RNA–Protein interactions for RNA: ENST00000334348.7

UPK3B-202, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 2,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-202ENST00000334348 RNF185Q96GF1 192 aa12.74□□□□□ -0.37
UPK3B-202ENST00000334348 PRSS1P07477 247 aa12.73□□□□□ -0.37
UPK3B-202ENST00000334348 NXT2Q9NPJ8 142 aaKnown RBP12.73□□□□□ -0.37
UPK3B-202ENST00000334348 CTSZQ9UBR2 303 aa12.73□□□□□ -0.37
UPK3B-202ENST00000334348 ZFYVE26Q68DK2 2539 aa12.73□□□□□ -0.37
UPK3B-202ENST00000334348 IL4P05112 153 aa12.73□□□□□ -0.37
UPK3B-202ENST00000334348 BMI1P35226 326 aa12.73□□□□□ -0.37
UPK3B-202ENST00000334348 ATP6V0BQ99437 205 aa12.73□□□□□ -0.37
UPK3B-202ENST00000334348 SRSF8Q9BRL6 282 aaKnown RBP12.73□□□□□ -0.37
UPK3B-202ENST00000334348 FBXL15Q9H469 300 aa12.73□□□□□ -0.37
UPK3B-202ENST00000334348 ATP5LO75964 103 aa12.72□□□□□ -0.37
UPK3B-202ENST00000334348 GTSCR1Q86UQ5 136 aa12.72□□□□□ -0.37
UPK3B-202ENST00000334348 PRR25Q96S07 402 aa12.72□□□□□ -0.37
UPK3B-202ENST00000334348 IGHV1-3A0A0C4DH29 117 aa12.72□□□□□ -0.37
UPK3B-202ENST00000334348 DPM2O94777 84 aa12.72□□□□□ -0.37
UPK3B-202ENST00000334348 TAL2Q16559 108 aa12.72□□□□□ -0.37
UPK3B-202ENST00000334348 KLF17Q5JT82 389 aaPredicted RBP12.72□□□□□ -0.37
UPK3B-202ENST00000334348 S100A7AQ86SG5 101 aa12.72□□□□□ -0.37
UPK3B-202ENST00000334348 ICE1Q9Y2F5 2266 aa12.72□□□□□ -0.37
UPK3B-202ENST00000334348 ZC2HC1BQ5TFG8 222 aa12.71□□□□□ -0.37
UPK3B-202ENST00000334348 CCL17Q92583 94 aa12.71□□□□□ -0.37
UPK3B-202ENST00000334348 ZNF479Q96JC4 524 aa12.71□□□□□ -0.37
UPK3B-202ENST00000334348 FAM215AQ9Y5M1 114 aa12.71□□□□□ -0.37
UPK3B-202ENST00000334348 NPIPB5A8MRT5 1133 aa12.71□□□□□ -0.38
UPK3B-202ENST00000334348 FAM27E3Q08E93 113 aa12.71□□□□□ -0.38
UPK3B-202ENST00000334348 FOXC2Q99958 501 aa12.71□□□□□ -0.38
UPK3B-202ENST00000334348 CNFNQ9BYD5 112 aa12.71□□□□□ -0.38
UPK3B-202ENST00000334348 TNFRSF6BO95407 300 aa12.7□□□□□ -0.38
UPK3B-202ENST00000334348 SRSF2Q01130 221 aaKnown RBP12.7□□□□□ -0.38
UPK3B-202ENST00000334348 ADIPOQQ15848 244 aa12.7□□□□□ -0.38
UPK3B-202ENST00000334348 CCDC144NLQ6NUI1 221 aa12.7□□□□□ -0.38
UPK3B-202ENST00000334348 ZNF575Q86XF7 245 aa12.7□□□□□ -0.38
UPK3B-202ENST00000334348 SVIPQ8NHG7 77 aa12.7□□□□□ -0.38
UPK3B-202ENST00000334348 SPAG8Q99932 426 aaPredicted RBP12.7□□□□□ -0.38
UPK3B-202ENST00000334348 IGKV2-40A0A087WW87 121 aaPredicted RBP12.7□□□□□ -0.38
UPK3B-202ENST00000334348 TMEM8BA6NDV4 472 aa12.7□□□□□ -0.38
UPK3B-202ENST00000334348 IGKV2D-40P01614 121 aaPredicted RBP12.7□□□□□ -0.38
UPK3B-202ENST00000334348 IGLV1-47P01700 117 aa12.7□□□□□ -0.38
UPK3B-202ENST00000334348 KAAG1Q9UBP8 84 aa12.7□□□□□ -0.38
UPK3B-202ENST00000334348 TLN1Q9Y490 2541 aaKnown RBP12.69□□□□□ -0.38
UPK3B-202ENST00000334348 GAS8-AS1O95177 125 aa12.69□□□□□ -0.38
UPK3B-202ENST00000334348 ZNF80P51504 273 aaPredicted RBP12.69□□□□□ -0.38
UPK3B-202ENST00000334348 C12orf74Q32Q52 190 aa12.69□□□□□ -0.38
UPK3B-202ENST00000334348 MSRB1Q9NZV6 116 aa12.69□□□□□ -0.38
UPK3B-202ENST00000334348 H3BMG7 143 aa12.69□□□□□ -0.38
UPK3B-202ENST00000334348 C16orf97H3BN30 126 aa12.69□□□□□ -0.38
UPK3B-202ENST00000334348 SH2D6Q7Z4S9 175 aa12.69□□□□□ -0.38
UPK3B-202ENST00000334348 ZNF502Q8TBZ5 544 aa12.69□□□□□ -0.38
UPK3B-202ENST00000334348 TMEM158Q8WZ71 300 aa12.69□□□□□ -0.38
UPK3B-202ENST00000334348 BUB1B-PAK6H3BSN5 160 aa12.68□□□□□ -0.38
UPK3B-202ENST00000334348 ETDBQ3ZM63 59 aa12.68□□□□□ -0.38
UPK3B-202ENST00000334348 TMEM108Q6UXF1 575 aa12.68□□□□□ -0.38
UPK3B-202ENST00000334348 IGSF10Q6WRI0 2623 aa12.68□□□□□ -0.38
UPK3B-202ENST00000334348 PLCE1Q9P212 2302 aa12.68□□□□□ -0.38
UPK3B-202ENST00000334348 MAPKAPK5-AS1Q8N8E1 139 aa12.67□□□□□ -0.38
UPK3B-202ENST00000334348 ARPC1AQ92747 370 aa12.67□□□□□ -0.38
UPK3B-202ENST00000334348 PSMG3-AS1Q96PY0 264 aa12.67□□□□□ -0.38
UPK3B-202ENST00000334348 RNF5Q99942 180 aa12.67□□□□□ -0.38
UPK3B-202ENST00000334348 RAB1BQ9H0U4 201 aa12.67□□□□□ -0.38
UPK3B-202ENST00000334348 K7EMI3 77 aa12.67□□□□□ -0.38
UPK3B-202ENST00000334348 CNIH1O95406 144 aa12.67□□□□□ -0.38
UPK3B-202ENST00000334348 GAGE13Q4V321 117 aa12.67□□□□□ -0.38
UPK3B-202ENST00000334348 Q8N8P6 123 aa12.67□□□□□ -0.38
UPK3B-202ENST00000334348 TMEM160Q9NX00 188 aa12.67□□□□□ -0.38
UPK3B-202ENST00000334348 PRO0461Q9UI25 63 aa12.67□□□□□ -0.38
UPK3B-202ENST00000334348 ABCA1O95477 2261 aa12.67□□□□□ -0.38
UPK3B-202ENST00000334348 SVILO95425 2214 aa12.67□□□□□ -0.38
UPK3B-202ENST00000334348 TRAV40A0A0B4J280 105 aa12.66□□□□□ -0.38
UPK3B-202ENST00000334348 DEFB109BQ30KR1 87 aa12.66□□□□□ -0.38
UPK3B-202ENST00000334348 TTC9CQ8N5M4 171 aa12.66□□□□□ -0.38
UPK3B-202ENST00000334348 Q8TAT8 98 aa12.66□□□□□ -0.38
UPK3B-202ENST00000334348 IGLV2-18A0A075B6J9 118 aa12.65□□□□□ -0.38
UPK3B-202ENST00000334348 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.65□□□□□ -0.38
UPK3B-202ENST00000334348 DLX1P56177 255 aa12.65□□□□□ -0.38
UPK3B-202ENST00000334348 RRN3P1Q2M238 152 aa12.65□□□□□ -0.38
UPK3B-202ENST00000334348 TCTEX1D4Q5JR98 221 aa12.65□□□□□ -0.38
UPK3B-202ENST00000334348 MRPL35Q9NZE8 188 aaKnown RBP12.65□□□□□ -0.38
UPK3B-202ENST00000334348 ORM1P02763 201 aa12.65□□□□□ -0.38
UPK3B-202ENST00000334348 GFRALQ6UXV0 394 aa12.65□□□□□ -0.38
UPK3B-202ENST00000334348 CLUHP3Q96NS8 147 aa12.65□□□□□ -0.38
UPK3B-202ENST00000334348 CACNA1BQ00975 2339 aa12.65□□□□□ -0.38
UPK3B-202ENST00000334348 CFAP46Q8IYW2 2715 aa12.65□□□□□ -0.38
UPK3B-202ENST00000334348 RPL7P18124 248 aaKnown RBP12.64□□□□□ -0.39
UPK3B-202ENST00000334348 RAB9AP51151 201 aa12.64□□□□□ -0.39
UPK3B-202ENST00000334348 AMTNQ6UX39 209 aa12.64□□□□□ -0.39
UPK3B-202ENST00000334348 A0A1B0GWB2 263 aa12.64□□□□□ -0.39
UPK3B-202ENST00000334348 FABP5P3A8MUU1 101 aa12.64□□□□□ -0.39
UPK3B-202ENST00000334348 GATA1P15976 413 aaPredicted RBP12.64□□□□□ -0.39
UPK3B-202ENST00000334348 CKS1BP61024 79 aa12.64□□□□□ -0.39
UPK3B-202ENST00000334348 MYOZ3Q8TDC0 251 aa12.64□□□□□ -0.39
UPK3B-202ENST00000334348 RPEQ96AT9 228 aa12.64□□□□□ -0.39
UPK3B-202ENST00000334348 HIST1H4GQ99525 98 aa12.64□□□□□ -0.39
UPK3B-202ENST00000334348 PRB3Q04118 309 aaPredicted RBP12.63□□□□□ -0.39
UPK3B-202ENST00000334348 DTX2Q86UW9 622 aa12.63□□□□□ -0.39
UPK3B-202ENST00000334348 SPTA1P02549 2419 aa12.63□□□□□ -0.39
UPK3B-202ENST00000334348 LINC01619G3V211 115 aa12.63□□□□□ -0.39
UPK3B-202ENST00000334348 ZNF48Q96MX3 618 aaPredicted RBP12.63□□□□□ -0.39
UPK3B-202ENST00000334348 TRBV7-3A0A075B6L6 115 aa12.62□□□□□ -0.39
UPK3B-202ENST00000334348 A0A087WX48 190 aa12.62□□□□□ -0.39
UPK3B-202ENST00000334348 PRSS47A8MTI9 375 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms