RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 NPSP0C0P6 89 aa13.91□□□□□ -0.18
TRAF3IP1-201ENST00000373327 TP53TG3Q9ULZ0 132 aa13.91□□□□□ -0.18
TRAF3IP1-201ENST00000373327 NDUFA3O95167 84 aa13.91□□□□□ -0.18
TRAF3IP1-201ENST00000373327 GDF5OSQ5U4N7 250 aa13.91□□□□□ -0.18
TRAF3IP1-201ENST00000373327 SFTA2Q6UW10 78 aa13.91□□□□□ -0.18
TRAF3IP1-201ENST00000373327 C12orf54Q6X4T0 127 aa13.91□□□□□ -0.18
TRAF3IP1-201ENST00000373327 DYNAPQ8N1N2 210 aa13.91□□□□□ -0.18
TRAF3IP1-201ENST00000373327 IGLC2P0DOY2 106 aa13.9□□□□□ -0.18
TRAF3IP1-201ENST00000373327 IGLC3P0DOY3 106 aa13.9□□□□□ -0.18
TRAF3IP1-201ENST00000373327 H3BRN7 92 aa13.9□□□□□ -0.18
TRAF3IP1-201ENST00000373327 MSRB1Q9NZV6 116 aa13.9□□□□□ -0.18
TRAF3IP1-201ENST00000373327 MRPL27Q9P0M9 148 aaKnown RBP13.9□□□□□ -0.18
TRAF3IP1-201ENST00000373327 RNF114Q9Y508 228 aa13.9□□□□□ -0.18
TRAF3IP1-201ENST00000373327 TRAV26-2A0A0B4J265 109 aa13.9□□□□□ -0.18
TRAF3IP1-201ENST00000373327 ZNF124Q15973 351 aa13.9□□□□□ -0.18
TRAF3IP1-201ENST00000373327 FAM231DQ6ZW35 169 aa13.9□□□□□ -0.18
TRAF3IP1-201ENST00000373327 Q71RC1 249 aaPredicted RBP13.9□□□□□ -0.19
TRAF3IP1-201ENST00000373327 FCN3O75636 299 aa13.89□□□□□ -0.19
TRAF3IP1-201ENST00000373327 PRSS57Q6UWY2 283 aa13.89□□□□□ -0.19
TRAF3IP1-201ENST00000373327 ARL6IP6Q8N6S5 226 aa13.89□□□□□ -0.19
TRAF3IP1-201ENST00000373327 SIGLEC15Q6ZMC9 328 aa13.89□□□□□ -0.19
TRAF3IP1-201ENST00000373327 IFI27L1Q96BM0 104 aa13.89□□□□□ -0.19
TRAF3IP1-201ENST00000373327 JKAMPQ9P055 326 aa13.89□□□□□ -0.19
TRAF3IP1-201ENST00000373327 DCHS1Q96JQ0 3298 aa13.89□□□□□ -0.19
TRAF3IP1-201ENST00000373327 LINC01548A6NM66 108 aa13.88□□□□□ -0.19
TRAF3IP1-201ENST00000373327 SMAD7O15105 426 aaKnown RBP13.88□□□□□ -0.19
TRAF3IP1-201ENST00000373327 LTAP01374 205 aa13.88□□□□□ -0.19
TRAF3IP1-201ENST00000373327 C20orf144Q9BQM9 153 aa13.88□□□□□ -0.19
TRAF3IP1-201ENST00000373327 HBDP02042 147 aa13.88□□□□□ -0.19
TRAF3IP1-201ENST00000373327 DNLZQ5SXM8 178 aa13.88□□□□□ -0.19
TRAF3IP1-201ENST00000373327 FAM106AQ4KMX7 169 aa13.88□□□□□ -0.19
TRAF3IP1-201ENST00000373327 MINOS1Q5TGZ0 78 aa13.88□□□□□ -0.19
TRAF3IP1-201ENST00000373327 PRR25Q96S07 402 aa13.88□□□□□ -0.19
TRAF3IP1-201ENST00000373327 MINOS1-NBL1R4GNA1 71 aa13.88□□□□□ -0.19
TRAF3IP1-201ENST00000373327 RAI1Q7Z5J4 1906 aaPredicted RBP13.88□□□□□ -0.19
TRAF3IP1-201ENST00000373327 GAGE10A6NGK3 116 aa13.87□□□□□ -0.19
TRAF3IP1-201ENST00000373327 HAX1O00165 279 aa13.87□□□□□ -0.19
TRAF3IP1-201ENST00000373327 ZNF688P0C7X2 276 aa13.87□□□□□ -0.19
TRAF3IP1-201ENST00000373327 GATA1P15976 413 aaPredicted RBP13.87□□□□□ -0.19
TRAF3IP1-201ENST00000373327 SRSF9Q13242 221 aaKnown RBP eCLIP13.87□□□□□ -0.19
TRAF3IP1-201ENST00000373327 OVOL3O00110 214 aa13.87□□□□□ -0.19
TRAF3IP1-201ENST00000373327 Q6AWC8 147 aa13.87□□□□□ -0.19
TRAF3IP1-201ENST00000373327 CHCHD1Q96BP2 118 aaKnown RBP13.87□□□□□ -0.19
TRAF3IP1-201ENST00000373327 DLEU1O43261 78 aa13.87□□□□□ -0.19
TRAF3IP1-201ENST00000373327 FAM159AQ6UWV7 190 aa13.87□□□□□ -0.19
TRAF3IP1-201ENST00000373327 TEX43Q6ZNM6 134 aa13.87□□□□□ -0.19
TRAF3IP1-201ENST00000373327 TNRC6BQ9UPQ9 1833 aaKnown RBP13.87□□□□□ -0.19
TRAF3IP1-201ENST00000373327 F6UB75 175 aa13.87□□□□□ -0.19
TRAF3IP1-201ENST00000373327 RAB9AP51151 201 aa13.87□□□□□ -0.19
TRAF3IP1-201ENST00000373327 RASL11AQ6T310 242 aa13.87□□□□□ -0.19
TRAF3IP1-201ENST00000373327 LURAP1LQ8IV03 231 aa13.87□□□□□ -0.19
TRAF3IP1-201ENST00000373327 ZNF256Q9Y2P7 627 aaPredicted RBP13.86□□□□□ -0.19
TRAF3IP1-201ENST00000373327 IGHV7-81A0A0B4J1V7 117 aa13.86□□□□□ -0.19
TRAF3IP1-201ENST00000373327 HOXB4P17483 251 aaPredicted RBP13.86□□□□□ -0.19
TRAF3IP1-201ENST00000373327 TMEM95Q3KNT9 176 aa13.86□□□□□ -0.19
TRAF3IP1-201ENST00000373327 EGR2P11161 476 aaPredicted RBP13.86□□□□□ -0.19
TRAF3IP1-201ENST00000373327 GTSCR1Q86UQ5 136 aa13.86□□□□□ -0.19
TRAF3IP1-201ENST00000373327 MOB4Q9Y3A3 225 aa13.86□□□□□ -0.19
TRAF3IP1-201ENST00000373327 PRAC2D3DTV9 90 aa13.85□□□□□ -0.19
TRAF3IP1-201ENST00000373327 ZNF56Q15929 161 aa13.85□□□□□ -0.19
TRAF3IP1-201ENST00000373327 LDLRAD2Q5SZI1 272 aa13.85□□□□□ -0.19
TRAF3IP1-201ENST00000373327 C14orf178Q8N769 122 aaPredicted RBP13.85□□□□□ -0.19
TRAF3IP1-201ENST00000373327 LINC00574Q9H8X3 128 aa13.85□□□□□ -0.19
TRAF3IP1-201ENST00000373327 IGHV2-70DA0A0C4DH43 119 aa13.85□□□□□ -0.19
TRAF3IP1-201ENST00000373327 A6NDN8 102 aa13.85□□□□□ -0.19
TRAF3IP1-201ENST00000373327 LAMA5O15230 3695 aa13.85□□□□□ -0.19
TRAF3IP1-201ENST00000373327 COX6B1P14854 86 aa13.85□□□□□ -0.19
TRAF3IP1-201ENST00000373327 UBE2E1P51965 193 aa13.85□□□□□ -0.19
TRAF3IP1-201ENST00000373327 CBY1Q9Y3M2 126 aa13.85□□□□□ -0.19
TRAF3IP1-201ENST00000373327 EMP1P54849 157 aa13.84□□□□□ -0.19
TRAF3IP1-201ENST00000373327 NPFFR1Q9GZQ6 430 aa13.84□□□□□ -0.19
TRAF3IP1-201ENST00000373327 ZNF492Q9P255 531 aa13.84□□□□□ -0.19
TRAF3IP1-201ENST00000373327 A0A1W2PRX2 142 aa13.84□□□□□ -0.19
TRAF3IP1-201ENST00000373327 CD7P09564 240 aa13.84□□□□□ -0.19
TRAF3IP1-201ENST00000373327 OR4X2Q8NGF9 303 aa13.84□□□□□ -0.19
TRAF3IP1-201ENST00000373327 H3BUT2 72 aa13.84□□□□□ -0.19
TRAF3IP1-201ENST00000373327 NPYP01303 97 aa13.84□□□□□ -0.19
TRAF3IP1-201ENST00000373327 ID1P41134 155 aa13.84□□□□□ -0.19
TRAF3IP1-201ENST00000373327 MRPL51Q4U2R6 128 aaKnown RBP13.84□□□□□ -0.19
TRAF3IP1-201ENST00000373327 SLC50A1Q9BRV3 221 aa13.84□□□□□ -0.19
TRAF3IP1-201ENST00000373327 H7C2G1 150 aa13.84□□□□□ -0.19
TRAF3IP1-201ENST00000373327 CTSGP08311 255 aa13.84□□□□□ -0.19
TRAF3IP1-201ENST00000373327 ASIPP42127 132 aa13.84□□□□□ -0.19
TRAF3IP1-201ENST00000373327 SP5Q6BEB4 398 aaPredicted RBP13.84□□□□□ -0.19
TRAF3IP1-201ENST00000373327 PET117Q6UWS5 81 aa13.84□□□□□ -0.19
TRAF3IP1-201ENST00000373327 FANCD2OSQ96PS1 177 aa13.83□□□□□ -0.2
TRAF3IP1-201ENST00000373327 PRRC2AP48634 2157 aaKnown RBP13.83□□□□□ -0.2
TRAF3IP1-201ENST00000373327 C8orf31Q8N9H6 132 aa13.83□□□□□ -0.2
TRAF3IP1-201ENST00000373327 HIST1H4GQ99525 98 aa13.83□□□□□ -0.2
TRAF3IP1-201ENST00000373327 AMMECR1LQ6DCA0 310 aa13.82□□□□□ -0.2
TRAF3IP1-201ENST00000373327 KIR2DL5BA0A0G2JN68 375 aa13.82□□□□□ -0.2
TRAF3IP1-201ENST00000373327 KIR2DL5BA0A0G2JPC4 375 aa13.82□□□□□ -0.2
TRAF3IP1-201ENST00000373327 PSMG4Q5JS54 123 aa13.82□□□□□ -0.2
TRAF3IP1-201ENST00000373327 KIR2DL5AQ8N109 375 aa13.82□□□□□ -0.2
TRAF3IP1-201ENST00000373327 OR11H6Q8NGC7 330 aa13.82□□□□□ -0.2
TRAF3IP1-201ENST00000373327 TMEM158Q8WZ71 300 aa13.82□□□□□ -0.2
TRAF3IP1-201ENST00000373327 SCGB3A1Q96QR1 104 aa13.82□□□□□ -0.2
TRAF3IP1-201ENST00000373327 SIGLEC8Q9NYZ4 499 aa13.82□□□□□ -0.2
TRAF3IP1-201ENST00000373327 LYPD1Q8N2G4 141 aa13.82□□□□□ -0.2
TRAF3IP1-201ENST00000373327 DYNLRB2Q8TF09 96 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms