RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 FUSP35637 526 aaKnown RBP eCLIP10.75□□□□□ -0.69
RAPGEF1-201ENST00000372189 FHL1Q13642 323 aa10.75□□□□□ -0.69
RAPGEF1-201ENST00000372189 PLEKHB2Q96CS7 222 aa10.75□□□□□ -0.69
RAPGEF1-201ENST00000372189 SIGLEC9Q9Y336 463 aa10.75□□□□□ -0.69
RAPGEF1-201ENST00000372189 FAM236DA0A1B0GTK5 79 aa10.75□□□□□ -0.69
RAPGEF1-201ENST00000372189 FAM236CP0DP71 79 aa10.75□□□□□ -0.69
RAPGEF1-201ENST00000372189 KLF5Q13887 457 aaPredicted RBP10.75□□□□□ -0.69
RAPGEF1-201ENST00000372189 TRAV3A0A0B4J244 114 aa10.74□□□□□ -0.69
RAPGEF1-201ENST00000372189 C15orf62A8K5M9 175 aa10.74□□□□□ -0.69
RAPGEF1-201ENST00000372189 C9JQL5 133 aa10.74□□□□□ -0.69
RAPGEF1-201ENST00000372189 CR1LQ2VPA4 569 aa10.74□□□□□ -0.69
RAPGEF1-201ENST00000372189 RNF144BQ7Z419 303 aa10.74□□□□□ -0.69
RAPGEF1-201ENST00000372189 K7EM74 188 aa10.74□□□□□ -0.69
RAPGEF1-201ENST00000372189 PRB1P04280 392 aa10.74□□□□□ -0.69
RAPGEF1-201ENST00000372189 SH2D1AO60880 128 aa10.74□□□□□ -0.69
RAPGEF1-201ENST00000372189 C8orf31Q8N9H6 132 aa10.74□□□□□ -0.69
RAPGEF1-201ENST00000372189 GFRA4Q9GZZ7 299 aa10.74□□□□□ -0.69
RAPGEF1-201ENST00000372189 GVINP1Q7Z2Y8 2422 aa10.74□□□□□ -0.69
RAPGEF1-201ENST00000372189 K7ERS5 55 aa10.74□□□□□ -0.69
RAPGEF1-201ENST00000372189 DOCK8Q8NF50 2099 aa10.73□□□□□ -0.69
RAPGEF1-201ENST00000372189 LRRC75A-AS1Q8N1F1 130 aa10.73□□□□□ -0.69
RAPGEF1-201ENST00000372189 ACACAQ13085 2346 aa10.73□□□□□ -0.69
RAPGEF1-201ENST00000372189 PSMB8P28062 276 aa10.73□□□□□ -0.69
RAPGEF1-201ENST00000372189 CACNA1BQ00975 2339 aa10.73□□□□□ -0.69
RAPGEF1-201ENST00000372189 C10orf91Q5T1B1 145 aa10.73□□□□□ -0.69
RAPGEF1-201ENST00000372189 LYPD1Q8N2G4 141 aa10.73□□□□□ -0.69
RAPGEF1-201ENST00000372189 IGFL2Q6UWQ7 119 aa10.73□□□□□ -0.69
RAPGEF1-201ENST00000372189 IGLV1-44P01699 117 aa10.72□□□□□ -0.69
RAPGEF1-201ENST00000372189 ICE1Q9Y2F5 2266 aa10.72□□□□□ -0.69
RAPGEF1-201ENST00000372189 ALPK2Q86TB3 2170 aa10.72□□□□□ -0.69
RAPGEF1-201ENST00000372189 IGHV3-64A0A075B6Q5 118 aa10.72□□□□□ -0.69
RAPGEF1-201ENST00000372189 TRGV4A0A0C4DH28 118 aa10.72□□□□□ -0.69
RAPGEF1-201ENST00000372189 A0A0G2JRQ6 117 aa10.72□□□□□ -0.69
RAPGEF1-201ENST00000372189 CCL25O15444 150 aa10.72□□□□□ -0.69
RAPGEF1-201ENST00000372189 JPT2Q9H910 190 aa10.72□□□□□ -0.69
RAPGEF1-201ENST00000372189 NOTCH4Q99466 2003 aa10.72□□□□□ -0.69
RAPGEF1-201ENST00000372189 RPL15P61313 204 aaKnown RBP10.72□□□□□ -0.69
RAPGEF1-201ENST00000372189 LINC00473A8K010 186 aa10.72□□□□□ -0.69
RAPGEF1-201ENST00000372189 PRR31Q5SQ13 230 aa10.72□□□□□ -0.69
RAPGEF1-201ENST00000372189 TRAV12-1A0A0B4J245 112 aa10.72□□□□□ -0.69
RAPGEF1-201ENST00000372189 PFN1P07737 140 aaKnown RBP10.72□□□□□ -0.69
RAPGEF1-201ENST00000372189 Q6ZR03 302 aa10.71□□□□□ -0.69
RAPGEF1-201ENST00000372189 SIRPDQ9H106 197 aa10.71□□□□□ -0.69
RAPGEF1-201ENST00000372189 WISP1O95388 367 aa10.71□□□□□ -0.69
RAPGEF1-201ENST00000372189 HAPLN4Q86UW8 402 aa10.71□□□□□ -0.69
RAPGEF1-201ENST00000372189 CFHR2P36980 270 aa10.71□□□□□ -0.69
RAPGEF1-201ENST00000372189 ZNF581Q9P0T4 197 aa10.71□□□□□ -0.69
RAPGEF1-201ENST00000372189 FREM3P0C091 2139 aa10.71□□□□□ -0.7
RAPGEF1-201ENST00000372189 C5orf24Q7Z6I8 188 aa10.71□□□□□ -0.7
RAPGEF1-201ENST00000372189 KIF26BQ2KJY2 2108 aa10.71□□□□□ -0.7
RAPGEF1-201ENST00000372189 RIF1Q5UIP0 2472 aaKnown RBP10.71□□□□□ -0.7
RAPGEF1-201ENST00000372189 DPH3P1Q9H4G8 78 aa10.71□□□□□ -0.7
RAPGEF1-201ENST00000372189 HLA-DRB4P13762 266 aa10.7□□□□□ -0.7
RAPGEF1-201ENST00000372189 FXYD7P58549 80 aa10.7□□□□□ -0.7
RAPGEF1-201ENST00000372189 PMAIP1Q13794 54 aa10.7□□□□□ -0.7
RAPGEF1-201ENST00000372189 TMEM158Q8WZ71 300 aa10.7□□□□□ -0.7
RAPGEF1-201ENST00000372189 HLA-DRB4X5D2U9 266 aa10.7□□□□□ -0.7
RAPGEF1-201ENST00000372189 MYLKQ15746 1914 aa10.7□□□□□ -0.7
RAPGEF1-201ENST00000372189 HELZP42694 1942 aaKnown RBP10.7□□□□□ -0.7
RAPGEF1-201ENST00000372189 ZNF503-AS2A6NEH8 195 aa10.7□□□□□ -0.7
RAPGEF1-201ENST00000372189 RPL35AP18077 110 aaKnown RBP10.7□□□□□ -0.7
RAPGEF1-201ENST00000372189 MP68P56378 58 aa10.7□□□□□ -0.7
RAPGEF1-201ENST00000372189 ODF1Q14990 250 aa10.7□□□□□ -0.7
RAPGEF1-201ENST00000372189 Q6ZRM9 215 aa10.7□□□□□ -0.7
RAPGEF1-201ENST00000372189 UQCRQO14949 82 aa10.69□□□□□ -0.7
RAPGEF1-201ENST00000372189 UBE2DNLQ8IWF7 75 aa10.69□□□□□ -0.7
RAPGEF1-201ENST00000372189 NDPQ00604 133 aa10.69□□□□□ -0.7
RAPGEF1-201ENST00000372189 Q86TA4 180 aa10.69□□□□□ -0.7
RAPGEF1-201ENST00000372189 TEX48A0A1B0GUV7 120 aa10.69□□□□□ -0.7
RAPGEF1-201ENST00000372189 ADARB2-AS1A8MUL3 147 aa10.69□□□□□ -0.7
RAPGEF1-201ENST00000372189 VCYO14598 125 aa10.69□□□□□ -0.7
RAPGEF1-201ENST00000372189 PRO3102Q9H379 93 aa10.69□□□□□ -0.7
RAPGEF1-201ENST00000372189 TINCRA0A1B0GVN0 87 aa10.69□□□□□ -0.7
RAPGEF1-201ENST00000372189 IGHV2-5P01817 119 aa10.69□□□□□ -0.7
RAPGEF1-201ENST00000372189 ZC2HC1BQ5TFG8 222 aa10.69□□□□□ -0.7
RAPGEF1-201ENST00000372189 LEPROTO15243 131 aa10.68□□□□□ -0.7
RAPGEF1-201ENST00000372189 ELANEP08246 267 aa10.68□□□□□ -0.7
RAPGEF1-201ENST00000372189 GPR179Q6PRD1 2367 aa10.68□□□□□ -0.7
RAPGEF1-201ENST00000372189 TEX36Q5VZQ5 186 aa10.68□□□□□ -0.7
RAPGEF1-201ENST00000372189 VGLL1Q99990 258 aa10.68□□□□□ -0.7
RAPGEF1-201ENST00000372189 K7EN84 100 aa10.68□□□□□ -0.7
RAPGEF1-201ENST00000372189 PLA2G5P39877 138 aa10.68□□□□□ -0.7
RAPGEF1-201ENST00000372189 VOPP1Q96AW1 172 aa10.68□□□□□ -0.7
RAPGEF1-201ENST00000372189 CARD19Q96LW7 228 aa10.68□□□□□ -0.7
RAPGEF1-201ENST00000372189 ZNF492Q9P255 531 aa10.68□□□□□ -0.7
RAPGEF1-201ENST00000372189 NTN5Q8WTR8 489 aaPredicted RBP10.68□□□□□ -0.7
RAPGEF1-201ENST00000372189 CEP250Q9BV73 2442 aa10.68□□□□□ -0.7
RAPGEF1-201ENST00000372189 E9PQ18 207 aa10.67□□□□□ -0.7
RAPGEF1-201ENST00000372189 RS1O15537 224 aa10.67□□□□□ -0.7
RAPGEF1-201ENST00000372189 LMO1P25800 156 aa10.67□□□□□ -0.7
RAPGEF1-201ENST00000372189 LINC00158P58513 81 aa10.67□□□□□ -0.7
RAPGEF1-201ENST00000372189 C9orf139Q6ZV77 190 aa10.67□□□□□ -0.7
RAPGEF1-201ENST00000372189 IGLV3-9A0A075B6K5 115 aa10.67□□□□□ -0.7
RAPGEF1-201ENST00000372189 C18orf32Q8TCD1 76 aa10.67□□□□□ -0.7
RAPGEF1-201ENST00000372189 HS3ST6Q96QI5 342 aa10.67□□□□□ -0.7
RAPGEF1-201ENST00000372189 LIME1Q9H400 295 aa10.67□□□□□ -0.7
RAPGEF1-201ENST00000372189 KLF2Q9Y5W3 355 aaPredicted RBP10.67□□□□□ -0.7
RAPGEF1-201ENST00000372189 MYO7BQ6PIF6 2116 aa10.67□□□□□ -0.7
RAPGEF1-201ENST00000372189 GRNP28799 593 aaKnown RBP10.67□□□□□ -0.7
RAPGEF1-201ENST00000372189 LINC00477Q96M19 166 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms