RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 SH2D1AO60880 128 aa14.03□□□□□ -0.16
CCDC43-201ENST00000315286 FAM209BQ5JX69 171 aa14.03□□□□□ -0.16
CCDC43-201ENST00000315286 ESDP10768 282 aa14.02□□□□□ -0.16
CCDC43-201ENST00000315286 ZNF80P51504 273 aaPredicted RBP14.02□□□□□ -0.16
CCDC43-201ENST00000315286 OR10J3Q5JRS4 329 aa14.02□□□□□ -0.16
CCDC43-201ENST00000315286 FAM162BQ5T6X4 162 aa14.02□□□□□ -0.16
CCDC43-201ENST00000315286 PEF1Q9UBV8 284 aaKnown RBP14.02□□□□□ -0.16
CCDC43-201ENST00000315286 PRDM13Q9H4Q3 707 aa14.02□□□□□ -0.17
CCDC43-201ENST00000315286 GSN-AS1Q9NRJ2 163 aa14.02□□□□□ -0.17
CCDC43-201ENST00000315286 RBAKDNA6NC62 111 aa14.01□□□□□ -0.17
CCDC43-201ENST00000315286 JOSD1Q15040 202 aaPredicted RBP14.01□□□□□ -0.17
CCDC43-201ENST00000315286 TM4SF20Q53R12 229 aa14□□□□□ -0.17
CCDC43-201ENST00000315286 C16orf92Q96LL3 132 aa14□□□□□ -0.17
CCDC43-201ENST00000315286 ZNF702PQ9H963 129 aa14□□□□□ -0.17
CCDC43-201ENST00000315286 TMSB15BA0A087X1C1 80 aa14□□□□□ -0.17
CCDC43-201ENST00000315286 TMEM189A5PLL7 270 aa14□□□□□ -0.17
CCDC43-201ENST00000315286 HAX1O00165 279 aa14□□□□□ -0.17
CCDC43-201ENST00000315286 GPHB5Q86YW7 130 aa14□□□□□ -0.17
CCDC43-201ENST00000315286 MRPL53Q96EL3 112 aaKnown RBP14□□□□□ -0.17
CCDC43-201ENST00000315286 RCHY1Q96PM5 261 aa14□□□□□ -0.17
CCDC43-201ENST00000315286 AGPAT4-IT1Q9H0P7 198 aa14□□□□□ -0.17
CCDC43-201ENST00000315286 A0A1W2PS18 150 aa13.99□□□□□ -0.17
CCDC43-201ENST00000315286 TMEM89A2RUT3 159 aa13.99□□□□□ -0.17
CCDC43-201ENST00000315286 NDFIP1Q9BT67 221 aa13.99□□□□□ -0.17
CCDC43-201ENST00000315286 PDZD2O15018 2839 aa13.99□□□□□ -0.17
CCDC43-201ENST00000315286 FLNAP21333 2647 aaKnown RBP13.99□□□□□ -0.17
CCDC43-201ENST00000315286 A0A1B0GUT8 65 aa13.99□□□□□ -0.17
CCDC43-201ENST00000315286 RPLP1P05386 114 aaKnown RBP13.99□□□□□ -0.17
CCDC43-201ENST00000315286 ARMS2P0C7Q2 107 aa13.99□□□□□ -0.17
CCDC43-201ENST00000315286 IL17RELQ6ZVW7 336 aa13.99□□□□□ -0.17
CCDC43-201ENST00000315286 C18orf32Q8TCD1 76 aa13.99□□□□□ -0.17
CCDC43-201ENST00000315286 DUX5Q96PT3 197 aa13.99□□□□□ -0.17
CCDC43-201ENST00000315286 ALKBH7Q9BT30 221 aaPredicted RBP13.99□□□□□ -0.17
CCDC43-201ENST00000315286 IGHV7-4-1A0A0J9YVY3 117 aa13.98□□□□□ -0.17
CCDC43-201ENST00000315286 S100A12P80511 92 aa13.98□□□□□ -0.17
CCDC43-201ENST00000315286 IQCJQ1A5X6 159 aa13.98□□□□□ -0.17
CCDC43-201ENST00000315286 C20orf173Q96LM9 149 aa13.98□□□□□ -0.17
CCDC43-201ENST00000315286 TPPP3Q9BW30 176 aa13.98□□□□□ -0.17
CCDC43-201ENST00000315286 RHPN1-AS1Q9BWJ2 59 aa13.98□□□□□ -0.17
CCDC43-201ENST00000315286 DAZ1Q9NQZ3 744 aaKnown RBP13.98□□□□□ -0.17
CCDC43-201ENST00000315286 SONP18583 2426 aaKnown RBP13.98□□□□□ -0.17
CCDC43-201ENST00000315286 BMI1P35226 326 aa13.97□□□□□ -0.17
CCDC43-201ENST00000315286 PAFAH1B2P68402 229 aa13.97□□□□□ -0.17
CCDC43-201ENST00000315286 ITPR2Q14571 2701 aa13.97□□□□□ -0.17
CCDC43-201ENST00000315286 EDN2P20800 178 aa13.97□□□□□ -0.17
CCDC43-201ENST00000315286 SIGLECL1Q8N7X8 197 aa13.97□□□□□ -0.17
CCDC43-201ENST00000315286 CLEC5AQ9NY25 188 aa13.97□□□□□ -0.17
CCDC43-201ENST00000315286 SOCS3O14543 225 aa13.96□□□□□ -0.17
CCDC43-201ENST00000315286 RIGQ13278 110 aa13.96□□□□□ -0.17
CCDC43-201ENST00000315286 FAM106AQ4KMX7 169 aa13.96□□□□□ -0.17
CCDC43-201ENST00000315286 DNLZQ5SXM8 178 aa13.96□□□□□ -0.17
CCDC43-201ENST00000315286 Q6AWC8 147 aa13.96□□□□□ -0.17
CCDC43-201ENST00000315286 ZNF575Q86XF7 245 aa13.96□□□□□ -0.17
CCDC43-201ENST00000315286 SELENOKQ9Y6D0 94 aa13.96□□□□□ -0.17
CCDC43-201ENST00000315286 ZNF138P52744 262 aa13.95□□□□□ -0.18
CCDC43-201ENST00000315286 RPL11P62913 178 aaKnown RBP13.95□□□□□ -0.18
CCDC43-201ENST00000315286 KLF5Q13887 457 aaPredicted RBP13.95□□□□□ -0.18
CCDC43-201ENST00000315286 TMEM78Q5T7P6 136 aa13.95□□□□□ -0.18
CCDC43-201ENST00000315286 C9orf47Q6ZRZ4 202 aa13.95□□□□□ -0.18
CCDC43-201ENST00000315286 SMPXQ9UHP9 88 aa13.95□□□□□ -0.18
CCDC43-201ENST00000315286 FABP5P3A8MUU1 101 aa13.95□□□□□ -0.18
CCDC43-201ENST00000315286 K7EMT4 169 aa13.95□□□□□ -0.18
CCDC43-201ENST00000315286 LYZL1Q6UWQ5 148 aa13.95□□□□□ -0.18
CCDC43-201ENST00000315286 SAMD10Q9BYL1 202 aa13.95□□□□□ -0.18
CCDC43-201ENST00000315286 MYO9AB2RTY4 2548 aa13.94□□□□□ -0.18
CCDC43-201ENST00000315286 ZNF705DP0CH99 300 aaPredicted RBP13.94□□□□□ -0.18
CCDC43-201ENST00000315286 ZNF705BP0CI00 300 aaPredicted RBP13.94□□□□□ -0.18
CCDC43-201ENST00000315286 FOXE3Q13461 319 aa13.94□□□□□ -0.18
CCDC43-201ENST00000315286 ZNF738Q8NE65 137 aa13.94□□□□□ -0.18
CCDC43-201ENST00000315286 NRN1Q9NPD7 142 aa13.94□□□□□ -0.18
CCDC43-201ENST00000315286 IGKV3-7A0A075B6H7 116 aa13.94□□□□□ -0.18
CCDC43-201ENST00000315286 GPX1P07203 203 aa13.94□□□□□ -0.18
CCDC43-201ENST00000315286 ELANEP08246 267 aa13.94□□□□□ -0.18
CCDC43-201ENST00000315286 CD33P20138 364 aa13.94□□□□□ -0.18
CCDC43-201ENST00000315286 Q6ZWC4 215 aa13.94□□□□□ -0.18
CCDC43-201ENST00000315286 KCNS1Q96KK3 526 aa13.94□□□□□ -0.18
CCDC43-201ENST00000315286 LOC102724200A0A096LPH7 203 aaPredicted RBP13.93□□□□□ -0.18
CCDC43-201ENST00000315286 ORM1P02763 201 aa13.93□□□□□ -0.18
CCDC43-201ENST00000315286 MYOZ3Q8TDC0 251 aa13.93□□□□□ -0.18
CCDC43-201ENST00000315286 RPS20P60866 119 aaKnown RBP13.92□□□□□ -0.18
CCDC43-201ENST00000315286 SSTP61278 116 aa13.92□□□□□ -0.18
CCDC43-201ENST00000315286 BORCS7Q96B45 105 aa13.92□□□□□ -0.18
CCDC43-201ENST00000315286 SRSF2Q01130 221 aaKnown RBP13.92□□□□□ -0.18
CCDC43-201ENST00000315286 GATD1Q8NB37 220 aa13.92□□□□□ -0.18
CCDC43-201ENST00000315286 MUC21A0A0G2JKD1 596 aa13.91□□□□□ -0.18
CCDC43-201ENST00000315286 MUC21A0A140T8X8 626 aa13.91□□□□□ -0.18
CCDC43-201ENST00000315286 A0A1B0GW15 77 aa13.91□□□□□ -0.18
CCDC43-201ENST00000315286 SRD5A1P18405 259 aa13.91□□□□□ -0.18
CCDC43-201ENST00000315286 AMTP48728 403 aa13.91□□□□□ -0.18
CCDC43-201ENST00000315286 DEFB1P60022 68 aa13.91□□□□□ -0.18
CCDC43-201ENST00000315286 MUC21Q5SSG8 566 aa13.91□□□□□ -0.18
CCDC43-201ENST00000315286 Q8N2B8 174 aa13.91□□□□□ -0.18
CCDC43-201ENST00000315286 PPP1R14DQ9NXH3 145 aa13.91□□□□□ -0.18
CCDC43-201ENST00000315286 UFC1Q9Y3C8 167 aa13.91□□□□□ -0.18
CCDC43-201ENST00000315286 FAM181BA6NEQ2 426 aa13.91□□□□□ -0.18
CCDC43-201ENST00000315286 LGALS1P09382 135 aaKnown RBP13.91□□□□□ -0.18
CCDC43-201ENST00000315286 PMCHP20382 165 aa13.91□□□□□ -0.18
CCDC43-201ENST00000315286 UNC79Q9P2D8 2635 aa13.9□□□□□ -0.18
CCDC43-201ENST00000315286 TMEM213A2RRL7 107 aa13.9□□□□□ -0.18
CCDC43-201ENST00000315286 ZNF324O75467 553 aaPredicted RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms