RNA–Protein interactions for RNA: ENST00000391057.1

RNU6-550P-201, Transcript of RNA, U6 small nuclear 550, pseudogene, humanhuman

BASIC

Gene RNU6-550P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-550P-201ENST00000391057 ZNF56Q15929 161 aa-0.14□□□□□ -2.43
RNU6-550P-201ENST00000391057 OR4B1Q8NGF8 309 aa-0.14□□□□□ -2.43
RNU6-550P-201ENST00000391057 OR5AK2Q8NH90 309 aa-0.14□□□□□ -2.43
RNU6-550P-201ENST00000391057 PLEKHB2Q96CS7 222 aa-0.14□□□□□ -2.43
RNU6-550P-201ENST00000391057 CHMP6Q96FZ7 201 aa-0.14□□□□□ -2.43
RNU6-550P-201ENST00000391057 LINC00208Q96KT6 92 aa-0.14□□□□□ -2.43
RNU6-550P-201ENST00000391057 CAMSAP1Q5T5Y3 1602 aa-0.14□□□□□ -2.43
RNU6-550P-201ENST00000391057 DSPPQ9NZW4 1301 aa-0.14□□□□□ -2.43
RNU6-550P-201ENST00000391057 BBIP1A8MTZ0 92 aa-0.15□□□□□ -2.43
RNU6-550P-201ENST00000391057 MFSD11O43934 449 aa-0.15□□□□□ -2.43
RNU6-550P-201ENST00000391057 CSN2P05814 226 aa-0.15□□□□□ -2.43
RNU6-550P-201ENST00000391057 ARF6P62330 175 aa-0.15□□□□□ -2.43
RNU6-550P-201ENST00000391057 POU6F1Q14863 301 aa-0.15□□□□□ -2.43
RNU6-550P-201ENST00000391057 CCL4L1Q8NHW4 92 aa-0.15□□□□□ -2.43
RNU6-550P-201ENST00000391057 CIB3Q96Q77 187 aaPredicted RBP-0.15□□□□□ -2.43
RNU6-550P-201ENST00000391057 IL20Q9NYY1 176 aa-0.15□□□□□ -2.43
RNU6-550P-201ENST00000391057 LAMTOR3Q9UHA4 124 aa-0.15□□□□□ -2.43
RNU6-550P-201ENST00000391057 KIAA1107Q9UPP5 1409 aa-0.15□□□□□ -2.43
RNU6-550P-201ENST00000391057 KNTC1P50748 2209 aa-0.15□□□□□ -2.43
RNU6-550P-201ENST00000391057 E2F6O75461 281 aa-0.16□□□□□ -2.44
RNU6-550P-201ENST00000391057 SPINK1P00995 79 aa-0.16□□□□□ -2.44
RNU6-550P-201ENST00000391057 NDUFA6P56556 154 aa-0.16□□□□□ -2.44
RNU6-550P-201ENST00000391057 LTC4SQ16873 150 aa-0.16□□□□□ -2.44
RNU6-550P-201ENST00000391057 CSAG1Q6PB30 78 aa-0.16□□□□□ -2.44
RNU6-550P-201ENST00000391057 IZUMO2Q6UXV1 221 aa-0.16□□□□□ -2.44
RNU6-550P-201ENST00000391057 C3orf62Q6ZUJ4 267 aa-0.16□□□□□ -2.44
RNU6-550P-201ENST00000391057 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.16□□□□□ -2.44
RNU6-550P-201ENST00000391057 TMEM229BQ8NBD8 167 aa-0.16□□□□□ -2.44
RNU6-550P-201ENST00000391057 BORCS8Q96FH0 119 aa-0.16□□□□□ -2.44
RNU6-550P-201ENST00000391057 OTORQ9NRC9 128 aa-0.16□□□□□ -2.44
RNU6-550P-201ENST00000391057 MRPL35Q9NZE8 188 aaKnown RBP-0.16□□□□□ -2.44
RNU6-550P-201ENST00000391057 A0A1W2PPB8 328 aa-0.17□□□□□ -2.44
RNU6-550P-201ENST00000391057 A0A1W2PRS3 328 aa-0.17□□□□□ -2.44
RNU6-550P-201ENST00000391057 KIR3DP1A8MWS1 328 aa-0.17□□□□□ -2.44
RNU6-550P-201ENST00000391057 FABP2P12104 132 aa-0.17□□□□□ -2.44
RNU6-550P-201ENST00000391057 RPL19P84098 196 aaKnown RBP-0.17□□□□□ -2.44
RNU6-550P-201ENST00000391057 FXYD3Q14802 87 aa-0.17□□□□□ -2.44
RNU6-550P-201ENST00000391057 TCTEX1D1Q8N7M0 179 aa-0.17□□□□□ -2.44
RNU6-550P-201ENST00000391057 DIRC1Q969H9 104 aa-0.17□□□□□ -2.44
RNU6-550P-201ENST00000391057 CARD19Q96LW7 228 aa-0.17□□□□□ -2.44
RNU6-550P-201ENST00000391057 TAF9BQ9HBM6 251 aa-0.17□□□□□ -2.44
RNU6-550P-201ENST00000391057 MED11Q9P086 117 aa-0.17□□□□□ -2.44
RNU6-550P-201ENST00000391057 MACF1Q9UPN3 7388 aaKnown RBP-0.17□□□□□ -2.44
RNU6-550P-201ENST00000391057 PIK3C2AO00443 1686 aa-0.18□□□□□ -2.44
RNU6-550P-201ENST00000391057 ARL5CA6NH57 179 aa-0.18□□□□□ -2.44
RNU6-550P-201ENST00000391057 TPT1P13693 172 aaKnown RBP-0.18□□□□□ -2.44
RNU6-550P-201ENST00000391057 GNG3P63215 75 aa-0.18□□□□□ -2.44
RNU6-550P-201ENST00000391057 TMED4Q7Z7H5 227 aa-0.18□□□□□ -2.44
RNU6-550P-201ENST00000391057 OR5H6Q8NGV6 325 aa-0.18□□□□□ -2.44
RNU6-550P-201ENST00000391057 LRTM1Q9HBL6 345 aa-0.18□□□□□ -2.44
RNU6-550P-201ENST00000391057 PROK2Q9HC23 129 aa-0.18□□□□□ -2.44
RNU6-550P-201ENST00000391057 MRPL36Q9P0J6 103 aaKnown RBP-0.18□□□□□ -2.44
RNU6-550P-201ENST00000391057 STOML2Q9UJZ1 356 aa-0.18□□□□□ -2.44
RNU6-550P-201ENST00000391057 NUBP2Q9Y5Y2 271 aa-0.18□□□□□ -2.44
RNU6-550P-201ENST00000391057 CTTNBP2Q8WZ74 1663 aa-0.18□□□□□ -2.44
RNU6-550P-201ENST00000391057 LOC107984156A0A0G2JMH3 177 aa-0.19□□□□□ -2.44
RNU6-550P-201ENST00000391057 LOC101927531A0A1B0GV80 90 aa-0.19□□□□□ -2.44
RNU6-550P-201ENST00000391057 FXYD1O00168 92 aa-0.19□□□□□ -2.44
RNU6-550P-201ENST00000391057 GLRXP35754 106 aa-0.19□□□□□ -2.44
RNU6-550P-201ENST00000391057 Q5BKY6 102 aa-0.19□□□□□ -2.44
RNU6-550P-201ENST00000391057 DEFB132Q7Z7B7 95 aa-0.19□□□□□ -2.44
RNU6-550P-201ENST00000391057 ARL17AQ8IVW1 177 aa-0.19□□□□□ -2.44
RNU6-550P-201ENST00000391057 SMIM20Q8N5G0 67 aa-0.19□□□□□ -2.44
RNU6-550P-201ENST00000391057 C5orf56Q8N8D9 126 aa-0.19□□□□□ -2.44
RNU6-550P-201ENST00000391057 CLEC2BQ92478 149 aa-0.19□□□□□ -2.44
RNU6-550P-201ENST00000391057 ISOC1Q96CN7 298 aa-0.19□□□□□ -2.44
RNU6-550P-201ENST00000391057 TPRP12270 2363 aaKnown RBP-0.19□□□□□ -2.44
RNU6-550P-201ENST00000391057 NBDYA0A0U1RRE5 68 aa-0.2□□□□□ -2.44
RNU6-550P-201ENST00000391057 HIGD1CA8MV81 97 aa-0.2□□□□□ -2.44
RNU6-550P-201ENST00000391057 IGF2P01344 180 aa-0.2□□□□□ -2.44
RNU6-550P-201ENST00000391057 TCTAP57738 103 aa-0.2□□□□□ -2.44
RNU6-550P-201ENST00000391057 TAS2R41P59536 307 aa-0.2□□□□□ -2.44
RNU6-550P-201ENST00000391057 DNAJB13P59910 316 aa-0.2□□□□□ -2.44
RNU6-550P-201ENST00000391057 VMO1Q7Z5L0 202 aa-0.2□□□□□ -2.44
RNU6-550P-201ENST00000391057 STX19Q8N4C7 294 aa-0.2□□□□□ -2.44
RNU6-550P-201ENST00000391057 FAM24BQ8N5W8 94 aa-0.2□□□□□ -2.44
RNU6-550P-201ENST00000391057 DYDC1Q8WWB3 177 aa-0.2□□□□□ -2.44
RNU6-550P-201ENST00000391057 PRELID3AQ96N28 172 aa-0.2□□□□□ -2.44
RNU6-550P-201ENST00000391057 UFC1Q9Y3C8 167 aa-0.2□□□□□ -2.44
RNU6-550P-201ENST00000391057 KDM6BO15054 1643 aa-0.2□□□□□ -2.44
RNU6-550P-201ENST00000391057 TRAPPC8Q9Y2L5 1435 aa-0.21□□□□□ -2.44
RNU6-550P-201ENST00000391057 TRDV1A0A1B0GX56 115 aa-0.21□□□□□ -2.44
RNU6-550P-201ENST00000391057 SAA1P0DJI8 122 aaPredicted RBP-0.21□□□□□ -2.44
RNU6-550P-201ENST00000391057 MAXP61244 160 aa-0.21□□□□□ -2.44
RNU6-550P-201ENST00000391057 CCSMST1Q4G0I0 132 aa-0.21□□□□□ -2.44
RNU6-550P-201ENST00000391057 AP3S1Q92572 193 aa-0.21□□□□□ -2.44
RNU6-550P-201ENST00000391057 BDP1A6H8Y1 2624 aa-0.21□□□□□ -2.44
RNU6-550P-201ENST00000391057 LRP1Q07954 4544 aaKnown RBP-0.21□□□□□ -2.44
RNU6-550P-201ENST00000391057 RBBP6Q7Z6E9 1792 aaKnown RBP-0.22□□□□□ -2.44
RNU6-550P-201ENST00000391057 TMEM30CPA0ZSE6 113 aa-0.22□□□□□ -2.44
RNU6-550P-201ENST00000391057 SDC2P34741 201 aa-0.22□□□□□ -2.44
RNU6-550P-201ENST00000391057 C19orf12Q9NSK7 152 aa-0.22□□□□□ -2.44
RNU6-550P-201ENST00000391057 COMMD3Q9UBI1 195 aa-0.22□□□□□ -2.44
RNU6-550P-201ENST00000391057 MPC1Q9Y5U8 109 aa-0.22□□□□□ -2.44
RNU6-550P-201ENST00000391057 FGD6Q6ZV73 1430 aa-0.22□□□□□ -2.45
RNU6-550P-201ENST00000391057 HRNRQ86YZ3 2850 aaPredicted RBP-0.23□□□□□ -2.45
RNU6-550P-201ENST00000391057 LOC107986453A0A1B0GWG9 222 aa-0.23□□□□□ -2.45
RNU6-550P-201ENST00000391057 GABARAPH6UMI1 98 aa-0.23□□□□□ -2.45
RNU6-550P-201ENST00000391057 MRPS15P82914 257 aaKnown RBP-0.23□□□□□ -2.45
RNU6-550P-201ENST00000391057 OR8J3Q8NGG0 315 aa-0.23□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms