RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 SYNJ2BPP57105 145 aa11.87□□□□□ -0.51
CHD4-201ENST00000357008 PRO1854Q9UHT4 67 aa11.87□□□□□ -0.51
CHD4-201ENST00000357008 MSRB2Q9Y3D2 182 aa11.87□□□□□ -0.51
CHD4-201ENST00000357008 THADAQ6YHU6 1953 aa11.87□□□□□ -0.51
CHD4-201ENST00000357008 FGF6P10767 208 aa11.87□□□□□ -0.51
CHD4-201ENST00000357008 CADP27708 2225 aa11.87□□□□□ -0.51
CHD4-201ENST00000357008 LY6HO94772 140 aa11.87□□□□□ -0.51
CHD4-201ENST00000357008 C15orf65H3BRN8 121 aa11.87□□□□□ -0.51
CHD4-201ENST00000357008 NPYP01303 97 aa11.87□□□□□ -0.51
CHD4-201ENST00000357008 KLHL30-AS1Q8NEE0 82 aa11.87□□□□□ -0.51
CHD4-201ENST00000357008 VWC2Q2TAL6 325 aa11.87□□□□□ -0.51
CHD4-201ENST00000357008 FXYD5Q96DB9 178 aa11.87□□□□□ -0.51
CHD4-201ENST00000357008 RSPO1Q2MKA7 263 aaPredicted RBP11.86□□□□□ -0.51
CHD4-201ENST00000357008 SMIM2Q9BVW6 85 aa11.86□□□□□ -0.51
CHD4-201ENST00000357008 WISP1O95388 367 aa11.86□□□□□ -0.51
CHD4-201ENST00000357008 C8orf86Q6ZUL3 223 aa11.86□□□□□ -0.51
CHD4-201ENST00000357008 THAP8Q8NA92 274 aa11.86□□□□□ -0.51
CHD4-201ENST00000357008 BPESC1Q9GZL8 116 aa11.86□□□□□ -0.51
CHD4-201ENST00000357008 MYO7BQ6PIF6 2116 aa11.86□□□□□ -0.51
CHD4-201ENST00000357008 DOCK10Q96BY6 2186 aa11.86□□□□□ -0.51
CHD4-201ENST00000357008 K7EM74 188 aa11.86□□□□□ -0.51
CHD4-201ENST00000357008 ZC2HC1AQ96GY0 325 aa11.86□□□□□ -0.51
CHD4-201ENST00000357008 SCN5AQ14524 2016 aa11.86□□□□□ -0.51
CHD4-201ENST00000357008 GAGE12HA6NDE8 117 aa11.86□□□□□ -0.51
CHD4-201ENST00000357008 UTF1Q5T230 341 aa11.86□□□□□ -0.51
CHD4-201ENST00000357008 PRR20EP86478 221 aa11.86□□□□□ -0.51
CHD4-201ENST00000357008 PRR20CP86479 221 aa11.86□□□□□ -0.51
CHD4-201ENST00000357008 PRR20DP86480 221 aa11.86□□□□□ -0.51
CHD4-201ENST00000357008 PRR20BP86481 221 aa11.86□□□□□ -0.51
CHD4-201ENST00000357008 PRR20AP86496 221 aa11.86□□□□□ -0.51
CHD4-201ENST00000357008 KNCNA6PVL3 124 aa11.85□□□□□ -0.51
CHD4-201ENST00000357008 RNF166Q96A37 237 aaPredicted RBP11.85□□□□□ -0.51
CHD4-201ENST00000357008 WIPF3A6NGB9 483 aa11.85□□□□□ -0.51
CHD4-201ENST00000357008 TRAV26-2A0A0B4J265 109 aa11.85□□□□□ -0.51
CHD4-201ENST00000357008 IGLV3-1P01715 115 aa11.85□□□□□ -0.51
CHD4-201ENST00000357008 PYGO2Q9BRQ0 406 aa11.85□□□□□ -0.51
CHD4-201ENST00000357008 VOPP1Q96AW1 172 aa11.85□□□□□ -0.51
CHD4-201ENST00000357008 PLXNA3P51805 1871 aa11.85□□□□□ -0.51
CHD4-201ENST00000357008 ZNF524Q96C55 264 aa11.85□□□□□ -0.51
CHD4-201ENST00000357008 PROK2Q9HC23 129 aa11.85□□□□□ -0.51
CHD4-201ENST00000357008 SPINK13Q1W4C9 94 aa11.84□□□□□ -0.51
CHD4-201ENST00000357008 NDUFA12Q9UI09 145 aa11.84□□□□□ -0.51
CHD4-201ENST00000357008 IGHV1OR15-1A0A075B7D0 117 aa11.84□□□□□ -0.51
CHD4-201ENST00000357008 MORN5Q5VZ52 161 aa11.84□□□□□ -0.51
CHD4-201ENST00000357008 ACACAQ13085 2346 aa11.84□□□□□ -0.51
CHD4-201ENST00000357008 WIPF2Q8TF74 440 aaPredicted RBP11.84□□□□□ -0.51
CHD4-201ENST00000357008 CDK2AP2O75956 126 aa11.84□□□□□ -0.51
CHD4-201ENST00000357008 IFITM1P13164 125 aa11.84□□□□□ -0.51
CHD4-201ENST00000357008 ANXA2RQ3ZCQ2 193 aa11.84□□□□□ -0.51
CHD4-201ENST00000357008 COA6Q5JTJ3 125 aaKnown RBP11.84□□□□□ -0.51
CHD4-201ENST00000357008 K7EN84 100 aa11.83□□□□□ -0.51
CHD4-201ENST00000357008 NDUFS7O75251 213 aa11.83□□□□□ -0.51
CHD4-201ENST00000357008 LOXP28300 417 aaPredicted RBP11.83□□□□□ -0.51
CHD4-201ENST00000357008 POU2AF1Q16633 256 aa11.83□□□□□ -0.51
CHD4-201ENST00000357008 H3BMG7 143 aa11.83□□□□□ -0.52
CHD4-201ENST00000357008 KLF5Q13887 457 aaPredicted RBP11.83□□□□□ -0.52
CHD4-201ENST00000357008 IGLC1P0CG04 106 aa11.83□□□□□ -0.52
CHD4-201ENST00000357008 ATP6V0BQ99437 205 aa11.83□□□□□ -0.52
CHD4-201ENST00000357008 C20orf78Q9BR46 151 aa11.83□□□□□ -0.52
CHD4-201ENST00000357008 PKDREJQ9NTG1 2253 aa11.83□□□□□ -0.52
CHD4-201ENST00000357008 ZNF134P52741 427 aa11.83□□□□□ -0.52
CHD4-201ENST00000357008 TEX36Q5VZQ5 186 aa11.83□□□□□ -0.52
CHD4-201ENST00000357008 SLX1AQ9BQ83 275 aa11.83□□□□□ -0.52
CHD4-201ENST00000357008 LTAP01374 205 aa11.83□□□□□ -0.52
CHD4-201ENST00000357008 LTBP1Q14766 1721 aa11.83□□□□□ -0.52
CHD4-201ENST00000357008 DOCK9Q9BZ29 2069 aa11.82□□□□□ -0.52
CHD4-201ENST00000357008 TRBV25-1A0A075B6N4 114 aa11.82□□□□□ -0.52
CHD4-201ENST00000357008 KIR2DL5BA0A0G2JN68 375 aa11.82□□□□□ -0.52
CHD4-201ENST00000357008 KIR2DL5BA0A0G2JPC4 375 aa11.82□□□□□ -0.52
CHD4-201ENST00000357008 DEFB130BP0DP73 79 aa11.82□□□□□ -0.52
CHD4-201ENST00000357008 DEFB130AP0DP74 79 aa11.82□□□□□ -0.52
CHD4-201ENST00000357008 KIR2DL5AQ8N109 375 aa11.82□□□□□ -0.52
CHD4-201ENST00000357008 IGLC7A0M8Q6 106 aa11.82□□□□□ -0.52
CHD4-201ENST00000357008 NDUFA4O00483 81 aa11.82□□□□□ -0.52
CHD4-201ENST00000357008 HLA-DMBP28068 263 aa11.82□□□□□ -0.52
CHD4-201ENST00000357008 UBL5Q9BZL1 73 aa11.82□□□□□ -0.52
CHD4-201ENST00000357008 GAGE12JA6NER3 117 aa11.82□□□□□ -0.52
CHD4-201ENST00000357008 G3V318 75 aa11.82□□□□□ -0.52
CHD4-201ENST00000357008 GAGE4Q13068 117 aa11.82□□□□□ -0.52
CHD4-201ENST00000357008 GAGE5Q13069 117 aa11.82□□□□□ -0.52
CHD4-201ENST00000357008 KLK9Q9UKQ9 250 aa11.82□□□□□ -0.52
CHD4-201ENST00000357008 KLF2Q9Y5W3 355 aaPredicted RBP11.82□□□□□ -0.52
CHD4-201ENST00000357008 CACNA1GO43497 2377 aa11.82□□□□□ -0.52
CHD4-201ENST00000357008 DUX4L9Q6RFH8 374 aaPredicted RBP11.82□□□□□ -0.52
CHD4-201ENST00000357008 ZNF747Q9BV97 191 aa11.82□□□□□ -0.52
CHD4-201ENST00000357008 BOD1L2Q8IYS8 172 aa11.81□□□□□ -0.52
CHD4-201ENST00000357008 ARFGEF3Q5TH69 2177 aa11.81□□□□□ -0.52
CHD4-201ENST00000357008 ZNF503-AS2A6NEH8 195 aa11.81□□□□□ -0.52
CHD4-201ENST00000357008 J3QQQ9 107 aa11.81□□□□□ -0.52
CHD4-201ENST00000357008 LINC01356Q8N9X3 169 aa11.81□□□□□ -0.52
CHD4-201ENST00000357008 NCOR1O75376 2440 aa11.81□□□□□ -0.52
CHD4-201ENST00000357008 SSC4DQ8WTU2 575 aa11.81□□□□□ -0.52
CHD4-201ENST00000357008 TPSG1Q9NRR2 321 aa11.81□□□□□ -0.52
CHD4-201ENST00000357008 K7ERJ3 54 aa11.81□□□□□ -0.52
CHD4-201ENST00000357008 DKK2Q9UBU2 259 aa11.81□□□□□ -0.52
CHD4-201ENST00000357008 TCF20Q9UGU0 1960 aaKnown RBP11.81□□□□□ -0.52
CHD4-201ENST00000357008 VWA8A3KMH1 1905 aa11.81□□□□□ -0.52
CHD4-201ENST00000357008 C12orf74Q32Q52 190 aa11.81□□□□□ -0.52
CHD4-201ENST00000357008 ZSWIM8A7E2V4 1837 aa11.8□□□□□ -0.52
CHD4-201ENST00000357008 YLPM1P49750 1951 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms