RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 AKIRIN2Q53H80 203 aa-0.49□□□□□ -2.49
RNU6-541P-201ENST00000384709 CASC2Q6XLA1 102 aa-0.49□□□□□ -2.49
RNU6-541P-201ENST00000384709 LRP2P98164 4655 aa-0.49□□□□□ -2.49
RNU6-541P-201ENST00000384709 WDR97A6NE52 1622 aa-0.49□□□□□ -2.49
RNU6-541P-201ENST00000384709 ZANQ9Y493 2812 aa-0.5□□□□□ -2.49
RNU6-541P-201ENST00000384709 PRORSD1PA6NEY8 169 aa-0.5□□□□□ -2.49
RNU6-541P-201ENST00000384709 K7ERJ3 54 aa-0.5□□□□□ -2.49
RNU6-541P-201ENST00000384709 AIPO00170 330 aa-0.5□□□□□ -2.49
RNU6-541P-201ENST00000384709 SULT1C4O75897 302 aa-0.5□□□□□ -2.49
RNU6-541P-201ENST00000384709 CD3DP04234 171 aa-0.5□□□□□ -2.49
RNU6-541P-201ENST00000384709 TMBIM6P55061 237 aa-0.5□□□□□ -2.49
RNU6-541P-201ENST00000384709 SPA17Q15506 151 aa-0.5□□□□□ -2.49
RNU6-541P-201ENST00000384709 KRTAP6-1Q3LI64 71 aa-0.5□□□□□ -2.49
RNU6-541P-201ENST00000384709 SCGB2B2Q4G0G5 96 aa-0.5□□□□□ -2.49
RNU6-541P-201ENST00000384709 IZUMO2Q6UXV1 221 aa-0.5□□□□□ -2.49
RNU6-541P-201ENST00000384709 VMO1Q7Z5L0 202 aa-0.5□□□□□ -2.49
RNU6-541P-201ENST00000384709 FAM216BQ8N7L0 139 aa-0.5□□□□□ -2.49
RNU6-541P-201ENST00000384709 MALSU1Q96EH3 234 aa-0.5□□□□□ -2.49
RNU6-541P-201ENST00000384709 OR2J1Q9GZK6 312 aa-0.5□□□□□ -2.49
RNU6-541P-201ENST00000384709 ENY2Q9NPA8 101 aa-0.5□□□□□ -2.49
RNU6-541P-201ENST00000384709 FAM32AQ9Y421 112 aaKnown RBP-0.5□□□□□ -2.49
RNU6-541P-201ENST00000384709 ZNF142P52746 1687 aaPredicted RBP-0.5□□□□□ -2.49
RNU6-541P-201ENST00000384709 XIRP1Q702N8 1843 aaKnown RBP-0.5□□□□□ -2.49
RNU6-541P-201ENST00000384709 BANF1O75531 89 aa-0.51□□□□□ -2.49
RNU6-541P-201ENST00000384709 CST7O76096 145 aa-0.51□□□□□ -2.49
RNU6-541P-201ENST00000384709 NDUFC2O95298 119 aa-0.51□□□□□ -2.49
RNU6-541P-201ENST00000384709 IFNA14P01570 189 aa-0.51□□□□□ -2.49
RNU6-541P-201ENST00000384709 GYPBP06028 91 aa-0.51□□□□□ -2.49
RNU6-541P-201ENST00000384709 RPS3P23396 243 aaKnown RBP eCLIP-0.51□□□□□ -2.49
RNU6-541P-201ENST00000384709 MYH9P35579 1960 aaKnown RBP-0.51□□□□□ -2.49
RNU6-541P-201ENST00000384709 DIAPH2-AS1Q14236 149 aa-0.51□□□□□ -2.49
RNU6-541P-201ENST00000384709 C1orf140Q5VVS0 124 aa-0.51□□□□□ -2.49
RNU6-541P-201ENST00000384709 C5orf17Q8NAS9 161 aa-0.51□□□□□ -2.49
RNU6-541P-201ENST00000384709 NUP35Q8NFH5 326 aa-0.51□□□□□ -2.49
RNU6-541P-201ENST00000384709 GRPEL2Q8TAA5 225 aa-0.51□□□□□ -2.49
RNU6-541P-201ENST00000384709 LINC00208Q96KT6 92 aa-0.51□□□□□ -2.49
RNU6-541P-201ENST00000384709 C9orf16Q9BUW7 83 aa-0.51□□□□□ -2.49
RNU6-541P-201ENST00000384709 RTL8AQ9BWD3 113 aa-0.51□□□□□ -2.49
RNU6-541P-201ENST00000384709 STAB1Q9NY15 2570 aa-0.51□□□□□ -2.49
RNU6-541P-201ENST00000384709 MRPL35Q9NZE8 188 aaKnown RBP-0.51□□□□□ -2.49
RNU6-541P-201ENST00000384709 NAT8BQ9UHF3 227 aa-0.51□□□□□ -2.49
RNU6-541P-201ENST00000384709 PRNDQ9UKY0 176 aa-0.51□□□□□ -2.49
RNU6-541P-201ENST00000384709 KIDINS220Q9ULH0 1771 aa-0.51□□□□□ -2.49
RNU6-541P-201ENST00000384709 PYCARDQ9ULZ3 195 aa-0.51□□□□□ -2.49
RNU6-541P-201ENST00000384709 LAMC3Q9Y6N6 1575 aa-0.51□□□□□ -2.49
RNU6-541P-201ENST00000384709 FLNAP21333 2647 aaKnown RBP-0.51□□□□□ -2.49
RNU6-541P-201ENST00000384709 PTPRQQ9UMZ3 2332 aa-0.52□□□□□ -2.49
RNU6-541P-201ENST00000384709 KIF13AQ9H1H9 1805 aa-0.52□□□□□ -2.49
RNU6-541P-201ENST00000384709 DSPPQ9NZW4 1301 aa-0.52□□□□□ -2.49
RNU6-541P-201ENST00000384709 OGNP20774 298 aaKnown RBP-0.52□□□□□ -2.49
RNU6-541P-201ENST00000384709 FXYD3Q14802 87 aa-0.52□□□□□ -2.49
RNU6-541P-201ENST00000384709 Q5XG85 94 aa-0.52□□□□□ -2.49
RNU6-541P-201ENST00000384709 C5orf56Q8N8D9 126 aa-0.52□□□□□ -2.49
RNU6-541P-201ENST00000384709 EFCAB11Q9BUY7 163 aa-0.52□□□□□ -2.49
RNU6-541P-201ENST00000384709 OR2H1Q9GZK4 316 aa-0.52□□□□□ -2.49
RNU6-541P-201ENST00000384709 SH3BGRL3Q9H299 93 aa-0.52□□□□□ -2.49
RNU6-541P-201ENST00000384709 U3KQA8 63 aa-0.52□□□□□ -2.49
RNU6-541P-201ENST00000384709 PLCE1Q9P212 2302 aa-0.52□□□□□ -2.49
RNU6-541P-201ENST00000384709 SERPINA1P01009 418 aa-0.53□□□□□ -2.49
RNU6-541P-201ENST00000384709 IGF2P01344 180 aa-0.53□□□□□ -2.49
RNU6-541P-201ENST00000384709 RPL35P42766 123 aaKnown RBP-0.53□□□□□ -2.49
RNU6-541P-201ENST00000384709 HBBP68871 147 aa-0.53□□□□□ -2.49
RNU6-541P-201ENST00000384709 ITGB3BPQ13352 177 aaPredicted RBP-0.53□□□□□ -2.49
RNU6-541P-201ENST00000384709 MSMO1Q15800 293 aa-0.53□□□□□ -2.49
RNU6-541P-201ENST00000384709 PPP1R14BQ96C90 147 aa-0.53□□□□□ -2.49
RNU6-541P-201ENST00000384709 MCEEQ96PE7 176 aa-0.53□□□□□ -2.49
RNU6-541P-201ENST00000384709 ARL2BPQ9Y2Y0 163 aa-0.53□□□□□ -2.49
RNU6-541P-201ENST00000384709 TNXBP22105 4242 aa-0.53□□□□□ -2.49
RNU6-541P-201ENST00000384709 HSPG2P98160 4391 aa-0.53□□□□□ -2.49
RNU6-541P-201ENST00000384709 ZNF292O60281 2723 aa-0.53□□□□□ -2.49
RNU6-541P-201ENST00000384709 LPAP08519 4548 aa-0.54□□□□□ -2.5
RNU6-541P-201ENST00000384709 MYH13Q9UKX3 1938 aa-0.54□□□□□ -2.5
RNU6-541P-201ENST00000384709 TRAPPC8Q9Y2L5 1435 aa-0.54□□□□□ -2.5
RNU6-541P-201ENST00000384709 PKD1L1Q8TDX9 2849 aa-0.54□□□□□ -2.5
RNU6-541P-201ENST00000384709 H7C1C5 153 aa-0.54□□□□□ -2.5
RNU6-541P-201ENST00000384709 LCN6P62502 163 aa-0.54□□□□□ -2.5
RNU6-541P-201ENST00000384709 ZNF56Q15929 161 aa-0.54□□□□□ -2.5
RNU6-541P-201ENST00000384709 IFT20Q8IY31 132 aa-0.54□□□□□ -2.5
RNU6-541P-201ENST00000384709 DIRC1Q969H9 104 aa-0.54□□□□□ -2.5
RNU6-541P-201ENST00000384709 OR4C12Q96R67 309 aa-0.54□□□□□ -2.5
RNU6-541P-201ENST00000384709 LYRM2Q9NU23 88 aaPredicted RBP-0.54□□□□□ -2.5
RNU6-541P-201ENST00000384709 TPRKBQ9Y3C4 175 aa-0.54□□□□□ -2.5
RNU6-541P-201ENST00000384709 AKAP6Q13023 2319 aa-0.54□□□□□ -2.5
RNU6-541P-201ENST00000384709 SPTBN2O15020 2390 aa-0.55□□□□□ -2.5
RNU6-541P-201ENST00000384709 PKDREJQ9NTG1 2253 aa-0.55□□□□□ -2.5
RNU6-541P-201ENST00000384709 LOC107984156A0A0G2JMH3 177 aa-0.55□□□□□ -2.5
RNU6-541P-201ENST00000384709 RIIAD1A6NNX1 92 aa-0.55□□□□□ -2.5
RNU6-541P-201ENST00000384709 G3V2T6 193 aa-0.55□□□□□ -2.5
RNU6-541P-201ENST00000384709 IFNA6P05013 189 aa-0.55□□□□□ -2.5
RNU6-541P-201ENST00000384709 GNG5P63218 68 aa-0.55□□□□□ -2.5
RNU6-541P-201ENST00000384709 NEDD8Q15843 81 aa-0.55□□□□□ -2.5
RNU6-541P-201ENST00000384709 VMA21Q3ZAQ7 101 aa-0.55□□□□□ -2.5
RNU6-541P-201ENST00000384709 ARL17AQ8IVW1 177 aa-0.55□□□□□ -2.5
RNU6-541P-201ENST00000384709 PAIP2Q9BPZ3 127 aaKnown RBP-0.55□□□□□ -2.5
RNU6-541P-201ENST00000384709 TAF9BQ9HBM6 251 aa-0.55□□□□□ -2.5
RNU6-541P-201ENST00000384709 PHIPQ8WWQ0 1821 aa-0.55□□□□□ -2.5
RNU6-541P-201ENST00000384709 LAMB1P07942 1786 aa-0.55□□□□□ -2.5
RNU6-541P-201ENST00000384709 TCOF1Q13428 1488 aaKnown RBP-0.55□□□□□ -2.5
RNU6-541P-201ENST00000384709 DCHS2Q6V1P9 2916 aa-0.55□□□□□ -2.5
RNU6-541P-201ENST00000384709 CSMD3Q7Z407 3707 aa-0.55□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms