RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 TMEM78Q5T7P6 136 aa16.94■□□□□ 0.3
IRF3-201ENST00000309877 RNASE7Q9H1E1 156 aaKnown RBP16.94■□□□□ 0.3
IRF3-201ENST00000309877 OSTCQ9NRP0 149 aa16.94■□□□□ 0.3
IRF3-201ENST00000309877 IBA57Q5T440 356 aaKnown RBP16.93■□□□□ 0.3
IRF3-201ENST00000309877 TMEM61Q8N0U2 210 aa16.93■□□□□ 0.3
IRF3-201ENST00000309877 OR10J6PQ8NGY7 276 aa16.93■□□□□ 0.3
IRF3-201ENST00000309877 Q8TAT8 98 aa16.93■□□□□ 0.3
IRF3-201ENST00000309877 CITED1Q99966 193 aa16.93■□□□□ 0.3
IRF3-201ENST00000309877 NDFIP1Q9BT67 221 aa16.93■□□□□ 0.3
IRF3-201ENST00000309877 NIPBLQ6KC79 2804 aaeCLIP16.93■□□□□ 0.31e-8■□□□□ 8.7
IRF3-201ENST00000309877 KRTAP24-1Q3LI83 254 aa16.92■□□□□ 0.3
IRF3-201ENST00000309877 PRR25Q96S07 402 aa16.92■□□□□ 0.3
IRF3-201ENST00000309877 AGPAT4-IT1Q9H0P7 198 aa16.92■□□□□ 0.3
IRF3-201ENST00000309877 ZNF688P0C7X2 276 aa16.91■□□□□ 0.3
IRF3-201ENST00000309877 CD300EQ496F6 205 aaPredicted RBP16.91■□□□□ 0.3
IRF3-201ENST00000309877 PSMG4Q5JS54 123 aa16.91■□□□□ 0.3
IRF3-201ENST00000309877 C9orf47Q6ZRZ4 202 aa16.91■□□□□ 0.3
IRF3-201ENST00000309877 FAM24BQ8N5W8 94 aa16.91■□□□□ 0.3
IRF3-201ENST00000309877 URGCP-MRPS24S4R325 110 aa16.91■□□□□ 0.3
IRF3-201ENST00000309877 TRAV2A0A0B4J234 112 aa16.91■□□□□ 0.3
IRF3-201ENST00000309877 ZNF138P52744 262 aa16.91■□□□□ 0.3
IRF3-201ENST00000309877 FAM231DQ6ZW35 169 aa16.91■□□□□ 0.3
IRF3-201ENST00000309877 DAZAP1Q96EP5 407 aaKnown RBP16.91■□□□□ 0.3
IRF3-201ENST00000309877 C8orf49Q96NF6 230 aa16.91■□□□□ 0.3
IRF3-201ENST00000309877 TRAV25A0A0B4J276 109 aa16.9■□□□□ 0.3
IRF3-201ENST00000309877 SAP30O75446 220 aa16.9■□□□□ 0.3
IRF3-201ENST00000309877 ZNF705DP0CH99 300 aaPredicted RBP16.9■□□□□ 0.3
IRF3-201ENST00000309877 ZNF705BP0CI00 300 aaPredicted RBP16.9■□□□□ 0.3
IRF3-201ENST00000309877 CT45A10P0DMU9 189 aa16.9■□□□□ 0.3
IRF3-201ENST00000309877 OR8A1Q8NGG7 326 aa16.9■□□□□ 0.3
IRF3-201ENST00000309877 ZC2HC1AQ96GY0 325 aa16.9■□□□□ 0.3
IRF3-201ENST00000309877 JMJD1CQ15652 2540 aa16.89■□□□□ 0.29
IRF3-201ENST00000309877 S100PP25815 95 aa16.89■□□□□ 0.29
IRF3-201ENST00000309877 HIST1H1AQ02539 215 aaPredicted RBP16.89■□□□□ 0.29
IRF3-201ENST00000309877 NUDT10Q8NFP7 164 aa16.89■□□□□ 0.29
IRF3-201ENST00000309877 NUDT11Q96G61 164 aa16.89■□□□□ 0.29
IRF3-201ENST00000309877 LINC00477Q96M19 166 aa16.89■□□□□ 0.29
IRF3-201ENST00000309877 ZNF492Q9P255 531 aa16.89■□□□□ 0.29
IRF3-201ENST00000309877 ZNF705GA8MUZ8 300 aaPredicted RBP16.88■□□□□ 0.29
IRF3-201ENST00000309877 GATCO43716 136 aaKnown RBP16.88■□□□□ 0.29
IRF3-201ENST00000309877 DEFB1P60022 68 aa16.88■□□□□ 0.29
IRF3-201ENST00000309877 PRIMA1Q86XR5 153 aa16.88■□□□□ 0.29
IRF3-201ENST00000309877 GPR61Q9BZJ8 451 aa16.88■□□□□ 0.29
IRF3-201ENST00000309877 V9GYV3 84 aa16.88■□□□□ 0.29
IRF3-201ENST00000309877 NPIPB6E9PJ23 425 aa16.88■□□□□ 0.29
IRF3-201ENST00000309877 F6UB75 175 aa16.88■□□□□ 0.29
IRF3-201ENST00000309877 SMUG1Q53HV7 270 aa16.87■□□□□ 0.29
IRF3-201ENST00000309877 KCNIP4Q6PIL6 250 aa16.87■□□□□ 0.29
IRF3-201ENST00000309877 LINC00322Q6ZN03 302 aaPredicted RBP16.87■□□□□ 0.29
IRF3-201ENST00000309877 LINC00482Q8N8I6 264 aa16.87■□□□□ 0.29
IRF3-201ENST00000309877 SPAG8Q99932 426 aaPredicted RBP16.87■□□□□ 0.29
IRF3-201ENST00000309877 OR4C46A6NHA9 309 aa16.86■□□□□ 0.29
IRF3-201ENST00000309877 COLCA2A8K830 154 aa16.86■□□□□ 0.29
IRF3-201ENST00000309877 P01737 135 aa16.86■□□□□ 0.29
IRF3-201ENST00000309877 ELOBQ15370 118 aa16.86■□□□□ 0.29
IRF3-201ENST00000309877 COX8CQ7Z4L0 72 aa16.86■□□□□ 0.29
IRF3-201ENST00000309877 IMMP2LQ96T52 175 aa16.86■□□□□ 0.29
IRF3-201ENST00000309877 PPP1R14DQ9NXH3 145 aa16.86■□□□□ 0.29
IRF3-201ENST00000309877 TEP1Q99973 2627 aaKnown RBP16.86■□□□□ 0.29
IRF3-201ENST00000309877 C19orf71A6NCJ1 209 aa16.85■□□□□ 0.29
IRF3-201ENST00000309877 IL36BQ9NZH7 164 aa16.85■□□□□ 0.29
IRF3-201ENST00000309877 PFN1P07737 140 aaKnown RBP16.85■□□□□ 0.29
IRF3-201ENST00000309877 EBLN2Q6P2I7 272 aa16.85■□□□□ 0.29
IRF3-201ENST00000309877 YPEL4Q96NS1 127 aa16.85■□□□□ 0.29
IRF3-201ENST00000309877 LENEPQ9Y5L5 61 aa16.85■□□□□ 0.29
IRF3-201ENST00000309877 IZUMO1RA6ND01 250 aa16.84■□□□□ 0.29
IRF3-201ENST00000309877 FAM162BQ5T6X4 162 aa16.84■□□□□ 0.29
IRF3-201ENST00000309877 CRIP1P50238 77 aa16.83■□□□□ 0.28
IRF3-201ENST00000309877 RPP21Q9H633 154 aaKnown RBP16.83■□□□□ 0.28
IRF3-201ENST00000309877 TGIF2-C20orf24A0A0A6YYL0 155 aa16.82■□□□□ 0.28
IRF3-201ENST00000309877 CD33P20138 364 aa16.82■□□□□ 0.28
IRF3-201ENST00000309877 FAM3BP58499 235 aaPredicted RBP16.82■□□□□ 0.28
IRF3-201ENST00000309877 DEFB131AP59861 70 aa16.82■□□□□ 0.28
IRF3-201ENST00000309877 A0A0J9YX75 114 aa16.81■□□□□ 0.28
IRF3-201ENST00000309877 SH2D1AO60880 128 aa16.81■□□□□ 0.28
IRF3-201ENST00000309877 IGLV1-51P01701 117 aa16.81■□□□□ 0.28
IRF3-201ENST00000309877 GDF5OSQ5U4N7 250 aa16.81■□□□□ 0.28
IRF3-201ENST00000309877 OR4B1Q8NGF8 309 aa16.81■□□□□ 0.28
IRF3-201ENST00000309877 OR2K2Q8NGT1 345 aa16.81■□□□□ 0.28
IRF3-201ENST00000309877 MAST4O15021 2626 aa16.81■□□□□ 0.28
IRF3-201ENST00000309877 A0A1W2PPQ1 181 aa16.81■□□□□ 0.28
IRF3-201ENST00000309877 CA1P00915 261 aaPredicted RBP16.81■□□□□ 0.28
IRF3-201ENST00000309877 FOXI2Q6ZQN5 318 aa16.81■□□□□ 0.28
IRF3-201ENST00000309877 ZNF747Q9BV97 191 aa16.81■□□□□ 0.28
IRF3-201ENST00000309877 WNK1Q9H4A3 2382 aa16.8■□□□□ 0.28
IRF3-201ENST00000309877 DUSP14O95147 198 aaKnown RBP16.8■□□□□ 0.28
IRF3-201ENST00000309877 CXCL1P09341 107 aa16.8■□□□□ 0.28
IRF3-201ENST00000309877 ZNF80P51504 273 aaPredicted RBP16.8■□□□□ 0.28
IRF3-201ENST00000309877 OR2D3Q8NGH3 330 aa16.8■□□□□ 0.28
IRF3-201ENST00000309877 SAV1Q9H4B6 383 aaPredicted RBP16.8■□□□□ 0.28
IRF3-201ENST00000309877 ZNF256Q9Y2P7 627 aaPredicted RBP16.8■□□□□ 0.28
IRF3-201ENST00000309877 FABP5P3A8MUU1 101 aa16.79■□□□□ 0.28
IRF3-201ENST00000309877 CT83Q5H943 113 aa16.79■□□□□ 0.28
IRF3-201ENST00000309877 MAP6D1Q9H9H5 199 aa16.79■□□□□ 0.28
IRF3-201ENST00000309877 TRBV24-1A0A075B6N3 115 aa16.78■□□□□ 0.28
IRF3-201ENST00000309877 TRBV7-9A0A0J9YWB2 115 aa16.78■□□□□ 0.28
IRF3-201ENST00000309877 A8MWL6 223 aa16.78■□□□□ 0.28
IRF3-201ENST00000309877 TCL1AP56279 114 aa16.78■□□□□ 0.28
IRF3-201ENST00000309877 C3orf56Q8N813 242 aa16.78■□□□□ 0.28
IRF3-201ENST00000309877 FAM210BQ96KR6 192 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms