RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 ORM1P02763 201 aa19.6■□□□□ 0.73
C9orf40-201ENST00000376854 VAMP3Q15836 100 aa19.6■□□□□ 0.73
C9orf40-201ENST00000376854 ZNF575Q86XF7 245 aa19.6■□□□□ 0.73
C9orf40-201ENST00000376854 DEFB125Q8N687 156 aa19.6■□□□□ 0.73
C9orf40-201ENST00000376854 NPYP01303 97 aa19.6■□□□□ 0.73
C9orf40-201ENST00000376854 HBDP02042 147 aa19.59■□□□□ 0.73
C9orf40-201ENST00000376854 RHOGP84095 191 aa19.59■□□□□ 0.73
C9orf40-201ENST00000376854 ERCC8Q13216 396 aa19.59■□□□□ 0.73
C9orf40-201ENST00000376854 CLEC3BP05452 202 aa19.59■□□□□ 0.73
C9orf40-201ENST00000376854 ERASQ7Z444 233 aa19.59■□□□□ 0.73
C9orf40-201ENST00000376854 PIP4P2Q8N4L2 257 aa19.59■□□□□ 0.73
C9orf40-201ENST00000376854 SRSF2Q01130 221 aaKnown RBP19.58■□□□□ 0.73
C9orf40-201ENST00000376854 PAX8Q06710 450 aa19.58■□□□□ 0.73
C9orf40-201ENST00000376854 ZFAND3Q9H8U3 227 aa19.58■□□□□ 0.73
C9orf40-201ENST00000376854 FABP5P3A8MUU1 101 aa19.58■□□□□ 0.72
C9orf40-201ENST00000376854 ATP6V0E1O15342 81 aa19.58■□□□□ 0.72
C9orf40-201ENST00000376854 SNAI2O43623 268 aa19.58■□□□□ 0.72
C9orf40-201ENST00000376854 LGALS9BQ3B8N2 356 aa19.58■□□□□ 0.72
C9orf40-201ENST00000376854 LGALS9CQ6DKI2 356 aa19.58■□□□□ 0.72
C9orf40-201ENST00000376854 C2orf91Q6ZV80 131 aa19.58■□□□□ 0.72
C9orf40-201ENST00000376854 PRAC2D3DTV9 90 aa19.57■□□□□ 0.72
C9orf40-201ENST00000376854 MSRB1Q9NZV6 116 aa19.57■□□□□ 0.72
C9orf40-201ENST00000376854 CBY1Q9Y3M2 126 aa19.57■□□□□ 0.72
C9orf40-201ENST00000376854 BUB3O43684 328 aa19.57■□□□□ 0.72
C9orf40-201ENST00000376854 CACNG7P62955 275 aa19.57■□□□□ 0.72
C9orf40-201ENST00000376854 AJUBAQ96IF1 538 aa19.57■□□□□ 0.72
C9orf40-201ENST00000376854 AKAP6Q13023 2319 aa19.56■□□□□ 0.72
C9orf40-201ENST00000376854 SFTPCP11686 197 aa19.56■□□□□ 0.72
C9orf40-201ENST00000376854 RAB9AP51151 201 aa19.56■□□□□ 0.72
C9orf40-201ENST00000376854 UBE2E1P51965 193 aa19.56■□□□□ 0.72
C9orf40-201ENST00000376854 FOXE3Q13461 319 aa19.56■□□□□ 0.72
C9orf40-201ENST00000376854 RNF182Q8N6D2 247 aa19.56■□□□□ 0.72
C9orf40-201ENST00000376854 ANKRD39Q53RE8 183 aa19.56■□□□□ 0.72
C9orf40-201ENST00000376854 OR4C5Q8NGB2 326 aa19.56■□□□□ 0.72
C9orf40-201ENST00000376854 DPF1Q92782 380 aa19.56■□□□□ 0.72
C9orf40-201ENST00000376854 GOSR1O95249 250 aa19.55■□□□□ 0.72
C9orf40-201ENST00000376854 IGHV3-66A0A0C4DH42 116 aa19.54■□□□□ 0.72
C9orf40-201ENST00000376854 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa19.54■□□□□ 0.72
C9orf40-201ENST00000376854 RNF185Q96GF1 192 aa19.54■□□□□ 0.72
C9orf40-201ENST00000376854 PSMG3-AS1Q96PY0 264 aa19.54■□□□□ 0.72
C9orf40-201ENST00000376854 CNFNQ9BYD5 112 aa19.54■□□□□ 0.72
C9orf40-201ENST00000376854 CBY3A6NI87 242 aa19.54■□□□□ 0.72
C9orf40-201ENST00000376854 PRSS57Q6UWY2 283 aa19.54■□□□□ 0.72
C9orf40-201ENST00000376854 IFI27L1Q96BM0 104 aa19.54■□□□□ 0.72
C9orf40-201ENST00000376854 SAA4P35542 130 aa19.53■□□□□ 0.72
C9orf40-201ENST00000376854 CLEC19AQ6UXS0 136 aa19.53■□□□□ 0.72
C9orf40-201ENST00000376854 UBTD1Q9HAC8 227 aa19.53■□□□□ 0.72
C9orf40-201ENST00000376854 CD5LO43866 347 aa19.53■□□□□ 0.72
C9orf40-201ENST00000376854 FGF6P10767 208 aa19.53■□□□□ 0.72
C9orf40-201ENST00000376854 KLK9Q2XQG4 91 aa19.53■□□□□ 0.72
C9orf40-201ENST00000376854 IL17RELQ6ZVW7 336 aa19.53■□□□□ 0.72
C9orf40-201ENST00000376854 CCDC140Q96MF4 163 aa19.53■□□□□ 0.72
C9orf40-201ENST00000376854 KLK9Q9UKQ9 250 aa19.53■□□□□ 0.72
C9orf40-201ENST00000376854 CLPSL1A2RUU4 121 aa19.52■□□□□ 0.72
C9orf40-201ENST00000376854 RBAKDNA6NC62 111 aa19.52■□□□□ 0.72
C9orf40-201ENST00000376854 LINC01559Q495D7 138 aa19.52■□□□□ 0.72
C9orf40-201ENST00000376854 OR1N2Q8NGR9 330 aa19.52■□□□□ 0.72
C9orf40-201ENST00000376854 SLC50A1Q9BRV3 221 aa19.52■□□□□ 0.72
C9orf40-201ENST00000376854 G3V318 75 aa19.52■□□□□ 0.71
C9orf40-201ENST00000376854 RNASE8Q8TDE3 154 aaKnown RBP19.52■□□□□ 0.71
C9orf40-201ENST00000376854 MAP1LC3AQ9H492 121 aa19.52■□□□□ 0.71
C9orf40-201ENST00000376854 IGHV3OR16-13A0A075B7E8 117 aa19.51■□□□□ 0.71
C9orf40-201ENST00000376854 IGHV3-74A0A0B4J1X5 117 aa19.51■□□□□ 0.71
C9orf40-201ENST00000376854 PPBPP02775 128 aa19.51■□□□□ 0.71
C9orf40-201ENST00000376854 LINC01548A6NM66 108 aa19.5■□□□□ 0.71
C9orf40-201ENST00000376854 K7EP13 123 aa19.5■□□□□ 0.71
C9orf40-201ENST00000376854 PPIFP30405 207 aaKnown RBP19.5■□□□□ 0.71
C9orf40-201ENST00000376854 GAS8-AS1O95177 125 aa19.49■□□□□ 0.71
C9orf40-201ENST00000376854 TCTAP57738 103 aa19.49■□□□□ 0.71
C9orf40-201ENST00000376854 WFDC3Q8IUB2 231 aa19.49■□□□□ 0.71
C9orf40-201ENST00000376854 UQCRFS1P47985 274 aa19.48■□□□□ 0.71
C9orf40-201ENST00000376854 TMEM97Q5BJF2 176 aa19.48■□□□□ 0.71
C9orf40-201ENST00000376854 EEF1AKMT3Q96AZ1 226 aa19.48■□□□□ 0.71
C9orf40-201ENST00000376854 AGPAT4-IT1Q9H0P7 198 aa19.48■□□□□ 0.71
C9orf40-201ENST00000376854 EFNA4P52798 201 aa19.47■□□□□ 0.71
C9orf40-201ENST00000376854 BOD1L2Q8IYS8 172 aa19.47■□□□□ 0.71
C9orf40-201ENST00000376854 NPFFR1Q9GZQ6 430 aa19.47■□□□□ 0.71
C9orf40-201ENST00000376854 IGHV3-49A0A0A0MS15 119 aa19.47■□□□□ 0.71
C9orf40-201ENST00000376854 CENPVL3A0A0U1RRI6 287 aa19.47■□□□□ 0.71
C9orf40-201ENST00000376854 AMMECR1LQ6DCA0 310 aa19.47■□□□□ 0.71
C9orf40-201ENST00000376854 IGKV3D-20A0A0C4DH25 116 aa19.46■□□□□ 0.71
C9orf40-201ENST00000376854 ZNF207O43670 478 aaKnown RBP19.46■□□□□ 0.71
C9orf40-201ENST00000376854 TNFRSF6BO95407 300 aa19.46■□□□□ 0.71
C9orf40-201ENST00000376854 METTL26Q96S19 204 aa19.46■□□□□ 0.71
C9orf40-201ENST00000376854 LINC01546A6NGU7 62 aa19.46■□□□□ 0.71
C9orf40-201ENST00000376854 C19orf84I3L1E1 186 aa19.46■□□□□ 0.71
C9orf40-201ENST00000376854 SEC11AP67812 179 aa19.46■□□□□ 0.71
C9orf40-201ENST00000376854 C18orf15Q96N68 181 aa19.46■□□□□ 0.71
C9orf40-201ENST00000376854 VPS13CQ709C8 3753 aa19.45■□□□□ 0.7
C9orf40-201ENST00000376854 TRBV7-1A0A0A6YYK4 115 aa19.45■□□□□ 0.7
C9orf40-201ENST00000376854 TRAV8-2A0A0B4J237 113 aa19.45■□□□□ 0.7
C9orf40-201ENST00000376854 EVI2AP22794 236 aa19.45■□□□□ 0.7
C9orf40-201ENST00000376854 LMO4P61968 165 aa19.45■□□□□ 0.7
C9orf40-201ENST00000376854 BPESC1Q9GZL8 116 aa19.45■□□□□ 0.7
C9orf40-201ENST00000376854 CACNA1BQ00975 2339 aa19.45■□□□□ 0.7
C9orf40-201ENST00000376854 SMAD7O15105 426 aaKnown RBP19.45■□□□□ 0.7
C9orf40-201ENST00000376854 LEPP41159 167 aa19.45■□□□□ 0.7
C9orf40-201ENST00000376854 NXT2Q9NPJ8 142 aaKnown RBP19.45■□□□□ 0.7
C9orf40-201ENST00000376854 C11orf21Q9P2W6 132 aa19.45■□□□□ 0.7
C9orf40-201ENST00000376854 DKK2Q9UBU2 259 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms