RNA–Protein interactions for RNA: ENST00000308488.10

RSF1-201, Transcript of remodeling and spacing factor 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RSF1, Length 11,550 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSF1-201ENST00000308488 RETNQ9HD89 108 aa6.37□□□□□ -1.39
RSF1-201ENST00000308488 WNT9BO14905 357 aa6.37□□□□□ -1.39
RSF1-201ENST00000308488 METRNQ9UJH8 293 aa6.37□□□□□ -1.39
RSF1-201ENST00000308488 K7EMI3 77 aa6.37□□□□□ -1.39
RSF1-201ENST00000308488 DUTP33316 252 aaKnown RBP6.37□□□□□ -1.39
RSF1-201ENST00000308488 Q6P435 159 aa6.37□□□□□ -1.39
RSF1-201ENST00000308488 LY6G5BQ8NDX9 201 aa6.37□□□□□ -1.39
RSF1-201ENST00000308488 UCN2Q96RP3 112 aa6.37□□□□□ -1.39
RSF1-201ENST00000308488 ACACBO00763 2458 aa6.36□□□□□ -1.39
RSF1-201ENST00000308488 TLN2Q9Y4G6 2542 aa6.36□□□□□ -1.39
RSF1-201ENST00000308488 FAM60AQ9NP50 221 aa6.36□□□□□ -1.39
RSF1-201ENST00000308488 MSRB2Q9Y3D2 182 aa6.36□□□□□ -1.39
RSF1-201ENST00000308488 SERP1Q9Y6X1 66 aa6.36□□□□□ -1.39
RSF1-201ENST00000308488 APELAP0DMC3 54 aa6.36□□□□□ -1.39
RSF1-201ENST00000308488 SIGLEC9Q9Y336 463 aa6.36□□□□□ -1.39
RSF1-201ENST00000308488 RNF152Q8N8N0 203 aa6.36□□□□□ -1.39
RSF1-201ENST00000308488 CEP192Q8TEP8 1941 aa6.36□□□□□ -1.39
RSF1-201ENST00000308488 IGLV3-21P80748 117 aaPredicted RBP6.36□□□□□ -1.39
RSF1-201ENST00000308488 LINC00526Q96FQ7 95 aa6.36□□□□□ -1.39
RSF1-201ENST00000308488 ABCA2Q9BZC7 2435 aa6.36□□□□□ -1.39
RSF1-201ENST00000308488 CCL4L1Q8NHW4 92 aa6.36□□□□□ -1.39
RSF1-201ENST00000308488 RBAKDNA6NC62 111 aa6.36□□□□□ -1.39
RSF1-201ENST00000308488 Q6ZRM9 215 aa6.36□□□□□ -1.39
RSF1-201ENST00000308488 CSRP1P21291 193 aaKnown RBP6.36□□□□□ -1.39
RSF1-201ENST00000308488 IGFBPL1Q8WX77 278 aa6.36□□□□□ -1.39
RSF1-201ENST00000308488 IGKV3D-7A0A0C4DH55 119 aa6.35□□□□□ -1.39
RSF1-201ENST00000308488 C4orf51C9J302 202 aa6.35□□□□□ -1.39
RSF1-201ENST00000308488 SHISA5Q8N114 240 aa6.35□□□□□ -1.39
RSF1-201ENST00000308488 LYZL4Q96KX0 146 aa6.35□□□□□ -1.39
RSF1-201ENST00000308488 LIFP15018 202 aa6.35□□□□□ -1.39
RSF1-201ENST00000308488 RPS28P62857 69 aaKnown RBP6.35□□□□□ -1.39
RSF1-201ENST00000308488 GFERP55789 205 aa6.35□□□□□ -1.39
RSF1-201ENST00000308488 TCL1BO95988 128 aa6.35□□□□□ -1.39
RSF1-201ENST00000308488 IGHV3-48P01763 117 aa6.35□□□□□ -1.39
RSF1-201ENST00000308488 MYOD1P15172 320 aa6.35□□□□□ -1.39
RSF1-201ENST00000308488 MLST8Q9BVC4 326 aa6.35□□□□□ -1.39
RSF1-201ENST00000308488 DEFB118Q96PH6 123 aa6.35□□□□□ -1.39
RSF1-201ENST00000308488 LINC00312Q9Y6C7 94 aa6.35□□□□□ -1.39
RSF1-201ENST00000308488 CXCL12P48061 93 aa6.35□□□□□ -1.39
RSF1-201ENST00000308488 PATE1Q8WXA2 126 aa6.35□□□□□ -1.39
RSF1-201ENST00000308488 CFAP126Q5VTH2 177 aa6.35□□□□□ -1.39
RSF1-201ENST00000308488 FANCD2OSQ96PS1 177 aa6.35□□□□□ -1.39
RSF1-201ENST00000308488 REPIN1Q9BWE0 567 aaKnown RBP6.35□□□□□ -1.39
RSF1-201ENST00000308488 FAM90A1Q86YD7 464 aa6.34□□□□□ -1.39
RSF1-201ENST00000308488 PPDPFQ9H3Y8 114 aa6.34□□□□□ -1.39
RSF1-201ENST00000308488 TMEM74BQ9NUR3 256 aa6.34□□□□□ -1.39
RSF1-201ENST00000308488 WDR87Q6ZQQ6 2873 aa6.34□□□□□ -1.39
RSF1-201ENST00000308488 ITGBL1O95965 494 aaPredicted RBP6.34□□□□□ -1.39
RSF1-201ENST00000308488 TRBV19A0A075B6N1 114 aa6.34□□□□□ -1.39
RSF1-201ENST00000308488 COX7A1P24310 79 aa6.34□□□□□ -1.39
RSF1-201ENST00000308488 ECSCRQ19T08 205 aa6.34□□□□□ -1.39
RSF1-201ENST00000308488 ZNF625Q96I27 306 aaPredicted RBP6.34□□□□□ -1.39
RSF1-201ENST00000308488 F8WDY8 70 aa6.34□□□□□ -1.39
RSF1-201ENST00000308488 IGHV3-64A0A075B6Q5 118 aa6.34□□□□□ -1.39
RSF1-201ENST00000308488 RSPO2Q6UXX9 243 aaPredicted RBP6.34□□□□□ -1.39
RSF1-201ENST00000308488 Q8TCH9 128 aa6.34□□□□□ -1.39
RSF1-201ENST00000308488 C10orf105Q8TEF2 133 aa6.34□□□□□ -1.39
RSF1-201ENST00000308488 BAALCQ8WXS3 180 aa6.34□□□□□ -1.39
RSF1-201ENST00000308488 SMIM2Q9BVW6 85 aa6.34□□□□□ -1.39
RSF1-201ENST00000308488 PRDM6Q9NQX0 595 aa6.34□□□□□ -1.39
RSF1-201ENST00000308488 KIAA1671Q9BY89 1806 aa6.34□□□□□ -1.4
RSF1-201ENST00000308488 LTAP01374 205 aa6.34□□□□□ -1.4
RSF1-201ENST00000308488 RNASE4P34096 147 aaKnown RBP6.33□□□□□ -1.4
RSF1-201ENST00000308488 SLC25A53Q5H9E4 307 aa6.33□□□□□ -1.4
RSF1-201ENST00000308488 C2orf66Q6UXQ4 117 aa6.33□□□□□ -1.4
RSF1-201ENST00000308488 COL18A1P39060 1754 aa6.33□□□□□ -1.4
RSF1-201ENST00000308488 TM4SF5O14894 197 aa6.33□□□□□ -1.4
RSF1-201ENST00000308488 IGFBP6P24592 240 aaPredicted RBP6.33□□□□□ -1.4
RSF1-201ENST00000308488 LINC00158P58513 81 aa6.33□□□□□ -1.4
RSF1-201ENST00000308488 EXOC3-AS1Q8N2X6 119 aa6.33□□□□□ -1.4
RSF1-201ENST00000308488 WFDC11Q8NEX6 87 aa6.33□□□□□ -1.4
RSF1-201ENST00000308488 PAX4O43316 350 aa6.33□□□□□ -1.4
RSF1-201ENST00000308488 OOSP1A8MZH6 123 aa6.33□□□□□ -1.4
RSF1-201ENST00000308488 FUSP35637 526 aaKnown RBP eCLIP6.33□□□□□ -1.42e-6■■■□□ 19.1
RSF1-201ENST00000308488 CGB1A6NKQ9 187 aa6.33□□□□□ -1.4
RSF1-201ENST00000308488 NDUFA11Q86Y39 141 aa6.33□□□□□ -1.4
RSF1-201ENST00000308488 NDUFA12Q9UI09 145 aa6.33□□□□□ -1.4
RSF1-201ENST00000308488 M0R1W7 72 aa6.32□□□□□ -1.4
RSF1-201ENST00000308488 RNF138Q8WVD3 245 aa6.32□□□□□ -1.4
RSF1-201ENST00000308488 TRPT1Q86TN4 253 aaKnown RBP6.32□□□□□ -1.4
RSF1-201ENST00000308488 H0Y8X5 98 aa6.32□□□□□ -1.4
RSF1-201ENST00000308488 IGKV1-12A0A0C4DH73 117 aa6.32□□□□□ -1.4
RSF1-201ENST00000308488 IGKV1D-12P01611 117 aa6.32□□□□□ -1.4
RSF1-201ENST00000308488 SLC25A29Q8N8R3 303 aa6.32□□□□□ -1.4
RSF1-201ENST00000308488 TRAV12-1A0A0B4J245 112 aa6.32□□□□□ -1.4
RSF1-201ENST00000308488 J3QLI3 93 aa6.32□□□□□ -1.4
RSF1-201ENST00000308488 P0DMU3 169 aa6.32□□□□□ -1.4
RSF1-201ENST00000308488 FAM231AP0DMU4 169 aa6.32□□□□□ -1.4
RSF1-201ENST00000308488 FAM231CP0DMU5 169 aa6.32□□□□□ -1.4
RSF1-201ENST00000308488 LMO7DNF2Z398 122 aa6.32□□□□□ -1.4
RSF1-201ENST00000308488 SIGLEC15Q6ZMC9 328 aa6.32□□□□□ -1.4
RSF1-201ENST00000308488 PKD1L2Q7Z442 2459 aa6.32□□□□□ -1.4
RSF1-201ENST00000308488 SAA2P0DJI9 122 aaPredicted RBP6.32□□□□□ -1.4
RSF1-201ENST00000308488 FGFBP3Q8TAT2 258 aa6.32□□□□□ -1.4
RSF1-201ENST00000308488 C16orf47Q6ZP98 133 aaPredicted RBP6.32□□□□□ -1.4
RSF1-201ENST00000308488 C2orf91Q6ZV80 131 aa6.32□□□□□ -1.4
RSF1-201ENST00000308488 NTN3O00634 580 aaPredicted RBP6.31□□□□□ -1.4
RSF1-201ENST00000308488 RPL35AP18077 110 aaKnown RBP6.31□□□□□ -1.4
RSF1-201ENST00000308488 TEX49A0A1B0GTD5 131 aa6.31□□□□□ -1.4
RSF1-201ENST00000308488 RNF186Q9NXI6 227 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms