RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 CT83Q5H943 113 aa13.04□□□□□ -0.32
CDC42EP4-201ENST00000335793 SIVA1O15304 175 aa13.04□□□□□ -0.32
CDC42EP4-201ENST00000335793 COX8AP10176 69 aa13.04□□□□□ -0.32
CDC42EP4-201ENST00000335793 C1RLQ9NZP8 487 aa13.03□□□□□ -0.32
CDC42EP4-201ENST00000335793 TRBV19A0A075B6N1 114 aa13.03□□□□□ -0.32
CDC42EP4-201ENST00000335793 FAM120AOSQ5T036 256 aa13.03□□□□□ -0.32
CDC42EP4-201ENST00000335793 IGFL4Q6B9Z1 124 aa13.03□□□□□ -0.32
CDC42EP4-201ENST00000335793 TTTY13Q9BZ97 58 aa13.03□□□□□ -0.32
CDC42EP4-201ENST00000335793 I3L2K1 104 aa13.03□□□□□ -0.32
CDC42EP4-201ENST00000335793 TNFRSF13BO14836 293 aaPredicted RBP13.03□□□□□ -0.32
CDC42EP4-201ENST00000335793 ZNF672Q499Z4 452 aaPredicted RBP13.02□□□□□ -0.32
CDC42EP4-201ENST00000335793 IGF2-ASQ6U949 168 aa13.02□□□□□ -0.32
CDC42EP4-201ENST00000335793 WFDC3Q8IUB2 231 aa13.02□□□□□ -0.32
CDC42EP4-201ENST00000335793 C8orf49Q96NF6 230 aa13.02□□□□□ -0.32
CDC42EP4-201ENST00000335793 GFRA4Q9GZZ7 299 aa13.02□□□□□ -0.32
CDC42EP4-201ENST00000335793 HIF1ANQ9NWT6 349 aa13.02□□□□□ -0.32
CDC42EP4-201ENST00000335793 DPM3Q9P2X0 92 aa13.02□□□□□ -0.32
CDC42EP4-201ENST00000335793 UFC1Q9Y3C8 167 aa13.02□□□□□ -0.32
CDC42EP4-201ENST00000335793 COL12A1Q99715 3063 aa13.02□□□□□ -0.32
CDC42EP4-201ENST00000335793 GRNP28799 593 aaKnown RBP13.02□□□□□ -0.33
CDC42EP4-201ENST00000335793 SFTA2Q6UW10 78 aa13.02□□□□□ -0.33
CDC42EP4-201ENST00000335793 Q8NA96 180 aa13.02□□□□□ -0.33
CDC42EP4-201ENST00000335793 RELNP78509 3460 aa13.02□□□□□ -0.33
CDC42EP4-201ENST00000335793 A1L4Q6 167 aa13.01□□□□□ -0.33
CDC42EP4-201ENST00000335793 TMEM189A5PLL7 270 aa13.01□□□□□ -0.33
CDC42EP4-201ENST00000335793 NBR2O15453 112 aa13.01□□□□□ -0.33
CDC42EP4-201ENST00000335793 PCP2Q8IVA1 136 aa13.01□□□□□ -0.33
CDC42EP4-201ENST00000335793 BCL6BQ8N143 479 aaPredicted RBP13.01□□□□□ -0.33
CDC42EP4-201ENST00000335793 NDFIP1Q9BT67 221 aa13.01□□□□□ -0.33
CDC42EP4-201ENST00000335793 SHANK2-AS3Q9BTD1 123 aa13.01□□□□□ -0.33
CDC42EP4-201ENST00000335793 PGPEP1Q9NXJ5 209 aa13.01□□□□□ -0.33
CDC42EP4-201ENST00000335793 MT-ATP8P03928 68 aa13.01□□□□□ -0.33
CDC42EP4-201ENST00000335793 C1orf122Q6ZSJ8 110 aa13.01□□□□□ -0.33
CDC42EP4-201ENST00000335793 MRPL16Q9NX20 251 aaKnown RBP13.01□□□□□ -0.33
CDC42EP4-201ENST00000335793 C5orf64Q2M2E5 130 aa13.01□□□□□ -0.33
CDC42EP4-201ENST00000335793 ZNF491Q8N8L2 437 aa13.01□□□□□ -0.33
CDC42EP4-201ENST00000335793 CITED1Q99966 193 aa13.01□□□□□ -0.33
CDC42EP4-201ENST00000335793 ANAPC13Q9BS18 74 aa13.01□□□□□ -0.33
CDC42EP4-201ENST00000335793 TRBV7-9A0A0J9YWB2 115 aa13□□□□□ -0.33
CDC42EP4-201ENST00000335793 K7EIM0 57 aa13□□□□□ -0.33
CDC42EP4-201ENST00000335793 CRYGBP07316 175 aa13□□□□□ -0.33
CDC42EP4-201ENST00000335793 PET117Q6UWS5 81 aa13□□□□□ -0.33
CDC42EP4-201ENST00000335793 TIMD4Q96H15 378 aa13□□□□□ -0.33
CDC42EP4-201ENST00000335793 C18orf15Q96N68 181 aa13□□□□□ -0.33
CDC42EP4-201ENST00000335793 NHP2Q9NX24 153 aaKnown RBP13□□□□□ -0.33
CDC42EP4-201ENST00000335793 IGKV2-40A0A087WW87 121 aaPredicted RBP13□□□□□ -0.33
CDC42EP4-201ENST00000335793 HAX1O00165 279 aa13□□□□□ -0.33
CDC42EP4-201ENST00000335793 IGKV2D-40P01614 121 aaPredicted RBP13□□□□□ -0.33
CDC42EP4-201ENST00000335793 TMEM213A2RRL7 107 aa13□□□□□ -0.33
CDC42EP4-201ENST00000335793 SYT8Q8NBV8 401 aa13□□□□□ -0.33
CDC42EP4-201ENST00000335793 IFI27P40305 119 aaPredicted RBP12.99□□□□□ -0.33
CDC42EP4-201ENST00000335793 MFAP4P55083 255 aa12.99□□□□□ -0.33
CDC42EP4-201ENST00000335793 LYZL1Q6UWQ5 148 aa12.99□□□□□ -0.33
CDC42EP4-201ENST00000335793 SPANXB1Q9NS25 103 aaPredicted RBP12.99□□□□□ -0.33
CDC42EP4-201ENST00000335793 D6R8Y8 96 aa12.99□□□□□ -0.33
CDC42EP4-201ENST00000335793 IGLV2-11P01706 119 aa12.99□□□□□ -0.33
CDC42EP4-201ENST00000335793 SMIM13P0DJ93 91 aa12.99□□□□□ -0.33
CDC42EP4-201ENST00000335793 TWIST1Q15672 202 aa12.99□□□□□ -0.33
CDC42EP4-201ENST00000335793 AMN1Q8IY45 258 aa12.99□□□□□ -0.33
CDC42EP4-201ENST00000335793 Q8TAT8 98 aa12.99□□□□□ -0.33
CDC42EP4-201ENST00000335793 TMEM14CQ9P0S9 112 aa12.99□□□□□ -0.33
CDC42EP4-201ENST00000335793 CSMD1Q96PZ7 3565 aa12.99□□□□□ -0.33
CDC42EP4-201ENST00000335793 NPIPB5A8MRT5 1133 aa12.98□□□□□ -0.33
CDC42EP4-201ENST00000335793 ORM1P02763 201 aa12.98□□□□□ -0.33
CDC42EP4-201ENST00000335793 SIGLEC15Q6ZMC9 328 aa12.98□□□□□ -0.33
CDC42EP4-201ENST00000335793 VGLL1Q99990 258 aa12.98□□□□□ -0.33
CDC42EP4-201ENST00000335793 IGHV3OR16-13A0A075B7E8 117 aa12.98□□□□□ -0.33
CDC42EP4-201ENST00000335793 IGHV3-74A0A0B4J1X5 117 aa12.98□□□□□ -0.33
CDC42EP4-201ENST00000335793 A0A1B0GWB2 263 aa12.98□□□□□ -0.33
CDC42EP4-201ENST00000335793 TCTEX1D4Q5JR98 221 aa12.98□□□□□ -0.33
CDC42EP4-201ENST00000335793 GLMPQ8WWB7 406 aa12.98□□□□□ -0.33
CDC42EP4-201ENST00000335793 PVRIGQ6DKI7 326 aa12.98□□□□□ -0.33
CDC42EP4-201ENST00000335793 CCL21O00585 134 aa12.97□□□□□ -0.33
CDC42EP4-201ENST00000335793 ID1P41134 155 aa12.97□□□□□ -0.33
CDC42EP4-201ENST00000335793 FXYD2P54710 66 aa12.97□□□□□ -0.33
CDC42EP4-201ENST00000335793 PRELID3AQ96N28 172 aa12.97□□□□□ -0.33
CDC42EP4-201ENST00000335793 SMKR1H3BMG3 65 aa12.97□□□□□ -0.33
CDC42EP4-201ENST00000335793 FCER1GP30273 86 aa12.97□□□□□ -0.33
CDC42EP4-201ENST00000335793 CKS2P33552 79 aa12.97□□□□□ -0.33
CDC42EP4-201ENST00000335793 ZNF414Q96IQ9 312 aa12.97□□□□□ -0.33
CDC42EP4-201ENST00000335793 RAB1BQ9H0U4 201 aa12.97□□□□□ -0.33
CDC42EP4-201ENST00000335793 C21orf62Q9NYP8 219 aa12.97□□□□□ -0.33
CDC42EP4-201ENST00000335793 H3BRN7 92 aa12.96□□□□□ -0.33
CDC42EP4-201ENST00000335793 BRI3O95415 125 aa12.96□□□□□ -0.33
CDC42EP4-201ENST00000335793 FAM106CPP0CH98 169 aa12.96□□□□□ -0.33
CDC42EP4-201ENST00000335793 FAM106AQ4KMX7 169 aa12.96□□□□□ -0.33
CDC42EP4-201ENST00000335793 ZNF785A8K8V0 405 aa12.96□□□□□ -0.33
CDC42EP4-201ENST00000335793 MS4A6AQ9H2W1 248 aa12.96□□□□□ -0.33
CDC42EP4-201ENST00000335793 IGHV3-66A0A0C4DH42 116 aa12.96□□□□□ -0.34
CDC42EP4-201ENST00000335793 CRIP1P50238 77 aa12.96□□□□□ -0.34
CDC42EP4-201ENST00000335793 ODF1Q14990 250 aa12.96□□□□□ -0.34
CDC42EP4-201ENST00000335793 TMEM75Q8N9X5 138 aa12.96□□□□□ -0.34
CDC42EP4-201ENST00000335793 NPIPB6E9PJ23 425 aa12.95□□□□□ -0.34
CDC42EP4-201ENST00000335793 C3orf56Q8N813 242 aa12.95□□□□□ -0.34
CDC42EP4-201ENST00000335793 TRBV20-1A0A075B6N2 111 aa12.94□□□□□ -0.34
CDC42EP4-201ENST00000335793 CRXO43186 299 aaPredicted RBP12.94□□□□□ -0.34
CDC42EP4-201ENST00000335793 SH2D1AO60880 128 aa12.94□□□□□ -0.34
CDC42EP4-201ENST00000335793 C8orf86Q6ZUL3 223 aa12.94□□□□□ -0.34
CDC42EP4-201ENST00000335793 SPG11Q96JI7 2443 aa12.94□□□□□ -0.34
CDC42EP4-201ENST00000335793 ECSCRQ19T08 205 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms