RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 A0A0G2JLM5 398 aa10.82□□□□□ -0.68
USF1-202ENST00000368020 CLPSL1A2RUU4 121 aa10.82□□□□□ -0.68
USF1-202ENST00000368020 H3BUX3 64 aa10.82□□□□□ -0.68
USF1-202ENST00000368020 PMCHP20382 165 aa10.82□□□□□ -0.68
USF1-202ENST00000368020 LBHQ53QV2 105 aaPredicted RBP10.82□□□□□ -0.68
USF1-202ENST00000368020 LCN12Q6JVE5 192 aa10.82□□□□□ -0.68
USF1-202ENST00000368020 TEX43Q6ZNM6 134 aa10.82□□□□□ -0.68
USF1-202ENST00000368020 REC114Q7Z4M0 266 aa10.82□□□□□ -0.68
USF1-202ENST00000368020 SSBP4Q9BWG4 385 aaPredicted RBP10.82□□□□□ -0.68
USF1-202ENST00000368020 PRO1933Q9H354 126 aa10.82□□□□□ -0.68
USF1-202ENST00000368020 U3KQE9 123 aa10.82□□□□□ -0.68
USF1-202ENST00000368020 IGKV2-40A0A087WW87 121 aaPredicted RBP10.81□□□□□ -0.68
USF1-202ENST00000368020 KIR2DL5BA0A0G2JN68 375 aa10.81□□□□□ -0.68
USF1-202ENST00000368020 KIR2DL5BA0A0G2JPC4 375 aa10.81□□□□□ -0.68
USF1-202ENST00000368020 NDUFA4O00483 81 aa10.81□□□□□ -0.68
USF1-202ENST00000368020 IGKV2D-40P01614 121 aaPredicted RBP10.81□□□□□ -0.68
USF1-202ENST00000368020 IGHV4-31P0DP07 118 aa10.81□□□□□ -0.68
USF1-202ENST00000368020 ARL3P36405 182 aa10.81□□□□□ -0.68
USF1-202ENST00000368020 KIR2DL5AQ8N109 375 aa10.81□□□□□ -0.68
USF1-202ENST00000368020 TEX15Q9BXT5 2789 aa10.81□□□□□ -0.68
USF1-202ENST00000368020 CYSRT1A8MQ03 144 aa10.81□□□□□ -0.68
USF1-202ENST00000368020 SH2D1AO60880 128 aa10.81□□□□□ -0.68
USF1-202ENST00000368020 CRIP1P50238 77 aa10.81□□□□□ -0.68
USF1-202ENST00000368020 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.81□□□□□ -0.68
USF1-202ENST00000368020 C8orf49Q96NF6 230 aa10.81□□□□□ -0.68
USF1-202ENST00000368020 NDUFAF3Q9BU61 184 aa10.81□□□□□ -0.68
USF1-202ENST00000368020 IGHV3-35A0A0C4DH35 117 aa10.8□□□□□ -0.68
USF1-202ENST00000368020 TGFAP01135 160 aa10.8□□□□□ -0.68
USF1-202ENST00000368020 PPIFP30405 207 aaKnown RBP10.8□□□□□ -0.68
USF1-202ENST00000368020 ZNF493Q6ZR52 646 aa10.8□□□□□ -0.68
USF1-202ENST00000368020 MAPK1IP1LQ8NDC0 245 aa10.8□□□□□ -0.68
USF1-202ENST00000368020 CSMD1Q96PZ7 3565 aa10.79□□□□□ -0.68
USF1-202ENST00000368020 IGHG4P01861 327 aa10.79□□□□□ -0.68
USF1-202ENST00000368020 KRTDAPP60985 99 aa10.79□□□□□ -0.68
USF1-202ENST00000368020 RNASEKQ6P5S7 137 aaKnown RBP10.79□□□□□ -0.68
USF1-202ENST00000368020 VAMP8Q9BV40 100 aa10.79□□□□□ -0.68
USF1-202ENST00000368020 PPP1R14DQ9NXH3 145 aa10.79□□□□□ -0.68
USF1-202ENST00000368020 FABP5P3A8MUU1 101 aa10.78□□□□□ -0.68
USF1-202ENST00000368020 M0R2Z0 102 aa10.78□□□□□ -0.68
USF1-202ENST00000368020 ARMS2P0C7Q2 107 aa10.78□□□□□ -0.68
USF1-202ENST00000368020 NTF3P20783 257 aa10.78□□□□□ -0.68
USF1-202ENST00000368020 C9orf139Q6ZV77 190 aa10.78□□□□□ -0.68
USF1-202ENST00000368020 ASCL2Q99929 193 aa10.78□□□□□ -0.68
USF1-202ENST00000368020 C20orf144Q9BQM9 153 aa10.78□□□□□ -0.68
USF1-202ENST00000368020 OR5AL1P0C617 328 aa10.78□□□□□ -0.68
USF1-202ENST00000368020 CTRLP40313 264 aa10.78□□□□□ -0.68
USF1-202ENST00000368020 PMCHL1Q16048 86 aa10.78□□□□□ -0.68
USF1-202ENST00000368020 LY6EQ16553 131 aa10.78□□□□□ -0.68
USF1-202ENST00000368020 MRPL52Q86TS9 123 aaKnown RBP10.78□□□□□ -0.68
USF1-202ENST00000368020 NIT1Q86X76 327 aa10.78□□□□□ -0.68
USF1-202ENST00000368020 C14orf144Q96I85 54 aa10.78□□□□□ -0.68
USF1-202ENST00000368020 LENEPQ9Y5L5 61 aa10.78□□□□□ -0.68
USF1-202ENST00000368020 VPS13CQ709C8 3753 aa10.77□□□□□ -0.69
USF1-202ENST00000368020 IGHV3OR16-8A0A075B7F1 116 aa10.77□□□□□ -0.69
USF1-202ENST00000368020 TMEM89A2RUT3 159 aa10.77□□□□□ -0.69
USF1-202ENST00000368020 TMEM78Q5T7P6 136 aa10.77□□□□□ -0.69
USF1-202ENST00000368020 C8orf86Q6ZUL3 223 aa10.77□□□□□ -0.69
USF1-202ENST00000368020 VGLL1Q99990 258 aa10.77□□□□□ -0.69
USF1-202ENST00000368020 FAM181BA6NEQ2 426 aa10.76□□□□□ -0.69
USF1-202ENST00000368020 IGLV1-40P01703 118 aa10.76□□□□□ -0.69
USF1-202ENST00000368020 HIST1H1AQ02539 215 aaPredicted RBP10.76□□□□□ -0.69
USF1-202ENST00000368020 SAMD13Q5VXD3 122 aa10.76□□□□□ -0.69
USF1-202ENST00000368020 FER1L6-AS1Q8NA97 138 aa10.76□□□□□ -0.69
USF1-202ENST00000368020 GLMPQ8WWB7 406 aa10.76□□□□□ -0.69
USF1-202ENST00000368020 OTOGQ6ZRI0 2925 aa10.76□□□□□ -0.69
USF1-202ENST00000368020 LINC00614P0C842 121 aa10.75□□□□□ -0.69
USF1-202ENST00000368020 BTF3P20290 206 aaKnown RBP10.75□□□□□ -0.69
USF1-202ENST00000368020 ZNF138P52744 262 aa10.75□□□□□ -0.69
USF1-202ENST00000368020 LINC01559Q495D7 138 aa10.75□□□□□ -0.69
USF1-202ENST00000368020 LYZL1Q6UWQ5 148 aa10.75□□□□□ -0.69
USF1-202ENST00000368020 C9orf47Q6ZRZ4 202 aa10.75□□□□□ -0.69
USF1-202ENST00000368020 FAM19A2Q8N3H0 131 aa10.75□□□□□ -0.69
USF1-202ENST00000368020 C3orf79P0CE67 100 aa10.75□□□□□ -0.69
USF1-202ENST00000368020 PF4V1P10720 104 aa10.75□□□□□ -0.69
USF1-202ENST00000368020 Q8TAT8 98 aa10.75□□□□□ -0.69
USF1-202ENST00000368020 TPPP3Q9BW30 176 aa10.75□□□□□ -0.69
USF1-202ENST00000368020 CNFNQ9BYD5 112 aa10.75□□□□□ -0.69
USF1-202ENST00000368020 SONP18583 2426 aaKnown RBP10.75□□□□□ -0.69
USF1-202ENST00000368020 C20orf202A1L168 122 aa10.74□□□□□ -0.69
USF1-202ENST00000368020 SMAD7O15105 426 aaKnown RBP10.74□□□□□ -0.69
USF1-202ENST00000368020 IGLC6P0CF74 106 aa10.74□□□□□ -0.69
USF1-202ENST00000368020 Q71RC1 249 aaPredicted RBP10.74□□□□□ -0.69
USF1-202ENST00000368020 TEX29Q8N6K0 151 aa10.74□□□□□ -0.69
USF1-202ENST00000368020 C16orf92Q96LL3 132 aa10.74□□□□□ -0.69
USF1-202ENST00000368020 NPFFR1Q9GZQ6 430 aa10.74□□□□□ -0.69
USF1-202ENST00000368020 LINC00527Q9UJ94 153 aa10.74□□□□□ -0.69
USF1-202ENST00000368020 MAST4O15021 2626 aa10.73□□□□□ -0.69
USF1-202ENST00000368020 CD5LO43866 347 aa10.73□□□□□ -0.69
USF1-202ENST00000368020 AVPP01185 164 aa10.73□□□□□ -0.69
USF1-202ENST00000368020 HLA-DMBP28068 263 aa10.73□□□□□ -0.69
USF1-202ENST00000368020 CFHR3Q02985 330 aa10.73□□□□□ -0.69
USF1-202ENST00000368020 KLHDC1Q8N7A1 406 aa10.73□□□□□ -0.69
USF1-202ENST00000368020 OR4X2Q8NGF9 303 aa10.73□□□□□ -0.69
USF1-202ENST00000368020 TRAV8-2A0A0B4J237 113 aa10.72□□□□□ -0.69
USF1-202ENST00000368020 IGHV3-66A0A0C4DH42 116 aa10.72□□□□□ -0.69
USF1-202ENST00000368020 ORM1P02763 201 aa10.72□□□□□ -0.69
USF1-202ENST00000368020 CD33P20138 364 aa10.72□□□□□ -0.69
USF1-202ENST00000368020 KRTAP1-1Q07627 177 aa10.72□□□□□ -0.69
USF1-202ENST00000368020 FAM104BQ5XKR9 115 aa10.72□□□□□ -0.69
USF1-202ENST00000368020 IGFL4Q6B9Z1 124 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms