RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 LGALS3P17931 250 aaKnown RBP13.53□□□□□ -0.24
TRAF3IP1-202ENST00000391993 FABP5P3A8MUU1 101 aa13.53□□□□□ -0.24
TRAF3IP1-202ENST00000391993 RRN3P1Q2M238 152 aa13.53□□□□□ -0.24
TRAF3IP1-202ENST00000391993 PPP1R27Q86WC6 154 aa13.53□□□□□ -0.24
TRAF3IP1-202ENST00000391993 ZNF256Q9Y2P7 627 aaPredicted RBP13.53□□□□□ -0.24
TRAF3IP1-202ENST00000391993 CRXO43186 299 aaPredicted RBP13.52□□□□□ -0.24
TRAF3IP1-202ENST00000391993 HLA-DMBP28068 263 aa13.52□□□□□ -0.24
TRAF3IP1-202ENST00000391993 GAGE5Q13069 117 aa13.52□□□□□ -0.24
TRAF3IP1-202ENST00000391993 GAGE6Q13070 117 aa13.52□□□□□ -0.24
TRAF3IP1-202ENST00000391993 LYNX1G3V0Z9 82 aa13.51□□□□□ -0.25
TRAF3IP1-202ENST00000391993 LYNX1P0DP58 116 aa13.51□□□□□ -0.25
TRAF3IP1-202ENST00000391993 PLSCR4Q9NRQ2 329 aa13.51□□□□□ -0.25
TRAF3IP1-202ENST00000391993 CPAMD8Q8IZJ3 1885 aa13.51□□□□□ -0.25
TRAF3IP1-202ENST00000391993 IGKV3-15P01624 115 aa13.51□□□□□ -0.25
TRAF3IP1-202ENST00000391993 SCGB1A1P11684 91 aa13.51□□□□□ -0.25
TRAF3IP1-202ENST00000391993 LAGE3Q14657 143 aa13.51□□□□□ -0.25
TRAF3IP1-202ENST00000391993 APOBEC3AP31941 199 aaPredicted RBP13.5□□□□□ -0.25
TRAF3IP1-202ENST00000391993 CSPG4Q6UVK1 2322 aa13.5□□□□□ -0.25
TRAF3IP1-202ENST00000391993 FOXI1Q12951 378 aa13.5□□□□□ -0.25
TRAF3IP1-202ENST00000391993 KLHL30-AS1Q8NEE0 82 aa13.5□□□□□ -0.25
TRAF3IP1-202ENST00000391993 TMEM167AQ8TBQ9 72 aa13.5□□□□□ -0.25
TRAF3IP1-202ENST00000391993 UBTD1Q9HAC8 227 aa13.5□□□□□ -0.25
TRAF3IP1-202ENST00000391993 A0A0U1RRA0 63 aa13.49□□□□□ -0.25
TRAF3IP1-202ENST00000391993 MFAP4P55083 255 aa13.49□□□□□ -0.25
TRAF3IP1-202ENST00000391993 TRGV9Q99603 122 aa13.49□□□□□ -0.25
TRAF3IP1-202ENST00000391993 C9orf172C9J069 976 aa13.49□□□□□ -0.25
TRAF3IP1-202ENST00000391993 PPDPFLQ8WWR9 84 aa13.49□□□□□ -0.25
TRAF3IP1-202ENST00000391993 KIR2DL4Q99706 377 aa13.49□□□□□ -0.25
TRAF3IP1-202ENST00000391993 C1QTNF4Q9BXJ3 329 aa13.49□□□□□ -0.25
TRAF3IP1-202ENST00000391993 SIVA1O15304 175 aa13.49□□□□□ -0.25
TRAF3IP1-202ENST00000391993 SRSF1Q07955 248 aaKnown RBP eCLIP13.49□□□□□ -0.25
TRAF3IP1-202ENST00000391993 TRANK1O15050 2925 aa13.49□□□□□ -0.25
TRAF3IP1-202ENST00000391993 GLRXP35754 106 aa13.48□□□□□ -0.25
TRAF3IP1-202ENST00000391993 LINC00312Q9Y6C7 94 aa13.48□□□□□ -0.25
TRAF3IP1-202ENST00000391993 RITA1Q96K30 269 aa13.48□□□□□ -0.25
TRAF3IP1-202ENST00000391993 TRAV17A0A0B4J275 112 aa13.48□□□□□ -0.25
TRAF3IP1-202ENST00000391993 TMEM262E9PQX1 116 aa13.48□□□□□ -0.25
TRAF3IP1-202ENST00000391993 TMEM200BQ69YZ2 307 aa13.48□□□□□ -0.25
TRAF3IP1-202ENST00000391993 ZFP2Q6ZN57 461 aa13.48□□□□□ -0.25
TRAF3IP1-202ENST00000391993 KLRB1Q12918 225 aa13.48□□□□□ -0.25
TRAF3IP1-202ENST00000391993 RNF182Q8N6D2 247 aa13.48□□□□□ -0.25
TRAF3IP1-202ENST00000391993 PRADC1Q9BSG0 188 aa13.48□□□□□ -0.25
TRAF3IP1-202ENST00000391993 TET2Q6N021 2002 aaPredicted RBP13.47□□□□□ -0.25
TRAF3IP1-202ENST00000391993 EGR2P11161 476 aaPredicted RBP13.47□□□□□ -0.25
TRAF3IP1-202ENST00000391993 C16orf92Q96LL3 132 aa13.47□□□□□ -0.25
TRAF3IP1-202ENST00000391993 TRBV19A0A075B6N1 114 aa13.47□□□□□ -0.25
TRAF3IP1-202ENST00000391993 GATA3P23771 443 aa13.47□□□□□ -0.25
TRAF3IP1-202ENST00000391993 C10orf126Q8N4M7 172 aa13.47□□□□□ -0.25
TRAF3IP1-202ENST00000391993 PRRG2O14669 202 aa13.47□□□□□ -0.25
TRAF3IP1-202ENST00000391993 DDB2Q92466 427 aa13.47□□□□□ -0.25
TRAF3IP1-202ENST00000391993 TRAV8-4A0A0B4J246 113 aa13.46□□□□□ -0.25
TRAF3IP1-202ENST00000391993 GAGE12JA6NER3 117 aa13.46□□□□□ -0.25
TRAF3IP1-202ENST00000391993 GAGE7O76087 117 aa13.46□□□□□ -0.25
TRAF3IP1-202ENST00000391993 IGKV3-20P01619 116 aa13.46□□□□□ -0.25
TRAF3IP1-202ENST00000391993 IGHV1-46P01743 117 aa13.46□□□□□ -0.25
TRAF3IP1-202ENST00000391993 GAGE12FP0CL80 117 aa13.46□□□□□ -0.25
TRAF3IP1-202ENST00000391993 GAGE12GP0CL81 117 aa13.46□□□□□ -0.25
TRAF3IP1-202ENST00000391993 GAGE12IP0CL82 117 aa13.46□□□□□ -0.25
TRAF3IP1-202ENST00000391993 GAGE4Q13068 117 aa13.46□□□□□ -0.25
TRAF3IP1-202ENST00000391993 ANKHD1Q8IWZ3 2542 aaKnown RBP13.46□□□□□ -0.25
TRAF3IP1-202ENST00000391993 C19orf71A6NCJ1 209 aa13.46□□□□□ -0.25
TRAF3IP1-202ENST00000391993 GAFA1Q96PS6 74 aa13.46□□□□□ -0.25
TRAF3IP1-202ENST00000391993 KLF12Q9Y4X4 402 aa13.46□□□□□ -0.25
TRAF3IP1-202ENST00000391993 SONP18583 2426 aaKnown RBP13.46□□□□□ -0.25
TRAF3IP1-202ENST00000391993 EIF4EBP1Q13541 118 aaPredicted RBP13.46□□□□□ -0.26
TRAF3IP1-202ENST00000391993 C14orf178Q8N769 122 aaPredicted RBP13.46□□□□□ -0.26
TRAF3IP1-202ENST00000391993 MAPKAPK5-AS1Q8N8E1 139 aa13.46□□□□□ -0.26
TRAF3IP1-202ENST00000391993 ABHD17AQ96GS6 310 aa13.46□□□□□ -0.26
TRAF3IP1-202ENST00000391993 WDFY4Q6ZS81 3184 aa13.45□□□□□ -0.26
TRAF3IP1-202ENST00000391993 PTPN13Q12923 2485 aa13.45□□□□□ -0.26
TRAF3IP1-202ENST00000391993 NTN5Q8WTR8 489 aaPredicted RBP13.45□□□□□ -0.26
TRAF3IP1-202ENST00000391993 DSPP15924 2871 aaKnown RBP13.45□□□□□ -0.26
TRAF3IP1-202ENST00000391993 LYPD2Q6UXB3 125 aa13.45□□□□□ -0.26
TRAF3IP1-202ENST00000391993 FDCSPQ8NFU4 85 aa13.45□□□□□ -0.26
TRAF3IP1-202ENST00000391993 SMPXQ9UHP9 88 aa13.45□□□□□ -0.26
TRAF3IP1-202ENST00000391993 H7C1H1 209 aa13.44□□□□□ -0.26
TRAF3IP1-202ENST00000391993 Q6ZUT4 128 aa13.44□□□□□ -0.26
TRAF3IP1-202ENST00000391993 DTX2Q86UW9 622 aa13.44□□□□□ -0.26
TRAF3IP1-202ENST00000391993 C21orf62Q9NYP8 219 aa13.44□□□□□ -0.26
TRAF3IP1-202ENST00000391993 MYMXA0A1B0GTQ4 84 aa13.44□□□□□ -0.26
TRAF3IP1-202ENST00000391993 GP9P14770 177 aa13.44□□□□□ -0.26
TRAF3IP1-202ENST00000391993 ODF1Q14990 250 aa13.44□□□□□ -0.26
TRAF3IP1-202ENST00000391993 ZNF56Q15929 161 aa13.44□□□□□ -0.26
TRAF3IP1-202ENST00000391993 PRSS22Q9GZN4 317 aa13.44□□□□□ -0.26
TRAF3IP1-202ENST00000391993 WISP2O76076 250 aa13.44□□□□□ -0.26
TRAF3IP1-202ENST00000391993 IGKV3D-20A0A0C4DH25 116 aa13.43□□□□□ -0.26
TRAF3IP1-202ENST00000391993 GAS8-AS1O95177 125 aa13.43□□□□□ -0.26
TRAF3IP1-202ENST00000391993 COX6CP09669 75 aa13.43□□□□□ -0.26
TRAF3IP1-202ENST00000391993 ADIPOQQ15848 244 aa13.43□□□□□ -0.26
TRAF3IP1-202ENST00000391993 MLST8Q9BVC4 326 aa13.43□□□□□ -0.26
TRAF3IP1-202ENST00000391993 ERG28Q9UKR5 140 aa13.43□□□□□ -0.26
TRAF3IP1-202ENST00000391993 TM4SF5O14894 197 aa13.43□□□□□ -0.26
TRAF3IP1-202ENST00000391993 ZNF688P0C7X2 276 aa13.43□□□□□ -0.26
TRAF3IP1-202ENST00000391993 MEIG1Q5JSS6 88 aa13.42□□□□□ -0.26
TRAF3IP1-202ENST00000391993 ZNF474Q6S9Z5 364 aaPredicted RBP13.42□□□□□ -0.26
TRAF3IP1-202ENST00000391993 C1orf210Q8IVY1 113 aa13.42□□□□□ -0.26
TRAF3IP1-202ENST00000391993 PLNP26678 52 aa13.42□□□□□ -0.26
TRAF3IP1-202ENST00000391993 ZFHX2Q9C0A1 2572 aaPredicted RBP13.42□□□□□ -0.26
TRAF3IP1-202ENST00000391993 IGKV1D-37A0A075B6S9 117 aa13.42□□□□□ -0.26
TRAF3IP1-202ENST00000391993 LY6G6EA0A0G2JKS1 128 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms