RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 ROS1P08922 2347 aa10.84□□□□□ -0.67
GPC6-201ENST00000377047 IGHV4-61A0A0C4DH41 118 aa10.84□□□□□ -0.67
GPC6-201ENST00000377047 NRGNQ92686 78 aa10.84□□□□□ -0.67
GPC6-201ENST00000377047 GFRA4Q9GZZ7 299 aa10.84□□□□□ -0.67
GPC6-201ENST00000377047 KAAG1Q9UBP8 84 aa10.84□□□□□ -0.67
GPC6-201ENST00000377047 NUP210Q8TEM1 1887 aaPredicted RBP10.84□□□□□ -0.67
GPC6-201ENST00000377047 H3BRN7 92 aa10.84□□□□□ -0.67
GPC6-201ENST00000377047 ANXA2RQ3ZCQ2 193 aa10.84□□□□□ -0.67
GPC6-201ENST00000377047 TRAV8-4A0A0B4J246 113 aa10.84□□□□□ -0.67
GPC6-201ENST00000377047 hDV102S1A0JD36 115 aa10.84□□□□□ -0.67
GPC6-201ENST00000377047 A8MWV9 139 aa10.84□□□□□ -0.67
GPC6-201ENST00000377047 RSPO1Q2MKA7 263 aaPredicted RBP10.84□□□□□ -0.67
GPC6-201ENST00000377047 ZNRF2Q8NHG8 242 aa10.84□□□□□ -0.67
GPC6-201ENST00000377047 GAGE6Q13070 117 aa10.84□□□□□ -0.67
GPC6-201ENST00000377047 GUSBP1Q15486 140 aa10.84□□□□□ -0.67
GPC6-201ENST00000377047 CCL24O00175 119 aa10.83□□□□□ -0.68
GPC6-201ENST00000377047 IGFBPL1Q8WX77 278 aa10.83□□□□□ -0.68
GPC6-201ENST00000377047 DEFB136Q30KP8 78 aa10.83□□□□□ -0.68
GPC6-201ENST00000377047 IGF2-ASQ6U949 168 aa10.83□□□□□ -0.68
GPC6-201ENST00000377047 IGFL2Q6UWQ7 119 aa10.83□□□□□ -0.68
GPC6-201ENST00000377047 CTSZQ9UBR2 303 aa10.83□□□□□ -0.68
GPC6-201ENST00000377047 TP53TG1Q9Y2A0 90 aa10.83□□□□□ -0.68
GPC6-201ENST00000377047 IGF2BP2-AS1Q96M15 143 aa10.83□□□□□ -0.68
GPC6-201ENST00000377047 I3L3M4 83 aa10.83□□□□□ -0.68
GPC6-201ENST00000377047 PKDREJQ9NTG1 2253 aa10.82□□□□□ -0.68
GPC6-201ENST00000377047 CFPP27918 469 aa10.82□□□□□ -0.68
GPC6-201ENST00000377047 SAMD5Q5TGI4 173 aa10.82□□□□□ -0.68
GPC6-201ENST00000377047 LURAP1LQ8IV03 231 aa10.82□□□□□ -0.68
GPC6-201ENST00000377047 HIST3H2BBQ8N257 126 aa10.82□□□□□ -0.68
GPC6-201ENST00000377047 TMEM256Q8N2U0 113 aa10.82□□□□□ -0.68
GPC6-201ENST00000377047 ZNF625Q96I27 306 aaPredicted RBP10.82□□□□□ -0.68
GPC6-201ENST00000377047 KLF2Q9Y5W3 355 aaPredicted RBP10.82□□□□□ -0.68
GPC6-201ENST00000377047 IGHV4-38-2P0DP08 117 aa10.82□□□□□ -0.68
GPC6-201ENST00000377047 C1orf147Q96MC9 270 aaPredicted RBP10.82□□□□□ -0.68
GPC6-201ENST00000377047 VWC2Q2TAL6 325 aa10.82□□□□□ -0.68
GPC6-201ENST00000377047 IGKV1-39P01597 117 aa10.81□□□□□ -0.68
GPC6-201ENST00000377047 IGKV1D-39P04432 117 aa10.81□□□□□ -0.68
GPC6-201ENST00000377047 BCL6BQ8N143 479 aaPredicted RBP10.81□□□□□ -0.68
GPC6-201ENST00000377047 TMEM243Q9BU79 118 aa10.81□□□□□ -0.68
GPC6-201ENST00000377047 ZNF492Q9P255 531 aa10.81□□□□□ -0.68
GPC6-201ENST00000377047 CGB7P0DN87 165 aa10.81□□□□□ -0.68
GPC6-201ENST00000377047 SPRNQ5BIV9 151 aa10.81□□□□□ -0.68
GPC6-201ENST00000377047 THAP8Q8NA92 274 aa10.81□□□□□ -0.68
GPC6-201ENST00000377047 COLCA2A8K830 154 aa10.81□□□□□ -0.68
GPC6-201ENST00000377047 PRSS46E5RG02 174 aa10.81□□□□□ -0.68
GPC6-201ENST00000377047 HOXD3P31249 432 aaPredicted RBP10.81□□□□□ -0.68
GPC6-201ENST00000377047 ADORA2A-AS1P86434 159 aa10.81□□□□□ -0.68
GPC6-201ENST00000377047 NOTCH4Q99466 2003 aa10.81□□□□□ -0.68
GPC6-201ENST00000377047 TRAV26-2A0A0B4J265 109 aa10.8□□□□□ -0.68
GPC6-201ENST00000377047 H3BUA1 57 aa10.8□□□□□ -0.68
GPC6-201ENST00000377047 DOPEY2Q9Y3R5 2298 aa10.8□□□□□ -0.68
GPC6-201ENST00000377047 MEGF9Q9H1U4 602 aa10.8□□□□□ -0.68
GPC6-201ENST00000377047 VWC2LB2RUY7 222 aa10.8□□□□□ -0.68
GPC6-201ENST00000377047 UBE2CO00762 179 aa10.8□□□□□ -0.68
GPC6-201ENST00000377047 SYS1-DBNDD2H3BUS1 97 aa10.79□□□□□ -0.68
GPC6-201ENST00000377047 ZC2HC1BQ5TFG8 222 aa10.79□□□□□ -0.68
GPC6-201ENST00000377047 NKAPP1Q8N9T2 125 aa10.79□□□□□ -0.68
GPC6-201ENST00000377047 RMI2Q96E14 147 aa10.79□□□□□ -0.68
GPC6-201ENST00000377047 DLX4Q92988 240 aaPredicted RBP10.79□□□□□ -0.68
GPC6-201ENST00000377047 ESDP10768 282 aa10.79□□□□□ -0.68
GPC6-201ENST00000377047 HAPLN4Q86UW8 402 aa10.79□□□□□ -0.68
GPC6-201ENST00000377047 CADP27708 2225 aa10.79□□□□□ -0.68
GPC6-201ENST00000377047 PMVKQ15126 192 aa10.79□□□□□ -0.68
GPC6-201ENST00000377047 PRR25Q96S07 402 aa10.79□□□□□ -0.68
GPC6-201ENST00000377047 NAA38Q9BRA0 125 aaKnown RBP10.79□□□□□ -0.68
GPC6-201ENST00000377047 PFN2P35080 140 aa10.79□□□□□ -0.68
GPC6-201ENST00000377047 MTURNQ8N3F0 131 aa10.79□□□□□ -0.68
GPC6-201ENST00000377047 NDUFAF3Q9BU61 184 aa10.79□□□□□ -0.68
GPC6-201ENST00000377047 ANAPC10Q9UM13 185 aa10.79□□□□□ -0.68
GPC6-201ENST00000377047 DOCK9Q9BZ29 2069 aa10.79□□□□□ -0.68
GPC6-201ENST00000377047 C3orf79P0CE67 100 aa10.78□□□□□ -0.68
GPC6-201ENST00000377047 CYYR1Q96J86 154 aa10.78□□□□□ -0.68
GPC6-201ENST00000377047 TMEM14CQ9P0S9 112 aa10.78□□□□□ -0.68
GPC6-201ENST00000377047 LGALS1P09382 135 aaKnown RBP10.78□□□□□ -0.68
GPC6-201ENST00000377047 A0A0J9YY99 117 aa10.78□□□□□ -0.68
GPC6-201ENST00000377047 C9orf66Q5T8R8 295 aa10.78□□□□□ -0.68
GPC6-201ENST00000377047 RSPO3Q9BXY4 272 aaPredicted RBP10.78□□□□□ -0.68
GPC6-201ENST00000377047 IGLC1P0CG04 106 aa10.78□□□□□ -0.68
GPC6-201ENST00000377047 SLURP1P55000 103 aa10.78□□□□□ -0.68
GPC6-201ENST00000377047 CHAC1Q9BUX1 264 aa10.78□□□□□ -0.68
GPC6-201ENST00000377047 CLPSL2Q6UWE3 100 aa10.78□□□□□ -0.68
GPC6-201ENST00000377047 ZNF114Q8NC26 417 aa10.77□□□□□ -0.68
GPC6-201ENST00000377047 NOP10Q9NPE3 64 aaKnown RBP10.77□□□□□ -0.68
GPC6-201ENST00000377047 SDHAF1A6NFY7 115 aa10.77□□□□□ -0.69
GPC6-201ENST00000377047 A0A087X0K7 114 aa10.77□□□□□ -0.69
GPC6-201ENST00000377047 NEGR1Q7Z3B1 354 aa10.77□□□□□ -0.69
GPC6-201ENST00000377047 CENPVL3A0A0U1RRI6 287 aa10.77□□□□□ -0.69
GPC6-201ENST00000377047 ANGP03950 147 aaKnown RBP10.77□□□□□ -0.69
GPC6-201ENST00000377047 C2orf66Q6UXQ4 117 aa10.77□□□□□ -0.69
GPC6-201ENST00000377047 TMEM141Q96I45 108 aa10.77□□□□□ -0.69
GPC6-201ENST00000377047 KLF12Q9Y4X4 402 aa10.77□□□□□ -0.69
GPC6-201ENST00000377047 FAM104BQ5XKR9 115 aa10.76□□□□□ -0.69
GPC6-201ENST00000377047 C11orf53Q8IXP5 236 aa10.76□□□□□ -0.69
GPC6-201ENST00000377047 DKK4Q9UBT3 224 aa10.76□□□□□ -0.69
GPC6-201ENST00000377047 FOXI2Q6ZQN5 318 aa10.76□□□□□ -0.69
GPC6-201ENST00000377047 F6UB75 175 aa10.76□□□□□ -0.69
GPC6-201ENST00000377047 HLA-DRB4P13762 266 aa10.76□□□□□ -0.69
GPC6-201ENST00000377047 ATP6V0BQ99437 205 aa10.76□□□□□ -0.69
GPC6-201ENST00000377047 HLA-DRB4X5D2U9 266 aa10.76□□□□□ -0.69
GPC6-201ENST00000377047 KIF26AQ9ULI4 1882 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms