RNA–Protein interactions for RNA: ENST00000315212.3

RNASEH1-201, Transcript of ribonuclease H1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNASEH1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNASEH1-201ENST00000315212 ZMAT5Q9UDW3 170 aaKnown RBP11.38□□□□□ -0.59
RNASEH1-201ENST00000315212 TMEM250H0YL14 139 aa11.37□□□□□ -0.59
RNASEH1-201ENST00000315212 CXorf1O96002 111 aa11.37□□□□□ -0.59
RNASEH1-201ENST00000315212 FRMD6-AS1P0C7T7 363 aa11.37□□□□□ -0.59
RNASEH1-201ENST00000315212 RPL35AP18077 110 aaKnown RBP11.37□□□□□ -0.59
RNASEH1-201ENST00000315212 UBE2G2P60604 165 aa11.37□□□□□ -0.59
RNASEH1-201ENST00000315212 SNRPD3P62318 126 aaKnown RBP11.37□□□□□ -0.59
RNASEH1-201ENST00000315212 SLC50A1Q9BRV3 221 aa11.37□□□□□ -0.59
RNASEH1-201ENST00000315212 RNF24Q9Y225 148 aa11.37□□□□□ -0.59
RNASEH1-201ENST00000315212 YTHDF2Q9Y5A9 579 aaKnown RBP11.37□□□□□ -0.59
RNASEH1-201ENST00000315212 COL7A1Q02388 2944 aa11.37□□□□□ -0.59
RNASEH1-201ENST00000315212 IGKV3-20P01619 116 aa11.36□□□□□ -0.59
RNASEH1-201ENST00000315212 CXCL1P09341 107 aa11.36□□□□□ -0.59
RNASEH1-201ENST00000315212 ID1P41134 155 aa11.36□□□□□ -0.59
RNASEH1-201ENST00000315212 RPL35P42766 123 aaKnown RBP11.36□□□□□ -0.59
RNASEH1-201ENST00000315212 ELOBQ15370 118 aa11.36□□□□□ -0.59
RNASEH1-201ENST00000315212 PSG3Q16557 428 aa11.36□□□□□ -0.59
RNASEH1-201ENST00000315212 ZNF738Q8NE65 137 aa11.36□□□□□ -0.59
RNASEH1-201ENST00000315212 SMIM7Q9BQ49 75 aa11.36□□□□□ -0.59
RNASEH1-201ENST00000315212 Q9H3A6 140 aa11.36□□□□□ -0.59
RNASEH1-201ENST00000315212 C5orf52A6NGY3 159 aa11.36□□□□□ -0.59
RNASEH1-201ENST00000315212 FAM110AQ9BQ89 295 aa11.36□□□□□ -0.59
RNASEH1-201ENST00000315212 NAT8Q9UHE5 227 aa11.36□□□□□ -0.59
RNASEH1-201ENST00000315212 GGTLC3B5MD39 225 aa11.35□□□□□ -0.59
RNASEH1-201ENST00000315212 ZNF253O75346 499 aa11.35□□□□□ -0.59
RNASEH1-201ENST00000315212 RPS10P46783 165 aaKnown RBP11.35□□□□□ -0.59
RNASEH1-201ENST00000315212 SNRPEP62304 92 aaKnown RBP11.35□□□□□ -0.59
RNASEH1-201ENST00000315212 GNG5P63218 68 aa11.35□□□□□ -0.59
RNASEH1-201ENST00000315212 ZNF674Q2M3X9 581 aa11.35□□□□□ -0.59
RNASEH1-201ENST00000315212 LINC00322Q6ZN03 302 aaPredicted RBP11.35□□□□□ -0.59
RNASEH1-201ENST00000315212 ASCL2Q99929 193 aa11.35□□□□□ -0.59
RNASEH1-201ENST00000315212 TMEM242Q9NWH2 141 aa11.35□□□□□ -0.59
RNASEH1-201ENST00000315212 PDE6HQ13956 83 aa11.34□□□□□ -0.59
RNASEH1-201ENST00000315212 TMEM241Q24JQ0 296 aa11.34□□□□□ -0.59
RNASEH1-201ENST00000315212 RPUSD4Q96CM3 377 aaKnown RBP11.34□□□□□ -0.59
RNASEH1-201ENST00000315212 CTDSP1Q9GZU7 261 aa11.34□□□□□ -0.59
RNASEH1-201ENST00000315212 URGCP-MRPS24S4R325 110 aa11.34□□□□□ -0.59
RNASEH1-201ENST00000315212 IGKV2-40A0A087WW87 121 aaPredicted RBP11.34□□□□□ -0.59
RNASEH1-201ENST00000315212 A0A0J9YX75 114 aa11.34□□□□□ -0.59
RNASEH1-201ENST00000315212 H3BMM0 161 aa11.34□□□□□ -0.59
RNASEH1-201ENST00000315212 IGKV2D-40P01614 121 aaPredicted RBP11.34□□□□□ -0.59
RNASEH1-201ENST00000315212 FXYD7P58549 80 aa11.34□□□□□ -0.59
RNASEH1-201ENST00000315212 TRPT1Q86TN4 253 aaKnown RBP11.34□□□□□ -0.59
RNASEH1-201ENST00000315212 NBEAL2Q6ZNJ1 2754 aa11.34□□□□□ -0.59
RNASEH1-201ENST00000315212 PAGE4O60829 102 aa11.33□□□□□ -0.6
RNASEH1-201ENST00000315212 ERCC8Q13216 396 aa11.33□□□□□ -0.6
RNASEH1-201ENST00000315212 ADIRFQ15847 76 aa11.33□□□□□ -0.6
RNASEH1-201ENST00000315212 RPH3ALQ9UNE2 315 aa11.33□□□□□ -0.6
RNASEH1-201ENST00000315212 TENM3Q9P273 2699 aa11.33□□□□□ -0.6
RNASEH1-201ENST00000315212 PGPA6NDG6 321 aa11.32□□□□□ -0.6
RNASEH1-201ENST00000315212 HLA-DRB4P13762 266 aa11.32□□□□□ -0.6
RNASEH1-201ENST00000315212 CNN1P51911 297 aaKnown RBP11.32□□□□□ -0.6
RNASEH1-201ENST00000315212 PSG9Q00887 426 aa11.32□□□□□ -0.6
RNASEH1-201ENST00000315212 HIST1H1AQ02539 215 aaPredicted RBP11.32□□□□□ -0.6
RNASEH1-201ENST00000315212 FOXI2Q6ZQN5 318 aa11.32□□□□□ -0.6
RNASEH1-201ENST00000315212 HLA-DRB4X5D2U9 266 aa11.32□□□□□ -0.6
RNASEH1-201ENST00000315212 TGIF2-C20orf24A0A0A6YYL0 155 aa11.32□□□□□ -0.6
RNASEH1-201ENST00000315212 A8MZ25 164 aa11.32□□□□□ -0.6
RNASEH1-201ENST00000315212 C11orf94C9JXX5 98 aa11.32□□□□□ -0.6
RNASEH1-201ENST00000315212 UBE2CO00762 179 aa11.32□□□□□ -0.6
RNASEH1-201ENST00000315212 PDE6DO43924 150 aa11.32□□□□□ -0.6
RNASEH1-201ENST00000315212 GIG44P09565 113 aaPredicted RBP11.32□□□□□ -0.6
RNASEH1-201ENST00000315212 ATP5G3P48201 142 aa11.32□□□□□ -0.6
RNASEH1-201ENST00000315212 SBSPONQ8IVN8 264 aa11.32□□□□□ -0.6
RNASEH1-201ENST00000315212 STHQ8IWL8 128 aa11.32□□□□□ -0.6
RNASEH1-201ENST00000315212 OR4B1Q8NGF8 309 aa11.32□□□□□ -0.6
RNASEH1-201ENST00000315212 OR8A1Q8NGG7 326 aa11.32□□□□□ -0.6
RNASEH1-201ENST00000315212 PARLQ9H300 379 aa11.32□□□□□ -0.6
RNASEH1-201ENST00000315212 RETNQ9HD89 108 aa11.32□□□□□ -0.6
RNASEH1-201ENST00000315212 TMEM167BQ9NRX6 74 aa11.32□□□□□ -0.6
RNASEH1-201ENST00000315212 SAMD13Q5VXD3 122 aa11.31□□□□□ -0.6
RNASEH1-201ENST00000315212 CST9LP1Q5W188 147 aa11.31□□□□□ -0.6
RNASEH1-201ENST00000315212 VGLL1Q99990 258 aa11.31□□□□□ -0.6
RNASEH1-201ENST00000315212 TXNDC17Q9BRA2 123 aa11.31□□□□□ -0.6
RNASEH1-201ENST00000315212 AAMDCQ9H7C9 122 aa11.31□□□□□ -0.6
RNASEH1-201ENST00000315212 OTORQ9NRC9 128 aa11.31□□□□□ -0.6
RNASEH1-201ENST00000315212 S100A8P05109 93 aa11.3□□□□□ -0.6
RNASEH1-201ENST00000315212 CMC4P56277 68 aaPredicted RBP11.3□□□□□ -0.6
RNASEH1-201ENST00000315212 RPL23P62829 140 aaKnown RBP11.3□□□□□ -0.6
RNASEH1-201ENST00000315212 SUMO1P63165 101 aaKnown RBP11.3□□□□□ -0.6
RNASEH1-201ENST00000315212 AMTNQ6UX39 209 aa11.3□□□□□ -0.6
RNASEH1-201ENST00000315212 TCEAL7Q9BRU2 100 aa11.3□□□□□ -0.6
RNASEH1-201ENST00000315212 LOC102724200A0A096LPH7 203 aaPredicted RBP11.29□□□□□ -0.6
RNASEH1-201ENST00000315212 F6UZH7 168 aa11.29□□□□□ -0.6
RNASEH1-201ENST00000315212 PHOX2AO14813 284 aa11.29□□□□□ -0.6
RNASEH1-201ENST00000315212 CTAG1AP78358 180 aa11.29□□□□□ -0.6
RNASEH1-201ENST00000315212 FABP9Q0Z7S8 132 aa11.29□□□□□ -0.6
RNASEH1-201ENST00000315212 KIR3DS1Q14943 382 aa11.29□□□□□ -0.6
RNASEH1-201ENST00000315212 SGK494Q96LW2 274 aa11.29□□□□□ -0.6
RNASEH1-201ENST00000315212 CLEC5AQ9NY25 188 aa11.29□□□□□ -0.6
RNASEH1-201ENST00000315212 DIRC3C9JPN6 131 aa11.29□□□□□ -0.6
RNASEH1-201ENST00000315212 SLC25A5P05141 298 aaKnown RBP11.29□□□□□ -0.6
RNASEH1-201ENST00000315212 S100PP25815 95 aa11.29□□□□□ -0.6
RNASEH1-201ENST00000315212 EBLN2Q6P2I7 272 aa11.29□□□□□ -0.6
RNASEH1-201ENST00000315212 Q8TAT8 98 aa11.29□□□□□ -0.6
RNASEH1-201ENST00000315212 MRPL53Q96EL3 112 aaKnown RBP11.29□□□□□ -0.6
RNASEH1-201ENST00000315212 FAM210BQ96KR6 192 aa11.29□□□□□ -0.6
RNASEH1-201ENST00000315212 C12orf57Q99622 126 aa11.29□□□□□ -0.6
RNASEH1-201ENST00000315212 TRAV8-1A0A0A6YYK1 113 aa11.28□□□□□ -0.6
RNASEH1-201ENST00000315212 A8MTW9 85 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms