RNA–Protein interactions for RNA: ENST00000354193.4

SVIP-201, Transcript of small VCP interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SVIP, Length 4,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-201ENST00000354193 IQCJQ1A5X6 159 aa8.54□□□□□ -1.04
SVIP-201ENST00000354193 SPANXN1Q5VSR9 72 aa8.54□□□□□ -1.04
SVIP-201ENST00000354193 POLR3KQ9Y2Y1 108 aaPredicted RBP8.54□□□□□ -1.04
SVIP-201ENST00000354193 PLP1P60201 277 aa8.54□□□□□ -1.04
SVIP-201ENST00000354193 DNAJC9-AS1A6NH13 148 aa8.54□□□□□ -1.04
SVIP-201ENST00000354193 PHOX2AO14813 284 aa8.54□□□□□ -1.04
SVIP-201ENST00000354193 FAM19A2Q8N3H0 131 aa8.54□□□□□ -1.04
SVIP-201ENST00000354193 NBPF19A0A087WUL8 3843 aa8.54□□□□□ -1.04
SVIP-201ENST00000354193 BMI1P35226 326 aa8.53□□□□□ -1.04
SVIP-201ENST00000354193 ID1P41134 155 aa8.53□□□□□ -1.04
SVIP-201ENST00000354193 TMEM256Q8N2U0 113 aa8.53□□□□□ -1.04
SVIP-201ENST00000354193 SAPCD1Q5SSQ6 148 aa8.53□□□□□ -1.04
SVIP-201ENST00000354193 EBLN2Q6P2I7 272 aa8.53□□□□□ -1.04
SVIP-201ENST00000354193 Q6YL49 198 aa8.53□□□□□ -1.04
SVIP-201ENST00000354193 PACRGQ96M98 296 aaPredicted RBP8.53□□□□□ -1.04
SVIP-201ENST00000354193 TMEM242Q9NWH2 141 aa8.53□□□□□ -1.04
SVIP-201ENST00000354193 INAFM1C9JVW0 142 aa8.53□□□□□ -1.04
SVIP-201ENST00000354193 IGLC2P0DOY2 106 aa8.53□□□□□ -1.04
SVIP-201ENST00000354193 TCTEX1D4Q5JR98 221 aa8.53□□□□□ -1.04
SVIP-201ENST00000354193 SMIM15Q7Z3B0 74 aa8.53□□□□□ -1.04
SVIP-201ENST00000354193 LRRC75A-AS1Q8N1F1 130 aa8.53□□□□□ -1.04
SVIP-201ENST00000354193 SLC50A1Q9BRV3 221 aa8.53□□□□□ -1.04
SVIP-201ENST00000354193 NRN1Q9NPD7 142 aa8.53□□□□□ -1.04
SVIP-201ENST00000354193 F5H697 171 aa8.53□□□□□ -1.04
SVIP-201ENST00000354193 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.53□□□□□ -1.04
SVIP-201ENST00000354193 WDR73Q6P4I2 378 aa8.52□□□□□ -1.04
SVIP-201ENST00000354193 TMEM18Q96B42 140 aa8.52□□□□□ -1.04
SVIP-201ENST00000354193 TMEM14CQ9P0S9 112 aa8.52□□□□□ -1.04
SVIP-201ENST00000354193 TRBV9A0A0B4J1U6 114 aa8.52□□□□□ -1.05
SVIP-201ENST00000354193 NDUFA4O00483 81 aa8.52□□□□□ -1.05
SVIP-201ENST00000354193 SH2D1AO60880 128 aa8.52□□□□□ -1.05
SVIP-201ENST00000354193 IGF1P05019 195 aa8.52□□□□□ -1.05
SVIP-201ENST00000354193 SNRPD3P62318 126 aaKnown RBP8.52□□□□□ -1.05
SVIP-201ENST00000354193 FAM162BQ5T6X4 162 aa8.52□□□□□ -1.05
SVIP-201ENST00000354193 TRAV12-2A0A075B6T6 113 aa8.52□□□□□ -1.05
SVIP-201ENST00000354193 CD99P14209 185 aa8.52□□□□□ -1.05
SVIP-201ENST00000354193 TMEM183AQ8IXX5 376 aa8.52□□□□□ -1.05
SVIP-201ENST00000354193 WIPF2Q8TF74 440 aaPredicted RBP8.52□□□□□ -1.05
SVIP-201ENST00000354193 PF4P02776 101 aa8.52□□□□□ -1.05
SVIP-201ENST00000354193 ARMS2P0C7Q2 107 aa8.52□□□□□ -1.05
SVIP-201ENST00000354193 ZNF138P52744 262 aa8.52□□□□□ -1.05
SVIP-201ENST00000354193 TEX29Q8N6K0 151 aa8.52□□□□□ -1.05
SVIP-201ENST00000354193 PRSS3P2Q8NHM4 247 aa8.52□□□□□ -1.05
SVIP-201ENST00000354193 PRO1933Q9H354 126 aa8.52□□□□□ -1.05
SVIP-201ENST00000354193 ZFP30Q9Y2G7 519 aa8.52□□□□□ -1.05
SVIP-201ENST00000354193 HIVEP1P15822 2718 aa8.51□□□□□ -1.05
SVIP-201ENST00000354193 COL6A5A8TX70 2615 aa8.51□□□□□ -1.05
SVIP-201ENST00000354193 MGPP08493 103 aa8.51□□□□□ -1.05
SVIP-201ENST00000354193 FOXL1Q12952 345 aa8.51□□□□□ -1.05
SVIP-201ENST00000354193 TSKUQ8WUA8 353 aa8.51□□□□□ -1.05
SVIP-201ENST00000354193 AGPAT4-IT1Q9H0P7 198 aa8.51□□□□□ -1.05
SVIP-201ENST00000354193 A0A1B0GUT8 65 aa8.51□□□□□ -1.05
SVIP-201ENST00000354193 FABP5P3A8MUU1 101 aa8.51□□□□□ -1.05
SVIP-201ENST00000354193 TCTAP57738 103 aa8.51□□□□□ -1.05
SVIP-201ENST00000354193 S100A12P80511 92 aa8.51□□□□□ -1.05
SVIP-201ENST00000354193 RIGQ13278 110 aa8.51□□□□□ -1.05
SVIP-201ENST00000354193 ACTL10Q5JWF8 245 aa8.51□□□□□ -1.05
SVIP-201ENST00000354193 PRR25Q96S07 402 aa8.51□□□□□ -1.05
SVIP-201ENST00000354193 ZFAND3Q9H8U3 227 aa8.51□□□□□ -1.05
SVIP-201ENST00000354193 IZUMO1RA6ND01 250 aa8.51□□□□□ -1.05
SVIP-201ENST00000354193 HBBP68871 147 aa8.51□□□□□ -1.05
SVIP-201ENST00000354193 SMAD5-AS1Q9Y6J3 95 aa8.51□□□□□ -1.05
SVIP-201ENST00000354193 TRAV12-3A0A0B4J271 114 aa8.5□□□□□ -1.05
SVIP-201ENST00000354193 H3BVH4 76 aa8.5□□□□□ -1.05
SVIP-201ENST00000354193 IGLV2-8P01709 118 aa8.5□□□□□ -1.05
SVIP-201ENST00000354193 FOLR2P14207 255 aa8.5□□□□□ -1.05
SVIP-201ENST00000354193 PDE6HQ13956 83 aa8.5□□□□□ -1.05
SVIP-201ENST00000354193 FAM74A4Q5TZK3 123 aa8.5□□□□□ -1.05
SVIP-201ENST00000354193 LYZL1Q6UWQ5 148 aa8.5□□□□□ -1.05
SVIP-201ENST00000354193 OR1N2Q8NGR9 330 aa8.5□□□□□ -1.05
SVIP-201ENST00000354193 MGAM2Q2M2H8 2515 aa8.5□□□□□ -1.05
SVIP-201ENST00000354193 IGHV7-4-1A0A0J9YVY3 117 aa8.5□□□□□ -1.05
SVIP-201ENST00000354193 HLA-DQA1P01909 254 aa8.5□□□□□ -1.05
SVIP-201ENST00000354193 FOXE3Q13461 319 aa8.5□□□□□ -1.05
SVIP-201ENST00000354193 TMEM213A2RRL7 107 aa8.5□□□□□ -1.05
SVIP-201ENST00000354193 M0R2Z0 102 aa8.5□□□□□ -1.05
SVIP-201ENST00000354193 SERF1AO75920 110 aa8.5□□□□□ -1.05
SVIP-201ENST00000354193 DEFB131AP59861 70 aa8.5□□□□□ -1.05
SVIP-201ENST00000354193 SCGB2A2Q13296 93 aa8.5□□□□□ -1.05
SVIP-201ENST00000354193 TMEM190Q8WZ59 177 aa8.5□□□□□ -1.05
SVIP-201ENST00000354193 IGF2BP2-AS1Q96M15 143 aa8.5□□□□□ -1.05
SVIP-201ENST00000354193 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.5□□□□□ -1.05
SVIP-201ENST00000354193 SAP30O75446 220 aa8.5□□□□□ -1.05
SVIP-201ENST00000354193 NCR2O95944 276 aa8.5□□□□□ -1.05
SVIP-201ENST00000354193 PMCHL1Q16048 86 aa8.5□□□□□ -1.05
SVIP-201ENST00000354193 FER1L6-AS1Q8NA97 138 aa8.5□□□□□ -1.05
SVIP-201ENST00000354193 SMPXQ9UHP9 88 aa8.5□□□□□ -1.05
SVIP-201ENST00000354193 PRSS57Q6UWY2 283 aa8.49□□□□□ -1.05
SVIP-201ENST00000354193 Q6ZSV7 163 aa8.49□□□□□ -1.05
SVIP-201ENST00000354193 LYPD1Q8N2G4 141 aa8.49□□□□□ -1.05
SVIP-201ENST00000354193 F2Z2F3 143 aa8.49□□□□□ -1.05
SVIP-201ENST00000354193 MEOX2P50222 304 aa8.49□□□□□ -1.05
SVIP-201ENST00000354193 SPINK13Q1W4C9 94 aa8.49□□□□□ -1.05
SVIP-201ENST00000354193 STAB1Q9NY15 2570 aa8.49□□□□□ -1.05
SVIP-201ENST00000354193 SMKR1H3BMG3 65 aa8.49□□□□□ -1.05
SVIP-201ENST00000354193 IGHG4P01861 327 aa8.49□□□□□ -1.05
SVIP-201ENST00000354193 KIR3DS1Q14943 382 aa8.49□□□□□ -1.05
SVIP-201ENST00000354193 FAM209BQ5JX69 171 aa8.49□□□□□ -1.05
SVIP-201ENST00000354193 CITED2Q99967 270 aaPredicted RBP8.49□□□□□ -1.05
SVIP-201ENST00000354193 PHLDA3Q9Y5J5 127 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms