202ENST00000392496 PPP1R14DQ9NXH3 145 aa16.19■□□□□ 0.18
SPHK1-202ENST00000392496 HLA-DQA1P01909 254 aa16.18■□□□□ 0.18
SPHK1-202ENST00000392496 HOXD3P31249 432 aaPredicted RBP16.18■□□□□ 0.18
SPHK1-202ENST00000392496 AKR1D1P51857 326 aa16.18■□□□□ 0.18
SPHK1-202ENST00000392496 FOXA3P55318 350 aaPredicted RBP16.18■□□□□ 0.18
SPHK1-202ENST00000392496 RPL11P62913 178 aaKnown RBP16.18■□□□□ 0.18
SPHK1-202ENST00000392496 COA6Q5JTJ3 125 aaKnown RBP16.18■□□□□ 0.18
SPHK1-202ENST00000392496 SAMD13Q5VXD3 122 aa16.18■□□□□ 0.18
SPHK1-202ENST00000392496 RBPMS2Q6ZRY4 209 aaKnown RBP16.18■□□□□ 0.18
SPHK1-202ENST00000392496 C20orf173Q96LM9 149 aa16.18■□□□□ 0.18
SPHK1-202ENST00000392496 AGPAT4-IT1Q9H0P7 198 aa16.18■□□□□ 0.18
SPHK1-202ENST00000392496 SONP18583 2426 aaKnown RBP16.18■□□□□ 0.18
SPHK1-202ENST00000392496 SH2D1AO60880 128 aa16.18■□□□□ 0.18
SPHK1-202ENST00000392496 SRD5A1P18405 259 aa16.18■□□□□ 0.18
SPHK1-202ENST00000392496 EDN2P20800 178 aa16.18■□□□□ 0.18
SPHK1-202ENST00000392496 TMEM78Q5T7P6 136 aa16.18■□□□□ 0.18
SPHK1-202ENST00000392496 ZNF418Q8TF45 676 aaPredicted RBP16.18■□□□□ 0.18
SPHK1-202ENST00000392496 C4orf3Q8WVX3 66 aa16.18■□□□□ 0.18
SPHK1-202ENST00000392496 GPR61Q9BZJ8 451 aa16.18■□□□□ 0.18
SPHK1-202ENST00000392496 ZNF138P52744 262 aa16.17■□□□□ 0.18
SPHK1-202ENST00000392496 SYNJ2BPP57105 145 aa16.17■□□□□ 0.18
SPHK1-202ENST00000392496 TCTEX1D4Q5JR98 221 aa16.17■□□□□ 0.18
SPHK1-202ENST00000392496 ZNF738Q8NE65 137 aa16.17■□□□□ 0.18
SPHK1-202ENST00000392496 XKRY2A2RUG3 117 aa16.16■□□□□ 0.18
SPHK1-202ENST00000392496 OVOL1O14753 267 aa16.16■□□□□ 0.18
SPHK1-202ENST00000392496 WFDC12Q8WWY7 111 aa16.16■□□□□ 0.18
SPHK1-202ENST00000392496 A0A1B0GXF2 115 aa16.15■□□□□ 0.18
SPHK1-202ENST00000392496 KLF5Q13887 457 aaPredicted RBP16.15■□□□□ 0.18
SPHK1-202ENST00000392496 INAFM1C9JVW0 142 aa16.15■□□□□ 0.18
SPHK1-202ENST00000392496 GZMBP10144 247 aa16.15■□□□□ 0.18
SPHK1-202ENST00000392496 RAB4BP61018 213 aa16.15■□□□□ 0.18
SPHK1-202ENST00000392496 SRSF2Q01130 221 aaKnown RBP16.15■□□□□ 0.18
SPHK1-202ENST00000392496 C18orf65Q6ZTR6 163 aa16.15■□□□□ 0.18
SPHK1-202ENST00000392496 HIST3H2BBQ8N257 126 aa16.15■□□□□ 0.18
SPHK1-202ENST00000392496 PGLYRP4Q96LB8 373 aa16.15■□□□□ 0.18
SPHK1-202ENST00000392496 C16orf95Q9H693 158 aa16.15■□□□□ 0.18
SPHK1-202ENST00000392496 TMEM189A5PLL7 270 aa16.14■□□□□ 0.17
SPHK1-202ENST00000392496 LINC01619G3V211 115 aa16.14■□□□□ 0.17
SPHK1-202ENST00000392496 ZNF80P51504 273 aaPredicted RBP16.14■□□□□ 0.17
SPHK1-202ENST00000392496 HILS1P60008 231 aa16.14■□□□□ 0.17
SPHK1-202ENST00000392496 LENEPQ9Y5L5 61 aa16.14■□□□□ 0.17
SPHK1-202ENST00000392496 S100A8P05109 93 aa16.13■□□□□ 0.17
SPHK1-202ENST00000392496 ID1P41134 155 aa16.13■□□□□ 0.17
SPHK1-202ENST00000392496 GFI1BQ5VTD9 330 aa16.13■□□□□ 0.17
SPHK1-202ENST00000392496 Q6AWC8 147 aa16.13■□□□□ 0.17
SPHK1-202ENST00000392496 LINC00477Q96M19 166 aa16.13■□□□□ 0.17
SPHK1-202ENST00000392496 FABP5P3A8MUU1 101 aa16.13■□□□□ 0.17
SPHK1-202ENST00000392496 RPS20P60866 119 aaKnown RBP16.13■□□□□ 0.17
SPHK1-202ENST00000392496 HBBP68871 147 aa16.13■□□□□ 0.17
SPHK1-202ENST00000392496 DCANP1Q8TF63 244 aa16.13■□□□□ 0.17
SPHK1-202ENST00000392496 IGKV3-7A0A075B6H7 116 aa16.12■□□□□ 0.17
SPHK1-202ENST00000392496 C2orf70A6NJV1 201 aa16.12■□□□□ 0.17
SPHK1-202ENST00000392496 OR10J6PQ8NGY7 276 aa16.12■□□□□ 0.17
SPHK1-202ENST00000392496 DPF1Q92782 380 aa16.12■□□□□ 0.17
SPHK1-202ENST00000392496 IFITM10A6NMD0 228 aa16.11■□□□□ 0.17
SPHK1-202ENST00000392496 DEFB136Q30KP8 78 aa16.11■□□□□ 0.17
SPHK1-202ENST00000392496 KHDC1LQ5JSQ8 128 aa16.11■□□□□ 0.17
SPHK1-202ENST00000392496 GDF5OSQ5U4N7 250 aa16.11■□□□□ 0.17
SPHK1-202ENST00000392496 OR11H1Q8NG94 326 aa16.11■□□□□ 0.17
SPHK1-202ENST00000392496 OR1N2Q8NGR9 330 aa16.11■□□□□ 0.17
SPHK1-202ENST00000392496 APCSP02743 223 aa16.1■□□□□ 0.17
SPHK1-202ENST00000392496 SLURP1P55000 103 aa16.1■□□□□ 0.17
SPHK1-202ENST00000392496 KLHL30-AS1Q8NEE0 82 aa16.1■□□□□ 0.17
SPHK1-202ENST00000392496 M0QZ24 198 aa16.1■□□□□ 0.17
SPHK1-202ENST00000392496 HAX1O00165 279 aa16.1■□□□□ 0.17
SPHK1-202ENST00000392496 CRLF1O75462 422 aa16.1■□□□□ 0.17
SPHK1-202ENST00000392496 CRISP2P16562 243 aa16.1■□□□□ 0.17
SPHK1-202ENST00000392496 CAMPP49913 170 aa16.1■□□□□ 0.17
SPHK1-202ENST00000392496 JMJD8Q96S16 334 aa16.1■□□□□ 0.17
SPHK1-202ENST00000392496 MS4A6AQ9H2W1 248 aa16.1■□□□□ 0.17
SPHK1-202ENST00000392496 HIST1H1AQ02539 215 aaPredicted RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms