RNA–Protein interactions for RNA: ENST00000344951.8

CUL3-202, Transcript of cullin 3, humanhuman

TSL 2 BASIC

Gene CUL3, Length 6,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-202ENST00000344951 CRIPAKQ8N1N5 446 aa12.09□□□□□ -0.47
CUL3-202ENST00000344951 ABCA7Q8IZY2 2146 aa12.09□□□□□ -0.47
CUL3-202ENST00000344951 AKAP6Q13023 2319 aa12.09□□□□□ -0.47
CUL3-202ENST00000344951 INAFM2P0DMQ5 153 aa12.09□□□□□ -0.47
CUL3-202ENST00000344951 RMI2Q96E14 147 aa12.09□□□□□ -0.47
CUL3-202ENST00000344951 M0R1W7 72 aa12.09□□□□□ -0.47
CUL3-202ENST00000344951 ANK1P16157 1881 aa12.09□□□□□ -0.47
CUL3-202ENST00000344951 NPSP0C0P6 89 aa12.09□□□□□ -0.47
CUL3-202ENST00000344951 RBM3P98179 157 aaKnown RBP12.09□□□□□ -0.47
CUL3-202ENST00000344951 ARTNQ5T4W7 220 aa12.09□□□□□ -0.47
CUL3-202ENST00000344951 DEFB136Q30KP8 78 aa12.08□□□□□ -0.48
CUL3-202ENST00000344951 C14orf132Q9NPU4 83 aa12.08□□□□□ -0.48
CUL3-202ENST00000344951 ZFP36L1Q07352 338 aaKnown RBP12.08□□□□□ -0.48
CUL3-202ENST00000344951 FAM120AOSQ5T036 256 aa12.08□□□□□ -0.48
CUL3-202ENST00000344951 CYYR1Q96J86 154 aa12.08□□□□□ -0.48
CUL3-202ENST00000344951 FAM231BA6NCW3 169 aa12.08□□□□□ -0.48
CUL3-202ENST00000344951 Q0VG73 95 aa12.08□□□□□ -0.48
CUL3-202ENST00000344951 NDUFB8O95169 186 aa12.08□□□□□ -0.48
CUL3-202ENST00000344951 PFN1P07737 140 aaKnown RBP12.08□□□□□ -0.48
CUL3-202ENST00000344951 FGF6P10767 208 aa12.08□□□□□ -0.48
CUL3-202ENST00000344951 KIF26BQ2KJY2 2108 aa12.08□□□□□ -0.48
CUL3-202ENST00000344951 WFDC9Q8NEX5 89 aa12.08□□□□□ -0.48
CUL3-202ENST00000344951 SPATA25Q9BR10 227 aa12.08□□□□□ -0.48
CUL3-202ENST00000344951 LINC01559Q495D7 138 aa12.07□□□□□ -0.48
CUL3-202ENST00000344951 DOCK10Q96BY6 2186 aa12.07□□□□□ -0.48
CUL3-202ENST00000344951 BRWD3Q6RI45 1802 aa12.07□□□□□ -0.48
CUL3-202ENST00000344951 XIRP1Q702N8 1843 aaKnown RBP12.07□□□□□ -0.48
CUL3-202ENST00000344951 BUB3O43684 328 aa12.07□□□□□ -0.48
CUL3-202ENST00000344951 Q86TA4 180 aa12.07□□□□□ -0.48
CUL3-202ENST00000344951 IGKV1D-17A0A075B6S4 117 aa12.07□□□□□ -0.48
CUL3-202ENST00000344951 FREM3P0C091 2139 aa12.07□□□□□ -0.48
CUL3-202ENST00000344951 ZNF726P1Q15940 193 aa12.07□□□□□ -0.48
CUL3-202ENST00000344951 C20orf144Q9BQM9 153 aa12.07□□□□□ -0.48
CUL3-202ENST00000344951 IGKV1-6A0A0C4DH72 117 aa12.06□□□□□ -0.48
CUL3-202ENST00000344951 WIPF3A6NGB9 483 aa12.06□□□□□ -0.48
CUL3-202ENST00000344951 Q6ZS49 121 aa12.06□□□□□ -0.48
CUL3-202ENST00000344951 Q6ZWC4 215 aa12.06□□□□□ -0.48
CUL3-202ENST00000344951 C18orf32Q8TCD1 76 aa12.06□□□□□ -0.48
CUL3-202ENST00000344951 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.06□□□□□ -0.48
CUL3-202ENST00000344951 IGKV2-29A2NJV5 120 aaPredicted RBP12.06□□□□□ -0.48
CUL3-202ENST00000344951 TIRAPP58753 221 aa12.05□□□□□ -0.48
CUL3-202ENST00000344951 C10orf91Q5T1B1 145 aa12.05□□□□□ -0.48
CUL3-202ENST00000344951 K7ERJ3 54 aa12.05□□□□□ -0.48
CUL3-202ENST00000344951 ZNF503Q96F45 646 aa12.05□□□□□ -0.48
CUL3-202ENST00000344951 IGHV1OR15-1A0A075B7D0 117 aa12.05□□□□□ -0.48
CUL3-202ENST00000344951 SVIPQ8NHG7 77 aa12.05□□□□□ -0.48
CUL3-202ENST00000344951 CACNA1GO43497 2377 aa12.04□□□□□ -0.48
CUL3-202ENST00000344951 LRCOL1A6NCL2 159 aa12.04□□□□□ -0.48
CUL3-202ENST00000344951 LINC01549A6NIU2 74 aa12.04□□□□□ -0.48
CUL3-202ENST00000344951 DUX4L9Q6RFH8 374 aaPredicted RBP12.04□□□□□ -0.48
CUL3-202ENST00000344951 APRG1Q8IVJ8 170 aa12.04□□□□□ -0.48
CUL3-202ENST00000344951 SHISA9B4DS77 424 aa12.04□□□□□ -0.48
CUL3-202ENST00000344951 C2orf66Q6UXQ4 117 aa12.04□□□□□ -0.48
CUL3-202ENST00000344951 C8orf31Q8N9H6 132 aa12.04□□□□□ -0.48
CUL3-202ENST00000344951 C15orf53Q8NAA6 179 aa12.04□□□□□ -0.48
CUL3-202ENST00000344951 TET1Q8NFU7 2136 aa12.04□□□□□ -0.48
CUL3-202ENST00000344951 INTS1Q8N201 2190 aaKnown RBP12.04□□□□□ -0.48
CUL3-202ENST00000344951 IGHV2-5P01817 119 aa12.04□□□□□ -0.48
CUL3-202ENST00000344951 J3QKU1 62 aa12.03□□□□□ -0.48
CUL3-202ENST00000344951 IGHV1-69DA0A0B4J2H0 117 aa12.03□□□□□ -0.48
CUL3-202ENST00000344951 IGHV1-69P01742 117 aa12.03□□□□□ -0.48
CUL3-202ENST00000344951 NTN3O00634 580 aaPredicted RBP12.03□□□□□ -0.48
CUL3-202ENST00000344951 C8orf86Q6ZUL3 223 aa12.03□□□□□ -0.48
CUL3-202ENST00000344951 CARD19Q96LW7 228 aa12.03□□□□□ -0.48
CUL3-202ENST00000344951 CRYBA4P53673 196 aa12.03□□□□□ -0.48
CUL3-202ENST00000344951 B3GALT5-AS1P59052 145 aa12.03□□□□□ -0.48
CUL3-202ENST00000344951 GFRA4Q9GZZ7 299 aa12.03□□□□□ -0.48
CUL3-202ENST00000344951 HEATR1Q9H583 2144 aaKnown RBP12.03□□□□□ -0.48
CUL3-202ENST00000344951 SIP14410 1827 aa12.03□□□□□ -0.48
CUL3-202ENST00000344951 CFPP27918 469 aa12.03□□□□□ -0.48
CUL3-202ENST00000344951 SDHAF1A6NFY7 115 aa12.02□□□□□ -0.48
CUL3-202ENST00000344951 F8W735 103 aaPredicted RBP12.02□□□□□ -0.48
CUL3-202ENST00000344951 CFHR4Q92496 578 aa12.02□□□□□ -0.48
CUL3-202ENST00000344951 NDUFA12Q9UI09 145 aa12.02□□□□□ -0.48
CUL3-202ENST00000344951 THADAQ6YHU6 1953 aa12.02□□□□□ -0.48
CUL3-202ENST00000344951 C5orf38Q86SI9 138 aa12.02□□□□□ -0.48
CUL3-202ENST00000344951 DOPEY2Q9Y3R5 2298 aa12.02□□□□□ -0.49
CUL3-202ENST00000344951 DEFB4AO15263 64 aa12.02□□□□□ -0.49
CUL3-202ENST00000344951 WDR86Q86TI4 376 aa12.02□□□□□ -0.49
CUL3-202ENST00000344951 TSSC4Q9Y5U2 329 aaPredicted RBP12.02□□□□□ -0.49
CUL3-202ENST00000344951 ETDCA0A1B0GVM5 59 aa12.02□□□□□ -0.49
CUL3-202ENST00000344951 WFDC11Q8NEX6 87 aa12.02□□□□□ -0.49
CUL3-202ENST00000344951 F6UB75 175 aa12.02□□□□□ -0.49
CUL3-202ENST00000344951 RNF183Q96D59 192 aa12.01□□□□□ -0.49
CUL3-202ENST00000344951 DOCK9Q9BZ29 2069 aa12.01□□□□□ -0.49
CUL3-202ENST00000344951 C4orf48Q5BLP8 95 aa12.01□□□□□ -0.49
CUL3-202ENST00000344951 FOXL2NBQ6ZUU3 175 aa12.01□□□□□ -0.49
CUL3-202ENST00000344951 BOD1L2Q8IYS8 172 aa12.01□□□□□ -0.49
CUL3-202ENST00000344951 SHANK2-AS3Q9BTD1 123 aa12.01□□□□□ -0.49
CUL3-202ENST00000344951 IGLC2P0DOY2 106 aa12.01□□□□□ -0.49
CUL3-202ENST00000344951 IGLC3P0DOY3 106 aa12.01□□□□□ -0.49
CUL3-202ENST00000344951 NCR3O14931 201 aa12.01□□□□□ -0.49
CUL3-202ENST00000344951 WISP1O95388 367 aa12□□□□□ -0.49
CUL3-202ENST00000344951 NPBQ8NG41 125 aa12□□□□□ -0.49
CUL3-202ENST00000344951 RHODO00212 210 aa12□□□□□ -0.49
CUL3-202ENST00000344951 UBE2AP49459 152 aa12□□□□□ -0.49
CUL3-202ENST00000344951 SLAQ13239 276 aa12□□□□□ -0.49
CUL3-202ENST00000344951 MYO7BQ6PIF6 2116 aa12□□□□□ -0.49
CUL3-202ENST00000344951 LYPD1Q8N2G4 141 aa12□□□□□ -0.49
CUL3-202ENST00000344951 WIPF2Q8TF74 440 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms