RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 RBAKDNA6NC62 111 aa11.05□□□□□ -0.64
CBX3-201ENST00000337620 ZNF705DP0CH99 300 aaPredicted RBP11.05□□□□□ -0.64
CBX3-201ENST00000337620 ZNF705BP0CI00 300 aaPredicted RBP11.05□□□□□ -0.64
CBX3-201ENST00000337620 DEFB1P60022 68 aa11.05□□□□□ -0.64
CBX3-201ENST00000337620 DEFB114Q30KQ6 69 aa11.05□□□□□ -0.64
CBX3-201ENST00000337620 K7EQG2 157 aa11.04□□□□□ -0.64
CBX3-201ENST00000337620 PPP1R2P9O14990 202 aa11.04□□□□□ -0.64
CBX3-201ENST00000337620 PF4P02776 101 aa11.04□□□□□ -0.64
CBX3-201ENST00000337620 ZNF688P0C7X2 276 aa11.04□□□□□ -0.64
CBX3-201ENST00000337620 IBA57Q5T440 356 aaKnown RBP11.04□□□□□ -0.64
CBX3-201ENST00000337620 TMEM61Q8N0U2 210 aa11.04□□□□□ -0.64
CBX3-201ENST00000337620 FAM24BQ8N5W8 94 aa11.04□□□□□ -0.64
CBX3-201ENST00000337620 C15orf54Q8N8G6 183 aa11.04□□□□□ -0.64
CBX3-201ENST00000337620 ATRQ13535 2644 aa11.04□□□□□ -0.64
CBX3-201ENST00000337620 FBLL1A6NHQ2 334 aaKnown RBP11.03□□□□□ -0.64
CBX3-201ENST00000337620 SNRPD3P62318 126 aaKnown RBP11.03□□□□□ -0.64
CBX3-201ENST00000337620 KRTAP24-1Q3LI83 254 aa11.03□□□□□ -0.64
CBX3-201ENST00000337620 TMEM78Q5T7P6 136 aa11.03□□□□□ -0.64
CBX3-201ENST00000337620 C8orf49Q96NF6 230 aa11.03□□□□□ -0.64
CBX3-201ENST00000337620 AGPAT4-IT1Q9H0P7 198 aa11.03□□□□□ -0.64
CBX3-201ENST00000337620 TUBA4BQ9H853 241 aa11.03□□□□□ -0.64
CBX3-201ENST00000337620 CXorf65A6NEN9 183 aa11.03□□□□□ -0.64
CBX3-201ENST00000337620 F6UB75 175 aa11.03□□□□□ -0.64
CBX3-201ENST00000337620 CD300EQ496F6 205 aaPredicted RBP11.03□□□□□ -0.64
CBX3-201ENST00000337620 PSMG4Q5JS54 123 aa11.03□□□□□ -0.64
CBX3-201ENST00000337620 PRR25Q96S07 402 aa11.03□□□□□ -0.64
CBX3-201ENST00000337620 CITED1Q99966 193 aa11.03□□□□□ -0.64
CBX3-201ENST00000337620 SAP30O75446 220 aa11.02□□□□□ -0.64
CBX3-201ENST00000337620 SAPCD1Q5SSQ6 148 aa11.02□□□□□ -0.64
CBX3-201ENST00000337620 LINC00322Q6ZN03 302 aaPredicted RBP11.02□□□□□ -0.64
CBX3-201ENST00000337620 OR10J6PQ8NGY7 276 aa11.02□□□□□ -0.64
CBX3-201ENST00000337620 ZC2HC1AQ96GY0 325 aa11.02□□□□□ -0.64
CBX3-201ENST00000337620 GPR61Q9BZJ8 451 aa11.02□□□□□ -0.64
CBX3-201ENST00000337620 BIN3Q9NQY0 253 aa11.02□□□□□ -0.64
CBX3-201ENST00000337620 OSTCQ9NRP0 149 aa11.02□□□□□ -0.64
CBX3-201ENST00000337620 PRIMA1Q86XR5 153 aa11.02□□□□□ -0.65
CBX3-201ENST00000337620 NUDT10Q8NFP7 164 aa11.02□□□□□ -0.65
CBX3-201ENST00000337620 DAZAP1Q96EP5 407 aaKnown RBP11.02□□□□□ -0.65
CBX3-201ENST00000337620 NUDT11Q96G61 164 aa11.02□□□□□ -0.65
CBX3-201ENST00000337620 NDFIP1Q9BT67 221 aa11.02□□□□□ -0.65
CBX3-201ENST00000337620 SIGLEC8Q9NYZ4 499 aa11.02□□□□□ -0.65
CBX3-201ENST00000337620 ZNF705GA8MUZ8 300 aaPredicted RBP11.01□□□□□ -0.65
CBX3-201ENST00000337620 ZNF138P52744 262 aa11.01□□□□□ -0.65
CBX3-201ENST00000337620 HIST1H1AQ02539 215 aaPredicted RBP11.01□□□□□ -0.65
CBX3-201ENST00000337620 C9orf47Q6ZRZ4 202 aa11.01□□□□□ -0.65
CBX3-201ENST00000337620 OR8A1Q8NGG7 326 aa11.01□□□□□ -0.65
CBX3-201ENST00000337620 V9GYV3 84 aa11.01□□□□□ -0.65
CBX3-201ENST00000337620 CT45A10P0DMU9 189 aa11□□□□□ -0.65
CBX3-201ENST00000337620 ELOBQ15370 118 aa11□□□□□ -0.65
CBX3-201ENST00000337620 FAM231DQ6ZW35 169 aa11□□□□□ -0.65
CBX3-201ENST00000337620 COLCA2A8K830 154 aa11□□□□□ -0.65
CBX3-201ENST00000337620 GATCO43716 136 aaKnown RBP11□□□□□ -0.65
CBX3-201ENST00000337620 S100PP25815 95 aa11□□□□□ -0.65
CBX3-201ENST00000337620 ZNF492Q9P255 531 aa11□□□□□ -0.65
CBX3-201ENST00000337620 IZUMO1RA6ND01 250 aa10.99□□□□□ -0.65
CBX3-201ENST00000337620 CD33P20138 364 aa10.99□□□□□ -0.65
CBX3-201ENST00000337620 FAM3BP58499 235 aaPredicted RBP10.99□□□□□ -0.65
CBX3-201ENST00000337620 LINC00477Q96M19 166 aa10.99□□□□□ -0.65
CBX3-201ENST00000337620 FBN1P35555 2871 aaKnown RBP10.99□□□□□ -0.65
CBX3-201ENST00000337620 CA1P00915 261 aaPredicted RBP10.99□□□□□ -0.65
CBX3-201ENST00000337620 P01737 135 aa10.99□□□□□ -0.65
CBX3-201ENST00000337620 CRIP1P50238 77 aa10.99□□□□□ -0.65
CBX3-201ENST00000337620 LINC00482Q8N8I6 264 aa10.99□□□□□ -0.65
CBX3-201ENST00000337620 SORL1Q92673 2214 aa10.98□□□□□ -0.65
CBX3-201ENST00000337620 TGIF2-C20orf24A0A0A6YYL0 155 aa10.98□□□□□ -0.65
CBX3-201ENST00000337620 TRAV2A0A0B4J234 112 aa10.98□□□□□ -0.65
CBX3-201ENST00000337620 TRAV25A0A0B4J276 109 aa10.98□□□□□ -0.65
CBX3-201ENST00000337620 C19orf71A6NCJ1 209 aa10.98□□□□□ -0.65
CBX3-201ENST00000337620 NPIPB6E9PJ23 425 aa10.98□□□□□ -0.65
CBX3-201ENST00000337620 PFN1P07737 140 aaKnown RBP10.98□□□□□ -0.65
CBX3-201ENST00000337620 GDF5OSQ5U4N7 250 aa10.98□□□□□ -0.65
CBX3-201ENST00000337620 KCNIP4Q6PIL6 250 aa10.98□□□□□ -0.65
CBX3-201ENST00000337620 YPEL4Q96NS1 127 aa10.98□□□□□ -0.65
CBX3-201ENST00000337620 SPAG8Q99932 426 aaPredicted RBP10.98□□□□□ -0.65
CBX3-201ENST00000337620 IL36BQ9NZH7 164 aa10.98□□□□□ -0.65
CBX3-201ENST00000337620 OR4C46A6NHA9 309 aa10.97□□□□□ -0.65
CBX3-201ENST00000337620 A0A1W2PPQ1 181 aa10.97□□□□□ -0.65
CBX3-201ENST00000337620 CXCL1P09341 107 aa10.97□□□□□ -0.65
CBX3-201ENST00000337620 ZNF80P51504 273 aaPredicted RBP10.97□□□□□ -0.65
CBX3-201ENST00000337620 DEFB131AP59861 70 aa10.97□□□□□ -0.65
CBX3-201ENST00000337620 FAM162BQ5T6X4 162 aa10.97□□□□□ -0.65
CBX3-201ENST00000337620 EBLN2Q6P2I7 272 aa10.97□□□□□ -0.65
CBX3-201ENST00000337620 COX8CQ7Z4L0 72 aa10.97□□□□□ -0.65
CBX3-201ENST00000337620 IMMP2LQ96T52 175 aa10.97□□□□□ -0.65
CBX3-201ENST00000337620 J3KRW8 73 aa10.96□□□□□ -0.65
CBX3-201ENST00000337620 TCL1AP56279 114 aa10.96□□□□□ -0.65
CBX3-201ENST00000337620 RPP21Q9H633 154 aaKnown RBP10.96□□□□□ -0.65
CBX3-201ENST00000337620 PPP1R14DQ9NXH3 145 aa10.96□□□□□ -0.65
CBX3-201ENST00000337620 VWFP04275 2813 aa10.96□□□□□ -0.66
CBX3-201ENST00000337620 A0A0J9YX75 114 aa10.96□□□□□ -0.66
CBX3-201ENST00000337620 SH2D1AO60880 128 aa10.96□□□□□ -0.66
CBX3-201ENST00000337620 ZNF256Q9Y2P7 627 aaPredicted RBP10.96□□□□□ -0.66
CBX3-201ENST00000337620 IGKV3-20P01619 116 aa10.95□□□□□ -0.66
CBX3-201ENST00000337620 IGLV1-51P01701 117 aa10.95□□□□□ -0.66
CBX3-201ENST00000337620 OR4B1Q8NGF8 309 aa10.95□□□□□ -0.66
CBX3-201ENST00000337620 OR2D3Q8NGH3 330 aa10.95□□□□□ -0.66
CBX3-201ENST00000337620 LENEPQ9Y5L5 61 aa10.95□□□□□ -0.66
CBX3-201ENST00000337620 FAM210BQ96KR6 192 aa10.94□□□□□ -0.66
CBX3-201ENST00000337620 SAV1Q9H4B6 383 aaPredicted RBP10.94□□□□□ -0.66
CBX3-201ENST00000337620 FABP5P3A8MUU1 101 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms