RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 NDUFA3O95167 84 aa12.64□□□□□ -0.39
CHD1L-203ENST00000369259 GAGE5Q13069 117 aa12.64□□□□□ -0.39
CHD1L-203ENST00000369259 GAGE6Q13070 117 aa12.64□□□□□ -0.39
CHD1L-203ENST00000369259 ZNF491Q8N8L2 437 aa12.64□□□□□ -0.39
CHD1L-203ENST00000369259 SIGLEC9Q9Y336 463 aa12.64□□□□□ -0.39
CHD1L-203ENST00000369259 IGKV2-40A0A087WW87 121 aaPredicted RBP12.63□□□□□ -0.39
CHD1L-203ENST00000369259 IGKV2D-40P01614 121 aaPredicted RBP12.63□□□□□ -0.39
CHD1L-203ENST00000369259 ZNF80P51504 273 aaPredicted RBP12.63□□□□□ -0.39
CHD1L-203ENST00000369259 RNF125Q96EQ8 232 aa12.63□□□□□ -0.39
CHD1L-203ENST00000369259 CARD19Q96LW7 228 aa12.63□□□□□ -0.39
CHD1L-203ENST00000369259 CADP27708 2225 aa12.63□□□□□ -0.39
CHD1L-203ENST00000369259 PSMB2P49721 201 aa12.63□□□□□ -0.39
CHD1L-203ENST00000369259 SIT1Q9Y3P8 196 aa12.63□□□□□ -0.39
CHD1L-203ENST00000369259 CD40P25942 277 aa12.62□□□□□ -0.39
CHD1L-203ENST00000369259 FCN3O75636 299 aa12.62□□□□□ -0.39
CHD1L-203ENST00000369259 SRSF2Q01130 221 aaKnown RBP12.62□□□□□ -0.39
CHD1L-203ENST00000369259 LAGE3Q14657 143 aa12.62□□□□□ -0.39
CHD1L-203ENST00000369259 TEN1Q86WV5 123 aa12.62□□□□□ -0.39
CHD1L-203ENST00000369259 PTH2Q96A98 100 aa12.62□□□□□ -0.39
CHD1L-203ENST00000369259 RALYQ9UKM9 306 aaKnown RBP12.62□□□□□ -0.39
CHD1L-203ENST00000369259 PRSS29PA6NIE9 313 aa12.61□□□□□ -0.39
CHD1L-203ENST00000369259 ORM1P02763 201 aa12.61□□□□□ -0.39
CHD1L-203ENST00000369259 DTX2Q86UW9 622 aa12.61□□□□□ -0.39
CHD1L-203ENST00000369259 MAFAQ8NHW3 353 aaPredicted RBP12.61□□□□□ -0.39
CHD1L-203ENST00000369259 LINC01549A6NIU2 74 aa12.61□□□□□ -0.39
CHD1L-203ENST00000369259 A6NJY4 79 aa12.61□□□□□ -0.39
CHD1L-203ENST00000369259 LAMTOR5O43504 91 aa12.61□□□□□ -0.39
CHD1L-203ENST00000369259 PPP1R27Q86WC6 154 aa12.61□□□□□ -0.39
CHD1L-203ENST00000369259 LOC107984156A0A0G2JMH3 177 aa12.6□□□□□ -0.39
CHD1L-203ENST00000369259 ZFAND6Q6FIF0 208 aa12.6□□□□□ -0.39
CHD1L-203ENST00000369259 ARL17AQ8IVW1 177 aa12.6□□□□□ -0.39
CHD1L-203ENST00000369259 Q8TAT8 98 aa12.6□□□□□ -0.39
CHD1L-203ENST00000369259 H7C1H1 209 aa12.59□□□□□ -0.39
CHD1L-203ENST00000369259 K7EIM0 57 aa12.59□□□□□ -0.39
CHD1L-203ENST00000369259 TNRC18O15417 2968 aaPredicted RBP12.59□□□□□ -0.39
CHD1L-203ENST00000369259 COL27A1Q8IZC6 1860 aaPredicted RBP12.59□□□□□ -0.39
CHD1L-203ENST00000369259 PSMG3-AS1Q96PY0 264 aa12.59□□□□□ -0.39
CHD1L-203ENST00000369259 A0A1W2PNU3 283 aaPredicted RBP12.59□□□□□ -0.39
CHD1L-203ENST00000369259 LGALS1P09382 135 aaKnown RBP12.59□□□□□ -0.39
CHD1L-203ENST00000369259 ZFP2Q6ZN57 461 aa12.59□□□□□ -0.39
CHD1L-203ENST00000369259 F8VRH5 84 aa12.58□□□□□ -0.4
CHD1L-203ENST00000369259 UBE2D3P61077 147 aa12.58□□□□□ -0.4
CHD1L-203ENST00000369259 UBE2D2P62837 147 aa12.58□□□□□ -0.4
CHD1L-203ENST00000369259 TEX29Q8N6K0 151 aa12.58□□□□□ -0.4
CHD1L-203ENST00000369259 TRAV12-1A0A0B4J245 112 aa12.58□□□□□ -0.4
CHD1L-203ENST00000369259 ZNF688P0C7X2 276 aa12.58□□□□□ -0.4
CHD1L-203ENST00000369259 ATP1A1-AS1Q5TC04 95 aa12.58□□□□□ -0.4
CHD1L-203ENST00000369259 LYRM7Q5U5X0 104 aa12.58□□□□□ -0.4
CHD1L-203ENST00000369259 UFC1Q9Y3C8 167 aa12.58□□□□□ -0.4
CHD1L-203ENST00000369259 CACNA1GO43497 2377 aa12.58□□□□□ -0.4
CHD1L-203ENST00000369259 ICE1Q9Y2F5 2266 aa12.58□□□□□ -0.4
CHD1L-203ENST00000369259 UBE2D1P51668 147 aa12.57□□□□□ -0.4
CHD1L-203ENST00000369259 CCL8P80075 99 aa12.57□□□□□ -0.4
CHD1L-203ENST00000369259 SFTA2Q6UW10 78 aa12.57□□□□□ -0.4
CHD1L-203ENST00000369259 FABP5P3A8MUU1 101 aa12.57□□□□□ -0.4
CHD1L-203ENST00000369259 B5MCH6 92 aa12.57□□□□□ -0.4
CHD1L-203ENST00000369259 TNFRSF13BO14836 293 aaPredicted RBP12.57□□□□□ -0.4
CHD1L-203ENST00000369259 EFNA4P52798 201 aa12.57□□□□□ -0.4
CHD1L-203ENST00000369259 TMEM78Q5T7P6 136 aa12.57□□□□□ -0.4
CHD1L-203ENST00000369259 FBXL15Q9H469 300 aa12.57□□□□□ -0.4
CHD1L-203ENST00000369259 LINC01548A6NM66 108 aa12.56□□□□□ -0.4
CHD1L-203ENST00000369259 TMEM262E9PQX1 116 aa12.56□□□□□ -0.4
CHD1L-203ENST00000369259 DLX6P56179 175 aa12.56□□□□□ -0.4
CHD1L-203ENST00000369259 NDUFB3O43676 98 aa12.56□□□□□ -0.4
CHD1L-203ENST00000369259 SBSPONQ8IVN8 264 aa12.56□□□□□ -0.4
CHD1L-203ENST00000369259 C3orf36Q3SXR2 165 aa12.55□□□□□ -0.4
CHD1L-203ENST00000369259 NRACQ8N912 160 aa12.55□□□□□ -0.4
CHD1L-203ENST00000369259 RAXQ9Y2V3 346 aa12.55□□□□□ -0.4
CHD1L-203ENST00000369259 A8MWV9 139 aa12.55□□□□□ -0.4
CHD1L-203ENST00000369259 IGHV1-8P0DP01 117 aa12.55□□□□□ -0.4
CHD1L-203ENST00000369259 CITED1Q99966 193 aa12.55□□□□□ -0.4
CHD1L-203ENST00000369259 FAM90A27PA6NNH2 459 aa12.54□□□□□ -0.4
CHD1L-203ENST00000369259 LYPD2Q6UXB3 125 aa12.54□□□□□ -0.4
CHD1L-203ENST00000369259 NHLRC4P0CG21 123 aaPredicted RBP12.54□□□□□ -0.4
CHD1L-203ENST00000369259 SRSF9Q13242 221 aaKnown RBP eCLIP12.54□□□□□ -0.4
CHD1L-203ENST00000369259 OR11H6Q8NGC7 330 aa12.54□□□□□ -0.4
CHD1L-203ENST00000369259 SRSF8Q9BRL6 282 aaKnown RBP12.54□□□□□ -0.4
CHD1L-203ENST00000369259 CTSZQ9UBR2 303 aa12.54□□□□□ -0.4
CHD1L-203ENST00000369259 TRBV20-1A0A075B6N2 111 aa12.53□□□□□ -0.4
CHD1L-203ENST00000369259 TCL1BO95988 128 aa12.53□□□□□ -0.4
CHD1L-203ENST00000369259 TRGV3P03979 118 aa12.53□□□□□ -0.4
CHD1L-203ENST00000369259 TMEM155Q4W5P6 130 aa12.53□□□□□ -0.4
CHD1L-203ENST00000369259 RAB1BQ9H0U4 201 aa12.53□□□□□ -0.4
CHD1L-203ENST00000369259 DSPP15924 2871 aaKnown RBP12.53□□□□□ -0.4
CHD1L-203ENST00000369259 IGHV1-3A0A0C4DH29 117 aa12.52□□□□□ -0.4
CHD1L-203ENST00000369259 ZNF815PA8K554 130 aa12.52□□□□□ -0.4
CHD1L-203ENST00000369259 RPL7P18124 248 aaKnown RBP12.52□□□□□ -0.4
CHD1L-203ENST00000369259 SRD5A1P18405 259 aa12.52□□□□□ -0.4
CHD1L-203ENST00000369259 LOXP28300 417 aaPredicted RBP12.52□□□□□ -0.4
CHD1L-203ENST00000369259 ZNF672Q499Z4 452 aaPredicted RBP12.52□□□□□ -0.4
CHD1L-203ENST00000369259 ZNF474Q6S9Z5 364 aaPredicted RBP12.52□□□□□ -0.4
CHD1L-203ENST00000369259 IL17RELQ6ZVW7 336 aa12.52□□□□□ -0.4
CHD1L-203ENST00000369259 KIR2DL4Q99706 377 aa12.52□□□□□ -0.4
CHD1L-203ENST00000369259 TRAV26-2A0A0B4J265 109 aa12.52□□□□□ -0.41
CHD1L-203ENST00000369259 CNIH1O95406 144 aa12.52□□□□□ -0.41
CHD1L-203ENST00000369259 CD7P09564 240 aa12.52□□□□□ -0.41
CHD1L-203ENST00000369259 SCGB1D4Q6XE38 83 aa12.52□□□□□ -0.41
CHD1L-203ENST00000369259 ANKRD29Q8N6D5 301 aa12.52□□□□□ -0.41
CHD1L-203ENST00000369259 PRADC1Q9BSG0 188 aa12.52□□□□□ -0.41
CHD1L-203ENST00000369259 PRRC2CQ9Y520 2896 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms