RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.17□□□□□ -1.74
VPS50-202ENST00000305866 RAB9AP51151 201 aa4.17□□□□□ -1.74
VPS50-202ENST00000305866 UCNP55089 124 aa4.17□□□□□ -1.74
VPS50-202ENST00000305866 TEX48A0A1B0GUV7 120 aa4.16□□□□□ -1.74
VPS50-202ENST00000305866 CRYGDP07320 174 aa4.16□□□□□ -1.74
VPS50-202ENST00000305866 PRB4P10163 310 aaPredicted RBP4.16□□□□□ -1.74
VPS50-202ENST00000305866 HTR1DP28221 377 aa4.16□□□□□ -1.74
VPS50-202ENST00000305866 RIPPLY3P57055 190 aa4.16□□□□□ -1.74
VPS50-202ENST00000305866 FXYD7P58549 80 aa4.16□□□□□ -1.74
VPS50-202ENST00000305866 VHLLQ6RSH7 139 aa4.16□□□□□ -1.74
VPS50-202ENST00000305866 GOLT1AQ6ZVE7 132 aa4.16□□□□□ -1.74
VPS50-202ENST00000305866 NFE4Q86UQ8 179 aa4.16□□□□□ -1.74
VPS50-202ENST00000305866 BPIFA4PQ86YQ2 179 aa4.16□□□□□ -1.74
VPS50-202ENST00000305866 GPHB5Q86YW7 130 aa4.16□□□□□ -1.74
VPS50-202ENST00000305866 FAM110DQ8TAY7 271 aaPredicted RBP4.16□□□□□ -1.74
VPS50-202ENST00000305866 BLNKQ8WV28 456 aa4.16□□□□□ -1.74
VPS50-202ENST00000305866 PRR25Q96S07 402 aa4.16□□□□□ -1.74
VPS50-202ENST00000305866 AP5S1Q9NUS5 200 aa4.16□□□□□ -1.74
VPS50-202ENST00000305866 TRIOBPQ9H2D6 2365 aa4.16□□□□□ -1.74
VPS50-202ENST00000305866 TRBV25-1A0A075B6N4 114 aa4.16□□□□□ -1.74
VPS50-202ENST00000305866 M0R3E3 92 aa4.16□□□□□ -1.74
VPS50-202ENST00000305866 TSHBP01222 138 aa4.16□□□□□ -1.74
VPS50-202ENST00000305866 INSL3P51460 131 aa4.16□□□□□ -1.74
VPS50-202ENST00000305866 DYNAPQ8N1N2 210 aa4.16□□□□□ -1.74
VPS50-202ENST00000305866 DEFB108BQ8NET1 73 aa4.16□□□□□ -1.74
VPS50-202ENST00000305866 ZNF502Q8TBZ5 544 aa4.16□□□□□ -1.74
VPS50-202ENST00000305866 RNF125Q96EQ8 232 aa4.16□□□□□ -1.74
VPS50-202ENST00000305866 LENEPQ9Y5L5 61 aa4.16□□□□□ -1.74
VPS50-202ENST00000305866 NACAE9PAV3 2078 aa4.16□□□□□ -1.74
VPS50-202ENST00000305866 NDUFS8O00217 210 aa4.16□□□□□ -1.74
VPS50-202ENST00000305866 CTSGP08311 255 aa4.16□□□□□ -1.74
VPS50-202ENST00000305866 MED14OSP0DP75 135 aa4.16□□□□□ -1.74
VPS50-202ENST00000305866 S100A7P31151 101 aa4.16□□□□□ -1.74
VPS50-202ENST00000305866 LINC00315P59091 139 aa4.16□□□□□ -1.74
VPS50-202ENST00000305866 OR4X2Q8NGF9 303 aa4.16□□□□□ -1.74
VPS50-202ENST00000305866 VGLL1Q99990 258 aa4.16□□□□□ -1.74
VPS50-202ENST00000305866 SMKR1H3BMG3 65 aa4.15□□□□□ -1.74
VPS50-202ENST00000305866 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.15□□□□□ -1.74
VPS50-202ENST00000305866 UBE2D1P51668 147 aa4.15□□□□□ -1.74
VPS50-202ENST00000305866 CACNG7P62955 275 aa4.15□□□□□ -1.74
VPS50-202ENST00000305866 Q8N9W7 124 aa4.15□□□□□ -1.74
VPS50-202ENST00000305866 OR10AG1Q8NH19 301 aa4.15□□□□□ -1.74
VPS50-202ENST00000305866 TMEM158Q8WZ71 300 aa4.15□□□□□ -1.74
VPS50-202ENST00000305866 CARD19Q96LW7 228 aa4.15□□□□□ -1.74
VPS50-202ENST00000305866 NAA38Q9BRA0 125 aaKnown RBP4.15□□□□□ -1.74
VPS50-202ENST00000305866 A0A1W2PRD5 423 aa4.15□□□□□ -1.75
VPS50-202ENST00000305866 A0A1W2PRF3 423 aa4.15□□□□□ -1.75
VPS50-202ENST00000305866 A0A1W2PRM7 423 aa4.15□□□□□ -1.75
VPS50-202ENST00000305866 IGLL5B9A064 214 aa4.15□□□□□ -1.75
VPS50-202ENST00000305866 PRAC2D3DTV9 90 aa4.15□□□□□ -1.75
VPS50-202ENST00000305866 H3BUA1 57 aa4.15□□□□□ -1.75
VPS50-202ENST00000305866 H3BUT2 72 aa4.15□□□□□ -1.75
VPS50-202ENST00000305866 K7ERJ3 54 aa4.15□□□□□ -1.75
VPS50-202ENST00000305866 NXPH4O95158 308 aa4.15□□□□□ -1.75
VPS50-202ENST00000305866 CD7P09564 240 aa4.15□□□□□ -1.75
VPS50-202ENST00000305866 ORM2P19652 201 aa4.15□□□□□ -1.75
VPS50-202ENST00000305866 UBE2D3P61077 147 aa4.15□□□□□ -1.75
VPS50-202ENST00000305866 UBE2D2P62837 147 aa4.15□□□□□ -1.75
VPS50-202ENST00000305866 RIGQ13278 110 aa4.15□□□□□ -1.75
VPS50-202ENST00000305866 VAMP3Q15836 100 aa4.15□□□□□ -1.75
VPS50-202ENST00000305866 PRR9Q5T870 116 aa4.15□□□□□ -1.75
VPS50-202ENST00000305866 CLEC2AQ6UVW9 174 aa4.15□□□□□ -1.75
VPS50-202ENST00000305866 CEND1Q8N111 149 aa4.15□□□□□ -1.75
VPS50-202ENST00000305866 ITLN2Q8WWU7 325 aaPredicted RBP4.15□□□□□ -1.75
VPS50-202ENST00000305866 CCL17Q92583 94 aa4.15□□□□□ -1.75
VPS50-202ENST00000305866 SPAG8Q99932 426 aaPredicted RBP4.15□□□□□ -1.75
VPS50-202ENST00000305866 RASL11BQ9BPW5 248 aa4.15□□□□□ -1.75
VPS50-202ENST00000305866 IGHV7-81A0A0B4J1V7 117 aa4.15□□□□□ -1.75
VPS50-202ENST00000305866 K7EMI3 77 aa4.15□□□□□ -1.75
VPS50-202ENST00000305866 SOCS3O14543 225 aa4.15□□□□□ -1.75
VPS50-202ENST00000305866 TIMM23O14925 209 aa4.15□□□□□ -1.75
VPS50-202ENST00000305866 HBDP02042 147 aa4.15□□□□□ -1.75
VPS50-202ENST00000305866 GATA1P15976 413 aaPredicted RBP4.15□□□□□ -1.75
VPS50-202ENST00000305866 HLA-DMBP28068 263 aa4.15□□□□□ -1.75
VPS50-202ENST00000305866 UBE2E1P51965 193 aa4.15□□□□□ -1.75
VPS50-202ENST00000305866 RPL32P62910 135 aaKnown RBP4.15□□□□□ -1.75
VPS50-202ENST00000305866 PRNTQ86SH4 94 aa4.15□□□□□ -1.75
VPS50-202ENST00000305866 ITPR1Q14643 2758 aa4.15□□□□□ -1.75
VPS50-202ENST00000305866 TRGV3P03979 118 aa4.14□□□□□ -1.75
VPS50-202ENST00000305866 FCER1GP30273 86 aa4.14□□□□□ -1.75
VPS50-202ENST00000305866 MFAP4P55083 255 aa4.14□□□□□ -1.75
VPS50-202ENST00000305866 C9orf47Q6ZRZ4 202 aa4.14□□□□□ -1.75
VPS50-202ENST00000305866 OR2K2Q8NGT1 345 aa4.14□□□□□ -1.75
VPS50-202ENST00000305866 HILPDAQ9Y5L2 63 aa4.14□□□□□ -1.75
VPS50-202ENST00000305866 KIF25-AS1Q9Y6Z4 181 aa4.14□□□□□ -1.75
VPS50-202ENST00000305866 ANKRD11Q6UB99 2663 aaPredicted RBP4.14□□□□□ -1.75
VPS50-202ENST00000305866 WFDC2Q14508 124 aa4.14□□□□□ -1.75
VPS50-202ENST00000305866 CFAP126Q5VTH2 177 aa4.14□□□□□ -1.75
VPS50-202ENST00000305866 IFI27L1Q96BM0 104 aa4.14□□□□□ -1.75
VPS50-202ENST00000305866 IGLV4-69A0A075B6H9 119 aa4.14□□□□□ -1.75
VPS50-202ENST00000305866 TMEM238LA0A1B0GVL6 79 aa4.14□□□□□ -1.75
VPS50-202ENST00000305866 ZNF207O43670 478 aaKnown RBP4.14□□□□□ -1.75
VPS50-202ENST00000305866 NEXN-AS1Q8NBZ9 246 aa4.14□□□□□ -1.75
VPS50-202ENST00000305866 FBXL15Q9H469 300 aa4.14□□□□□ -1.75
VPS50-202ENST00000305866 SELENOKQ9Y6D0 94 aa4.14□□□□□ -1.75
VPS50-202ENST00000305866 IGHV3-21A0A0B4J1V1 117 aa4.13□□□□□ -1.75
VPS50-202ENST00000305866 BUB3O43684 328 aa4.13□□□□□ -1.75
VPS50-202ENST00000305866 TOX4O94842 621 aa4.13□□□□□ -1.75
VPS50-202ENST00000305866 IGF1P05019 195 aa4.13□□□□□ -1.75
VPS50-202ENST00000305866 RPL7P18124 248 aaKnown RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms