RNA–Protein interactions for RNA: ENST00000315212.3

RNASEH1-201, Transcript of ribonuclease H1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNASEH1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNASEH1-201ENST00000315212 NISCHQ9Y2I1 1504 aa36.89■■■■□ 3.5
RNASEH1-201ENST00000315212 CCDC180Q9P1Z9 1646 aa32.6■■■□□ 2.81
RNASEH1-201ENST00000315212 ABCC9O60706 1549 aa31.56■■■□□ 2.64
RNASEH1-201ENST00000315212 ZCCHC6Q5VYS8 1495 aaKnown RBP30.85■■■□□ 2.53
RNASEH1-201ENST00000315212 DCAF8L2P0C7V8 631 aa30.64■■■□□ 2.5
RNASEH1-201ENST00000315212 NACADO15069 1562 aa30.47■■■□□ 2.47
RNASEH1-201ENST00000315212 DCAF1Q9Y4B6 1507 aa30.44■■■□□ 2.46
RNASEH1-201ENST00000315212 RB1CC1Q8TDY2 1594 aa30.43■■■□□ 2.46
RNASEH1-201ENST00000315212 MYO15BQ96JP2 1530 aa30.36■■■□□ 2.45
RNASEH1-201ENST00000315212 UNC13AQ9UPW8 1703 aa30■■■□□ 2.39
RNASEH1-201ENST00000315212 SCRIBQ14160 1630 aa29.92■■■□□ 2.38
RNASEH1-201ENST00000315212 BICRAQ9NZM4 1560 aa29.64■■■□□ 2.34
RNASEH1-201ENST00000315212 SHROOM4Q9ULL8 1493 aa29.55■■■□□ 2.32
RNASEH1-201ENST00000315212 PABPN1Q86U42 306 aaKnown RBP eCLIP29.55■■■□□ 2.32
RNASEH1-201ENST00000315212 CECR2Q9BXF3 1484 aa28.8■■■□□ 2.2
RNASEH1-201ENST00000315212 EIF4G1Q04637 1599 aaKnown RBP28.76■■■□□ 2.19
RNASEH1-201ENST00000315212 DNAJC5BQ9UF47 199 aa28.6■■■□□ 2.17
RNASEH1-201ENST00000315212 SMARCA4P51532 1647 aa28.59■■■□□ 2.17
RNASEH1-201ENST00000315212 CC2D2AQ9P2K1 1620 aa28.57■■■□□ 2.16
RNASEH1-201ENST00000315212 MROH2BQ7Z745 1585 aa28.53■■■□□ 2.16
RNASEH1-201ENST00000315212 BAZ1AQ9NRL2 1556 aaPredicted RBP28.53■■■□□ 2.16
RNASEH1-201ENST00000315212 WIZO95785 1651 aa28.3■■■□□ 2.12
RNASEH1-201ENST00000315212 RSF1Q96T23 1441 aaPredicted RBP28.29■■■□□ 2.12
RNASEH1-201ENST00000315212 ATAD2BQ9ULI0 1458 aa28.26■■■□□ 2.11
RNASEH1-201ENST00000315212 PEG3Q9GZU2 1588 aa28.23■■■□□ 2.11
RNASEH1-201ENST00000315212 SMARCA2P51531 1590 aa28.18■■■□□ 2.1
RNASEH1-201ENST00000315212 NCAPD3P42695 1498 aa28.11■■■□□ 2.09
RNASEH1-201ENST00000315212 HMGXB3Q12766 1538 aa28.05■■■□□ 2.08
RNASEH1-201ENST00000315212 BAZ1BQ9UIG0 1483 aaKnown RBP28.04■■■□□ 2.08
RNASEH1-201ENST00000315212 SUPT5HO00267 1087 aaKnown RBP27.93■■■□□ 2.06
RNASEH1-201ENST00000315212 TOP2AP11388 1531 aaKnown RBP27.9■■■□□ 2.06
RNASEH1-201ENST00000315212 CCDC88BA6NC98 1476 aa27.59■■■□□ 2.01
RNASEH1-201ENST00000315212 NESP48681 1621 aa27.5■■□□□ 1.99
RNASEH1-201ENST00000315212 LAMC3Q9Y6N6 1575 aa27.33■■□□□ 1.96
RNASEH1-201ENST00000315212 CADPSQ9ULU8 1353 aa27.32■■□□□ 1.96
RNASEH1-201ENST00000315212 CFTRP13569 1480 aa27.28■■□□□ 1.96
RNASEH1-201ENST00000315212 PRDM2Q13029 1718 aa27.24■■□□□ 1.95
RNASEH1-201ENST00000315212 KIF21AQ7Z4S6 1674 aa27.22■■□□□ 1.95
RNASEH1-201ENST00000315212 FANCD2Q9BXW9 1451 aa27.06■■□□□ 1.92
RNASEH1-201ENST00000315212 ERCC6Q03468 1493 aa27.06■■□□□ 1.92
RNASEH1-201ENST00000315212 PDS5BQ9NTI5 1447 aa27.05■■□□□ 1.92
RNASEH1-201ENST00000315212 CEP164Q9UPV0 1460 aa26.97■■□□□ 1.91
RNASEH1-201ENST00000315212 THOC2Q8NI27 1593 aaKnown RBP26.96■■□□□ 1.91
RNASEH1-201ENST00000315212 URB2Q14146 1524 aaKnown RBP26.84■■□□□ 1.89
RNASEH1-201ENST00000315212 MRC2Q9UBG0 1479 aa26.84■■□□□ 1.89
RNASEH1-201ENST00000315212 ABCC8Q09428 1581 aa26.84■■□□□ 1.89
RNASEH1-201ENST00000315212 WDR62O43379 1518 aa26.77■■□□□ 1.88
RNASEH1-201ENST00000315212 CUX1P39880 1505 aa26.73■■□□□ 1.87
RNASEH1-201ENST00000315212 TOPBP1Q92547 1522 aa26.71■■□□□ 1.87
RNASEH1-201ENST00000315212 DNMBPQ6XZF7 1577 aa26.7■■□□□ 1.86
RNASEH1-201ENST00000315212 SYNJ1O43426 1573 aa26.68■■□□□ 1.86
RNASEH1-201ENST00000315212 WRNQ14191 1432 aaPredicted RBP eCLIP26.62■■□□□ 1.85
RNASEH1-201ENST00000315212 BIVM-ERCC5R4GMW8 1640 aa26.59■■□□□ 1.85
RNASEH1-201ENST00000315212 TOP2BQ02880 1626 aa26.56■■□□□ 1.84
RNASEH1-201ENST00000315212 CUX2O14529 1486 aa26.56■■□□□ 1.84
RNASEH1-201ENST00000315212 FGD5Q6ZNL6 1462 aa26.53■■□□□ 1.84
RNASEH1-201ENST00000315212 POLA1P09884 1462 aaPredicted RBP26.52■■□□□ 1.84
RNASEH1-201ENST00000315212 RAD54L2Q9Y4B4 1467 aa26.45■■□□□ 1.82
RNASEH1-201ENST00000315212 TARBP1Q13395 1621 aaKnown RBP26.43■■□□□ 1.82
RNASEH1-201ENST00000315212 WDR97A6NE52 1622 aa26.37■■□□□ 1.81
RNASEH1-201ENST00000315212 ZNF608Q9ULD9 1512 aaPredicted RBP26.35■■□□□ 1.81
RNASEH1-201ENST00000315212 IFT140Q96RY7 1462 aa26.35■■□□□ 1.81
RNASEH1-201ENST00000315212 SOGA1O94964 1423 aa26.34■■□□□ 1.81
RNASEH1-201ENST00000315212 CHIC1Q5VXU3 224 aa26.3■■□□□ 1.8
RNASEH1-201ENST00000315212 EIF4G3O43432 1585 aaKnown RBP26.26■■□□□ 1.79
RNASEH1-201ENST00000315212 TRIM41Q8WV44 630 aa26.25■■□□□ 1.79
RNASEH1-201ENST00000315212 ABCA10Q8WWZ4 1543 aa26.23■■□□□ 1.79
RNASEH1-201ENST00000315212 TDRD9Q8NDG6 1382 aaKnown RBP26.21■■□□□ 1.79
RNASEH1-201ENST00000315212 AQRO60306 1485 aaKnown RBP eCLIP26.21■■□□□ 1.79
RNASEH1-201ENST00000315212 ABCA5Q8WWZ7 1642 aa26.18■■□□□ 1.78
RNASEH1-201ENST00000315212 PBRM1Q86U86 1689 aa26.13■■□□□ 1.77
RNASEH1-201ENST00000315212 RUSC2Q8N2Y8 1516 aa26.1■■□□□ 1.77
RNASEH1-201ENST00000315212 GAPVD1Q14C86 1478 aa26.07■■□□□ 1.76
RNASEH1-201ENST00000315212 GRIN2BQ13224 1484 aa25.97■■□□□ 1.75
RNASEH1-201ENST00000315212 SNAPC4Q5SXM2 1469 aa25.97■■□□□ 1.75
RNASEH1-201ENST00000315212 KIF27Q86VH2 1401 aa25.97■■□□□ 1.75
RNASEH1-201ENST00000315212 ERICH3Q5RHP9 1530 aa25.91■■□□□ 1.74
RNASEH1-201ENST00000315212 CHD1O14646 1710 aa25.9■■□□□ 1.74
RNASEH1-201ENST00000315212 ADAMTS12P58397 1594 aa25.89■■□□□ 1.74
RNASEH1-201ENST00000315212 IGF1RP08069 1367 aa25.86■■□□□ 1.73
RNASEH1-201ENST00000315212 FAM9AQ8IZU1 332 aaPredicted RBP25.85■■□□□ 1.73
RNASEH1-201ENST00000315212 MAGI1Q96QZ7 1491 aaPredicted RBP25.85■■□□□ 1.73
RNASEH1-201ENST00000315212 CUL7Q14999 1698 aa25.8■■□□□ 1.72
RNASEH1-201ENST00000315212 SYNJ2O15056 1496 aa25.76■■□□□ 1.71
RNASEH1-201ENST00000315212 FHAD1B1AJZ9 1412 aa25.74■■□□□ 1.71
RNASEH1-201ENST00000315212 FBLN2P98095 1184 aa25.74■■□□□ 1.71
RNASEH1-201ENST00000315212 EEA1Q15075 1411 aa25.71■■□□□ 1.71
RNASEH1-201ENST00000315212 CARMIL1Q5VZK9 1371 aa25.69■■□□□ 1.7
RNASEH1-201ENST00000315212 GRIN2AQ12879 1464 aa25.69■■□□□ 1.7
RNASEH1-201ENST00000315212 CSRNP3Q8WYN3 585 aa25.67■■□□□ 1.7
RNASEH1-201ENST00000315212 CHMP7Q8WUX9 453 aaPredicted RBP25.66■■□□□ 1.7
RNASEH1-201ENST00000315212 PRXQ9BXM0 1461 aa25.65■■□□□ 1.7
RNASEH1-201ENST00000315212 CEP170Q5SW79 1584 aa25.64■■□□□ 1.7
RNASEH1-201ENST00000315212 RAPGEF2Q9Y4G8 1499 aa25.6■■□□□ 1.69
RNASEH1-201ENST00000315212 EHMT2Q96KQ7 1210 aa25.57■■□□□ 1.68
RNASEH1-201ENST00000315212 KIF21BO75037 1637 aa25.57■■□□□ 1.68
RNASEH1-201ENST00000315212 NUP160Q12769 1436 aa25.54■■□□□ 1.68
RNASEH1-201ENST00000315212 CLASP1Q7Z460 1538 aa25.53■■□□□ 1.68
RNASEH1-201ENST00000315212 OSCARQ8IYS5 282 aa25.5■■□□□ 1.67
RNASEH1-201ENST00000315212 CTTNBP2Q8WZ74 1663 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms