RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 IGHV2-70DA0A0C4DH43 119 aa13.5□□□□□ -0.25
COL9A1-201ENST00000320755 CKS2P33552 79 aa13.5□□□□□ -0.25
COL9A1-201ENST00000320755 GAGE1Q13065 139 aa13.5□□□□□ -0.25
COL9A1-201ENST00000320755 A0A1B0GW15 77 aa13.5□□□□□ -0.25
COL9A1-201ENST00000320755 ORMDL3Q8N138 153 aa13.5□□□□□ -0.25
COL9A1-201ENST00000320755 UBE2E1P51965 193 aa13.49□□□□□ -0.25
COL9A1-201ENST00000320755 PIP4P2Q8N4L2 257 aa13.49□□□□□ -0.25
COL9A1-201ENST00000320755 UQCRFS1P47985 274 aa13.49□□□□□ -0.25
COL9A1-201ENST00000320755 ZNF502Q8TBZ5 544 aa13.49□□□□□ -0.25
COL9A1-201ENST00000320755 CSPG4Q6UVK1 2322 aa13.49□□□□□ -0.25
COL9A1-201ENST00000320755 EFNA4P52798 201 aa13.48□□□□□ -0.25
COL9A1-201ENST00000320755 AJUBAQ96IF1 538 aa13.48□□□□□ -0.25
COL9A1-201ENST00000320755 GOSR1O95249 250 aa13.48□□□□□ -0.25
COL9A1-201ENST00000320755 BMI1P35226 326 aa13.48□□□□□ -0.25
COL9A1-201ENST00000320755 PTTG1IPP53801 180 aa13.48□□□□□ -0.25
COL9A1-201ENST00000320755 FAM110DQ8TAY7 271 aaPredicted RBP13.48□□□□□ -0.25
COL9A1-201ENST00000320755 A0A087X0K7 114 aa13.47□□□□□ -0.25
COL9A1-201ENST00000320755 NPYP01303 97 aa13.47□□□□□ -0.25
COL9A1-201ENST00000320755 FOSL1P15407 271 aa13.47□□□□□ -0.25
COL9A1-201ENST00000320755 ZNF493Q6ZR52 646 aa13.47□□□□□ -0.25
COL9A1-201ENST00000320755 IL17RELQ6ZVW7 336 aa13.47□□□□□ -0.25
COL9A1-201ENST00000320755 C19orf84I3L1E1 186 aa13.47□□□□□ -0.25
COL9A1-201ENST00000320755 BUB3O43684 328 aa13.47□□□□□ -0.25
COL9A1-201ENST00000320755 GAS8-AS1O95177 125 aa13.47□□□□□ -0.25
COL9A1-201ENST00000320755 CCDC140Q96MF4 163 aa13.47□□□□□ -0.25
COL9A1-201ENST00000320755 LMO4P61968 165 aa13.46□□□□□ -0.25
COL9A1-201ENST00000320755 A0A096LNJ9 63 aa13.46□□□□□ -0.25
COL9A1-201ENST00000320755 FOXE3Q13461 319 aa13.46□□□□□ -0.25
COL9A1-201ENST00000320755 LINC01545Q5VT33 79 aa13.46□□□□□ -0.25
COL9A1-201ENST00000320755 BRD3OSQ6XYD6 125 aa13.46□□□□□ -0.25
COL9A1-201ENST00000320755 NHLH1Q02575 133 aa13.45□□□□□ -0.26
COL9A1-201ENST00000320755 PRSS57Q6UWY2 283 aa13.45□□□□□ -0.26
COL9A1-201ENST00000320755 ZFAND3Q9H8U3 227 aa13.45□□□□□ -0.26
COL9A1-201ENST00000320755 FABP5P3A8MUU1 101 aa13.45□□□□□ -0.26
COL9A1-201ENST00000320755 CCL25O15444 150 aa13.45□□□□□ -0.26
COL9A1-201ENST00000320755 ZNF738Q8NE65 137 aa13.45□□□□□ -0.26
COL9A1-201ENST00000320755 COX11Q9Y6N1 276 aa13.45□□□□□ -0.26
COL9A1-201ENST00000320755 J3KRW8 73 aa13.45□□□□□ -0.26
COL9A1-201ENST00000320755 NPFFO15130 113 aa13.45□□□□□ -0.26
COL9A1-201ENST00000320755 EVI2AP22794 236 aa13.45□□□□□ -0.26
COL9A1-201ENST00000320755 C18orf15Q96N68 181 aa13.45□□□□□ -0.26
COL9A1-201ENST00000320755 SCRT2Q9NQ03 307 aa13.45□□□□□ -0.26
COL9A1-201ENST00000320755 SELENOKQ9Y6D0 94 aa13.45□□□□□ -0.26
COL9A1-201ENST00000320755 PKD1L2Q7Z442 2459 aa13.45□□□□□ -0.26
COL9A1-201ENST00000320755 CENPVL3A0A0U1RRI6 287 aa13.44□□□□□ -0.26
COL9A1-201ENST00000320755 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.44□□□□□ -0.26
COL9A1-201ENST00000320755 GATD1Q8NB37 220 aa13.44□□□□□ -0.26
COL9A1-201ENST00000320755 CACNG7P62955 275 aa13.44□□□□□ -0.26
COL9A1-201ENST00000320755 Q6ZQT7 251 aa13.44□□□□□ -0.26
COL9A1-201ENST00000320755 ZNF575Q86XF7 245 aa13.44□□□□□ -0.26
COL9A1-201ENST00000320755 GATA1P15976 413 aaPredicted RBP13.43□□□□□ -0.26
COL9A1-201ENST00000320755 ABCA2Q9BZC7 2435 aa13.43□□□□□ -0.26
COL9A1-201ENST00000320755 CLPSL1A2RUU4 121 aa13.43□□□□□ -0.26
COL9A1-201ENST00000320755 CBY3A6NI87 242 aa13.43□□□□□ -0.26
COL9A1-201ENST00000320755 TMEM190Q8WZ59 177 aa13.43□□□□□ -0.26
COL9A1-201ENST00000320755 AGPAT4-IT1Q9H0P7 198 aa13.43□□□□□ -0.26
COL9A1-201ENST00000320755 FLNCQ14315 2725 aa13.43□□□□□ -0.26
COL9A1-201ENST00000320755 VAMP3Q15836 100 aa13.42□□□□□ -0.26
COL9A1-201ENST00000320755 ORAOV1Q8WV07 137 aa13.42□□□□□ -0.26
COL9A1-201ENST00000320755 IGLC6P0CF74 106 aa13.42□□□□□ -0.26
COL9A1-201ENST00000320755 GNLYP22749 145 aa13.42□□□□□ -0.26
COL9A1-201ENST00000320755 RPS20P60866 119 aaKnown RBP13.42□□□□□ -0.26
COL9A1-201ENST00000320755 EEF1AKMT3Q96AZ1 226 aa13.42□□□□□ -0.26
COL9A1-201ENST00000320755 METTL26Q96S19 204 aa13.42□□□□□ -0.26
COL9A1-201ENST00000320755 S100A7P31151 101 aa13.41□□□□□ -0.26
COL9A1-201ENST00000320755 LY6EQ16553 131 aa13.41□□□□□ -0.26
COL9A1-201ENST00000320755 ANKRD39Q53RE8 183 aa13.41□□□□□ -0.26
COL9A1-201ENST00000320755 BVES-AS1Q5T3Y7 98 aa13.41□□□□□ -0.26
COL9A1-201ENST00000320755 U3KQK5 164 aa13.41□□□□□ -0.26
COL9A1-201ENST00000320755 HBDP02042 147 aa13.41□□□□□ -0.26
COL9A1-201ENST00000320755 CRYBG3Q68DQ2 2970 aa13.4□□□□□ -0.26
COL9A1-201ENST00000320755 CENPEQ02224 2701 aa13.4□□□□□ -0.26
COL9A1-201ENST00000320755 ATP5G2Q06055 141 aa13.4□□□□□ -0.26
COL9A1-201ENST00000320755 ITLN2Q8WWU7 325 aaPredicted RBP13.4□□□□□ -0.26
COL9A1-201ENST00000320755 C11orf21Q9P2W6 132 aa13.4□□□□□ -0.26
COL9A1-201ENST00000320755 CELSR2Q9HCU4 2923 aa13.4□□□□□ -0.26
COL9A1-201ENST00000320755 CFAP46Q8IYW2 2715 aa13.4□□□□□ -0.26
COL9A1-201ENST00000320755 IGKV3-7A0A075B6H7 116 aa13.4□□□□□ -0.26
COL9A1-201ENST00000320755 C5orf56Q8N8D9 126 aa13.4□□□□□ -0.26
COL9A1-201ENST00000320755 MS4A6AQ9H2W1 248 aa13.4□□□□□ -0.26
COL9A1-201ENST00000320755 CACNA1AO00555 2505 aa13.39□□□□□ -0.27
COL9A1-201ENST00000320755 TMEM78Q5T7P6 136 aa13.39□□□□□ -0.27
COL9A1-201ENST00000320755 C8orf86Q6ZUL3 223 aa13.39□□□□□ -0.27
COL9A1-201ENST00000320755 COX8CQ7Z4L0 72 aa13.39□□□□□ -0.27
COL9A1-201ENST00000320755 IFI27L1Q96BM0 104 aa13.39□□□□□ -0.27
COL9A1-201ENST00000320755 USP9YO00507 2555 aaPredicted RBP13.39□□□□□ -0.27
COL9A1-201ENST00000320755 TRAV40A0A0B4J280 105 aa13.38□□□□□ -0.27
COL9A1-201ENST00000320755 IGKV3D-20A0A0C4DH25 116 aa13.38□□□□□ -0.27
COL9A1-201ENST00000320755 SPRY2O43597 315 aa13.38□□□□□ -0.27
COL9A1-201ENST00000320755 IGHV4-39P01824 125 aa13.38□□□□□ -0.27
COL9A1-201ENST00000320755 TRGV3P03979 118 aa13.38□□□□□ -0.27
COL9A1-201ENST00000320755 DEFB1P60022 68 aa13.38□□□□□ -0.27
COL9A1-201ENST00000320755 RNF185Q96GF1 192 aa13.38□□□□□ -0.27
COL9A1-201ENST00000320755 MYO18BQ8IUG5 2567 aa13.38□□□□□ -0.27
COL9A1-201ENST00000320755 DOPEY2Q9Y3R5 2298 aa13.38□□□□□ -0.27
COL9A1-201ENST00000320755 TRAV8-2A0A0B4J237 113 aa13.38□□□□□ -0.27
COL9A1-201ENST00000320755 FBLL1A6NHQ2 334 aaKnown RBP13.38□□□□□ -0.27
COL9A1-201ENST00000320755 C16orf92Q96LL3 132 aa13.38□□□□□ -0.27
COL9A1-201ENST00000320755 UFC1Q9Y3C8 167 aa13.38□□□□□ -0.27
COL9A1-201ENST00000320755 UTP20O75691 2785 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms