RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 CFAP53Q96M91 514 aa-2.16□□□□□ -2.76
RNU6-540P-201ENST00000384622 SLC29A1Q99808 456 aa-2.16□□□□□ -2.76
RNU6-540P-201ENST00000384622 MED18Q9BUE0 208 aa-2.16□□□□□ -2.76
RNU6-540P-201ENST00000384622 CCDC32Q9BV29 185 aa-2.16□□□□□ -2.76
RNU6-540P-201ENST00000384622 TMEM147Q9BVK8 224 aa-2.16□□□□□ -2.76
RNU6-540P-201ENST00000384622 IDI2Q9BXS1 227 aa-2.16□□□□□ -2.76
RNU6-540P-201ENST00000384622 GOLPH3Q9H4A6 298 aa-2.16□□□□□ -2.76
RNU6-540P-201ENST00000384622 PGAP2Q9UHJ9 254 aa-2.16□□□□□ -2.76
RNU6-540P-201ENST00000384622 NOP16Q9Y3C1 178 aaKnown RBP-2.16□□□□□ -2.76
RNU6-540P-201ENST00000384622 HDGFL3Q9Y3E1 203 aa-2.16□□□□□ -2.76
RNU6-540P-201ENST00000384622 LRRC9Q6ZRR7 1453 aa-2.16□□□□□ -2.76
RNU6-540P-201ENST00000384622 NWD1Q149M9 1564 aa-2.16□□□□□ -2.76
RNU6-540P-201ENST00000384622 ABCC1P33527 1531 aa-2.17□□□□□ -2.76
RNU6-540P-201ENST00000384622 MYH1P12882 1939 aa-2.17□□□□□ -2.76
RNU6-540P-201ENST00000384622 FANCAO15360 1455 aa-2.17□□□□□ -2.76
RNU6-540P-201ENST00000384622 TRAV38-1A0A0B4J264 116 aa-2.17□□□□□ -2.76
RNU6-540P-201ENST00000384622 LRRIQ3A6PVS8 624 aaPredicted RBP-2.17□□□□□ -2.76
RNU6-540P-201ENST00000384622 NDUFA4O00483 81 aa-2.17□□□□□ -2.76
RNU6-540P-201ENST00000384622 CA2P00918 260 aa-2.17□□□□□ -2.76
RNU6-540P-201ENST00000384622 STATHP02808 62 aa-2.17□□□□□ -2.76
RNU6-540P-201ENST00000384622 RHOCP08134 193 aa-2.17□□□□□ -2.76
RNU6-540P-201ENST00000384622 CCNB1P14635 433 aa-2.17□□□□□ -2.76
RNU6-540P-201ENST00000384622 ARF4P18085 180 aaPredicted RBP-2.17□□□□□ -2.76
RNU6-540P-201ENST00000384622 PLA2G16P53816 162 aa-2.17□□□□□ -2.76
RNU6-540P-201ENST00000384622 HADHBP55084 474 aaKnown RBP-2.17□□□□□ -2.76
RNU6-540P-201ENST00000384622 UBE2NP61088 152 aaKnown RBP-2.17□□□□□ -2.76
RNU6-540P-201ENST00000384622 STX1BP61266 288 aa-2.17□□□□□ -2.76
RNU6-540P-201ENST00000384622 RHOAP61586 193 aa-2.17□□□□□ -2.76
RNU6-540P-201ENST00000384622 H3F3AP84243 136 aa-2.17□□□□□ -2.76
RNU6-540P-201ENST00000384622 KRR1Q13601 381 aaKnown RBP-2.17□□□□□ -2.76
RNU6-540P-201ENST00000384622 QPRTQ15274 297 aa-2.17□□□□□ -2.76
RNU6-540P-201ENST00000384622 SLC36A3Q495N2 470 aa-2.17□□□□□ -2.76
RNU6-540P-201ENST00000384622 HSD17B12Q53GQ0 312 aa-2.17□□□□□ -2.76
RNU6-540P-201ENST00000384622 TMEM128Q5BJH2 165 aa-2.17□□□□□ -2.76
RNU6-540P-201ENST00000384622 SPANXN5Q5MJ07 72 aa-2.17□□□□□ -2.76
RNU6-540P-201ENST00000384622 TPTE2P1Q5T6R2 138 aa-2.17□□□□□ -2.76
RNU6-540P-201ENST00000384622 CYP2G1PQ6ZSU1 146 aa-2.17□□□□□ -2.76
RNU6-540P-201ENST00000384622 TRMT10CQ7L0Y3 403 aaKnown RBP-2.17□□□□□ -2.76
RNU6-540P-201ENST00000384622 PDCL2Q8N4E4 241 aa-2.17□□□□□ -2.76
RNU6-540P-201ENST00000384622 OR56B4Q8NH76 319 aa-2.17□□□□□ -2.76
RNU6-540P-201ENST00000384622 GHSRQ92847 366 aa-2.17□□□□□ -2.76
RNU6-540P-201ENST00000384622 C12orf66Q96MD2 445 aa-2.17□□□□□ -2.76
RNU6-540P-201ENST00000384622 MGST2Q99735 147 aa-2.17□□□□□ -2.76
RNU6-540P-201ENST00000384622 EBNA1BP2Q99848 306 aaKnown RBP-2.17□□□□□ -2.76
RNU6-540P-201ENST00000384622 LLPHQ9BRT6 129 aaKnown RBP-2.17□□□□□ -2.76
RNU6-540P-201ENST00000384622 ERP44Q9BS26 406 aa-2.17□□□□□ -2.76
RNU6-540P-201ENST00000384622 AP1M1Q9BXS5 423 aa-2.17□□□□□ -2.76
RNU6-540P-201ENST00000384622 SLC7A5P2Q9GIP4 190 aa-2.17□□□□□ -2.76
RNU6-540P-201ENST00000384622 SLC17A5Q9NRA2 495 aa-2.17□□□□□ -2.76
RNU6-540P-201ENST00000384622 MRPL17Q9NRX2 175 aaKnown RBP-2.17□□□□□ -2.76
RNU6-540P-201ENST00000384622 GPR173Q9NS66 373 aa-2.17□□□□□ -2.76
RNU6-540P-201ENST00000384622 TMCO1Q9UM00 188 aa-2.17□□□□□ -2.76
RNU6-540P-201ENST00000384622 MYO3AQ8NEV4 1616 aa-2.17□□□□□ -2.76
RNU6-540P-201ENST00000384622 RALGAPBQ86X10 1494 aa-2.18□□□□□ -2.76
RNU6-540P-201ENST00000384622 TRBV7-6A0A0J9YX20 115 aa-2.18□□□□□ -2.76
RNU6-540P-201ENST00000384622 TCRBV3S1A0A5B6 114 aa-2.18□□□□□ -2.76
RNU6-540P-201ENST00000384622 H7C1C5 153 aa-2.18□□□□□ -2.76
RNU6-540P-201ENST00000384622 H7C2Y5 167 aa-2.18□□□□□ -2.76
RNU6-540P-201ENST00000384622 HPGDSO60760 199 aa-2.18□□□□□ -2.76
RNU6-540P-201ENST00000384622 AGTP01019 485 aa-2.18□□□□□ -2.76
RNU6-540P-201ENST00000384622 CYBAP13498 195 aa-2.18□□□□□ -2.76
RNU6-540P-201ENST00000384622 CSNK2A2P19784 350 aaPredicted RBP-2.18□□□□□ -2.76
RNU6-540P-201ENST00000384622 CDK2P24941 298 aa-2.18□□□□□ -2.76
RNU6-540P-201ENST00000384622 HPCAL1P37235 193 aa-2.18□□□□□ -2.76
RNU6-540P-201ENST00000384622 AQP2P41181 271 aa-2.18□□□□□ -2.76
RNU6-540P-201ENST00000384622 TAS2R30P59541 319 aa-2.18□□□□□ -2.76
RNU6-540P-201ENST00000384622 MLLT11Q13015 90 aaPredicted RBP-2.18□□□□□ -2.76
RNU6-540P-201ENST00000384622 CDC37Q16543 378 aaPredicted RBP-2.18□□□□□ -2.76
RNU6-540P-201ENST00000384622 HADHQ16836 314 aaKnown RBP-2.18□□□□□ -2.76
RNU6-540P-201ENST00000384622 RGS21Q2M5E4 152 aa-2.18□□□□□ -2.76
RNU6-540P-201ENST00000384622 C11orf88Q6PI97 169 aa-2.18□□□□□ -2.76
RNU6-540P-201ENST00000384622 DEFB128Q7Z7B8 93 aa-2.18□□□□□ -2.76
RNU6-540P-201ENST00000384622 WFDC10BQ8IUB3 73 aa-2.18□□□□□ -2.76
RNU6-540P-201ENST00000384622 KRT222Q8N1A0 295 aa-2.18□□□□□ -2.76
RNU6-540P-201ENST00000384622 TMEM86BQ8N661 226 aa-2.18□□□□□ -2.76
RNU6-540P-201ENST00000384622 OR10J6PQ8NGY7 276 aa-2.18□□□□□ -2.76
RNU6-540P-201ENST00000384622 PSMA8Q8TAA3 256 aa-2.18□□□□□ -2.76
RNU6-540P-201ENST00000384622 TMEM254Q8TBM7 123 aa-2.18□□□□□ -2.76
RNU6-540P-201ENST00000384622 ORAOV1Q8WV07 137 aa-2.18□□□□□ -2.76
RNU6-540P-201ENST00000384622 SMIM4Q8WVI0 70 aa-2.18□□□□□ -2.76
RNU6-540P-201ENST00000384622 SLC38A4Q969I6 547 aa-2.18□□□□□ -2.76
RNU6-540P-201ENST00000384622 RAB39BQ96DA2 213 aa-2.18□□□□□ -2.76
RNU6-540P-201ENST00000384622 CERS2Q96G23 380 aa-2.18□□□□□ -2.76
RNU6-540P-201ENST00000384622 CYTH2Q99418 400 aa-2.18□□□□□ -2.76
RNU6-540P-201ENST00000384622 MGLLQ99685 303 aa-2.18□□□□□ -2.76
RNU6-540P-201ENST00000384622 MRPL1Q9BYD6 325 aaKnown RBP-2.18□□□□□ -2.76
RNU6-540P-201ENST00000384622 WDR61Q9GZS3 305 aaKnown RBP-2.18□□□□□ -2.76
RNU6-540P-201ENST00000384622 IL26Q9NPH9 171 aa-2.18□□□□□ -2.76
RNU6-540P-201ENST00000384622 NMRK1Q9NWW6 199 aa-2.18□□□□□ -2.76
RNU6-540P-201ENST00000384622 TAS2R8Q9NYW2 309 aa-2.18□□□□□ -2.76
RNU6-540P-201ENST00000384622 IL19Q9UHD0 177 aa-2.18□□□□□ -2.76
RNU6-540P-201ENST00000384622 OR51B2Q9Y5P1 312 aa-2.18□□□□□ -2.76
RNU6-540P-201ENST00000384622 MYH4Q9Y623 1939 aa-2.19□□□□□ -2.76
RNU6-540P-201ENST00000384622 NCAPD3P42695 1498 aa-2.19□□□□□ -2.76
RNU6-540P-201ENST00000384622 SYNJ2BP-COX16A0A087WUM0 186 aa-2.19□□□□□ -2.76
RNU6-540P-201ENST00000384622 H3BN98 237 aa-2.19□□□□□ -2.76
RNU6-540P-201ENST00000384622 H3BT86 120 aa-2.19□□□□□ -2.76
RNU6-540P-201ENST00000384622 TXNDC9O14530 226 aa-2.19□□□□□ -2.76
RNU6-540P-201ENST00000384622 RGS5O15539 181 aa-2.19□□□□□ -2.76
RNU6-540P-201ENST00000384622 RNF13O43567 381 aa-2.19□□□□□ -2.76
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms