RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 PRSS57Q6UWY2 283 aa18.93■□□□□ 0.62
SPTSSA-201ENST00000298130 NAA38Q9BRA0 125 aaKnown RBP18.93■□□□□ 0.62
SPTSSA-201ENST00000298130 G3V318 75 aa18.93■□□□□ 0.62
SPTSSA-201ENST00000298130 CLEC3BP05452 202 aa18.93■□□□□ 0.62
SPTSSA-201ENST00000298130 Q6AWC8 147 aa18.93■□□□□ 0.62
SPTSSA-201ENST00000298130 GATD1Q8NB37 220 aa18.93■□□□□ 0.62
SPTSSA-201ENST00000298130 Q6ZQT7 251 aa18.92■□□□□ 0.62
SPTSSA-201ENST00000298130 THYN1Q9P016 225 aa18.92■□□□□ 0.62
SPTSSA-201ENST00000298130 M0R1W7 72 aa18.92■□□□□ 0.62
SPTSSA-201ENST00000298130 COX8AP10176 69 aa18.92■□□□□ 0.62
SPTSSA-201ENST00000298130 RNF151Q2KHN1 245 aa18.92■□□□□ 0.62
SPTSSA-201ENST00000298130 DEFB125Q8N687 156 aa18.92■□□□□ 0.62
SPTSSA-201ENST00000298130 MSRB2Q9Y3D2 182 aa18.92■□□□□ 0.62
SPTSSA-201ENST00000298130 CBY1Q9Y3M2 126 aa18.91■□□□□ 0.62
SPTSSA-201ENST00000298130 A0A1B0GW15 77 aa18.91■□□□□ 0.62
SPTSSA-201ENST00000298130 C12orf54Q6X4T0 127 aa18.91■□□□□ 0.62
SPTSSA-201ENST00000298130 MS4A6AQ9H2W1 248 aa18.91■□□□□ 0.62
SPTSSA-201ENST00000298130 HIVEP3Q5T1R4 2406 aa18.91■□□□□ 0.62
SPTSSA-201ENST00000298130 PCP4P48539 62 aa18.9■□□□□ 0.62
SPTSSA-201ENST00000298130 HIST1H1AQ02539 215 aaPredicted RBP18.9■□□□□ 0.62
SPTSSA-201ENST00000298130 SAPCD1Q5SSQ6 148 aa18.9■□□□□ 0.62
SPTSSA-201ENST00000298130 IL17RELQ6ZVW7 336 aa18.9■□□□□ 0.62
SPTSSA-201ENST00000298130 Q8N9W7 124 aa18.9■□□□□ 0.62
SPTSSA-201ENST00000298130 RAXQ9Y2V3 346 aa18.9■□□□□ 0.62
SPTSSA-201ENST00000298130 DKK2Q9UBU2 259 aa18.89■□□□□ 0.62
SPTSSA-201ENST00000298130 LINC00527Q9UJ94 153 aa18.89■□□□□ 0.62
SPTSSA-201ENST00000298130 TRAV8-6A0A0B4J262 113 aa18.89■□□□□ 0.61
SPTSSA-201ENST00000298130 CLEC19AQ6UXS0 136 aa18.89■□□□□ 0.61
SPTSSA-201ENST00000298130 Q8N6K4 173 aa18.89■□□□□ 0.61
SPTSSA-201ENST00000298130 ATP6V0E1O15342 81 aa18.88■□□□□ 0.61
SPTSSA-201ENST00000298130 C11orf71Q6IPW1 123 aa18.88■□□□□ 0.61
SPTSSA-201ENST00000298130 U3KQK5 164 aa18.88■□□□□ 0.61
SPTSSA-201ENST00000298130 RBX1P62877 108 aa18.87■□□□□ 0.61
SPTSSA-201ENST00000298130 IGHV3OR16-10A0A075B7F0 116 aa18.87■□□□□ 0.61
SPTSSA-201ENST00000298130 NMUP48645 174 aa18.87■□□□□ 0.61
SPTSSA-201ENST00000298130 FBXL19-AS1Q494R0 122 aa18.87■□□□□ 0.61
SPTSSA-201ENST00000298130 CCDC144NLQ6NUI1 221 aa18.87■□□□□ 0.61
SPTSSA-201ENST00000298130 PPP1R14DQ9NXH3 145 aa18.87■□□□□ 0.61
SPTSSA-201ENST00000298130 HBDP02042 147 aa18.87■□□□□ 0.61
SPTSSA-201ENST00000298130 S100A7AQ86SG5 101 aa18.87■□□□□ 0.61
SPTSSA-201ENST00000298130 PCP2Q8IVA1 136 aa18.87■□□□□ 0.61
SPTSSA-201ENST00000298130 TTTY13Q9BZ97 58 aa18.86■□□□□ 0.61
SPTSSA-201ENST00000298130 FGF6P10767 208 aa18.86■□□□□ 0.61
SPTSSA-201ENST00000298130 TM4SF20Q53R12 229 aa18.86■□□□□ 0.61
SPTSSA-201ENST00000298130 IFI27L1Q96BM0 104 aa18.86■□□□□ 0.61
SPTSSA-201ENST00000298130 IGLC6P0CF74 106 aa18.85■□□□□ 0.61
SPTSSA-201ENST00000298130 RNF185Q96GF1 192 aa18.85■□□□□ 0.61
SPTSSA-201ENST00000298130 J3KRW8 73 aa18.84■□□□□ 0.61
SPTSSA-201ENST00000298130 SPRY2O43597 315 aa18.84■□□□□ 0.61
SPTSSA-201ENST00000298130 ZNF48Q96MX3 618 aaPredicted RBP18.84■□□□□ 0.61
SPTSSA-201ENST00000298130 BMI1P35226 326 aa18.84■□□□□ 0.61
SPTSSA-201ENST00000298130 C11orf21Q9P2W6 132 aa18.84■□□□□ 0.61
SPTSSA-201ENST00000298130 C7orf71A4D174 169 aa18.83■□□□□ 0.61
SPTSSA-201ENST00000298130 PAX8Q06710 450 aa18.83■□□□□ 0.61
SPTSSA-201ENST00000298130 TMEM97Q5BJF2 176 aa18.83■□□□□ 0.61
SPTSSA-201ENST00000298130 TMEM219Q86XT9 240 aa18.83■□□□□ 0.6
SPTSSA-201ENST00000298130 TRAV26-2A0A0B4J265 109 aa18.82■□□□□ 0.6
SPTSSA-201ENST00000298130 BUB3O43684 328 aa18.82■□□□□ 0.6
SPTSSA-201ENST00000298130 SAA4P35542 130 aa18.82■□□□□ 0.6
SPTSSA-201ENST00000298130 ZNF502Q8TBZ5 544 aa18.82■□□□□ 0.6
SPTSSA-201ENST00000298130 FABP5P3A8MUU1 101 aa18.81■□□□□ 0.6
SPTSSA-201ENST00000298130 TRGV3P03979 118 aa18.81■□□□□ 0.6
SPTSSA-201ENST00000298130 LEPP41159 167 aa18.81■□□□□ 0.6
SPTSSA-201ENST00000298130 RAB37Q96AX2 223 aa18.81■□□□□ 0.6
SPTSSA-201ENST00000298130 UBTD1Q9HAC8 227 aa18.81■□□□□ 0.6
SPTSSA-201ENST00000298130 CD5LO43866 347 aa18.81■□□□□ 0.6
SPTSSA-201ENST00000298130 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa18.81■□□□□ 0.6
SPTSSA-201ENST00000298130 CCDC140Q96MF4 163 aa18.81■□□□□ 0.6
SPTSSA-201ENST00000298130 ZFAND3Q9H8U3 227 aa18.81■□□□□ 0.6
SPTSSA-201ENST00000298130 SIRPDQ9H106 197 aa18.81■□□□□ 0.6
SPTSSA-201ENST00000298130 IGKV3D-20A0A0C4DH25 116 aa18.8■□□□□ 0.6
SPTSSA-201ENST00000298130 AGPAT4-IT1Q9H0P7 198 aa18.8■□□□□ 0.6
SPTSSA-201ENST00000298130 SPG11Q96JI7 2443 aa18.8■□□□□ 0.6
SPTSSA-201ENST00000298130 CLPSL1A2RUU4 121 aa18.8■□□□□ 0.6
SPTSSA-201ENST00000298130 LGALS9BQ3B8N2 356 aa18.8■□□□□ 0.6
SPTSSA-201ENST00000298130 LGALS9CQ6DKI2 356 aa18.8■□□□□ 0.6
SPTSSA-201ENST00000298130 AJUBAQ96IF1 538 aa18.79■□□□□ 0.6
SPTSSA-201ENST00000298130 DEFB1P60022 68 aa18.79■□□□□ 0.6
SPTSSA-201ENST00000298130 EBI3Q14213 229 aa18.79■□□□□ 0.6
SPTSSA-201ENST00000298130 K7EP13 123 aa18.78■□□□□ 0.6
SPTSSA-201ENST00000298130 TNFRSF6BO95407 300 aa18.78■□□□□ 0.6
SPTSSA-201ENST00000298130 PSMG3-AS1Q96PY0 264 aa18.77■□□□□ 0.6
SPTSSA-201ENST00000298130 MAP1LC3AQ9H492 121 aa18.77■□□□□ 0.6
SPTSSA-201ENST00000298130 MINOS1Q5TGZ0 78 aa18.77■□□□□ 0.6
SPTSSA-201ENST00000298130 COX8CQ7Z4L0 72 aa18.77■□□□□ 0.6
SPTSSA-201ENST00000298130 DTX2Q86UW9 622 aa18.77■□□□□ 0.6
SPTSSA-201ENST00000298130 UFC1Q9Y3C8 167 aa18.77■□□□□ 0.6
SPTSSA-201ENST00000298130 MINOS1-NBL1R4GNA1 71 aa18.77■□□□□ 0.6
SPTSSA-201ENST00000298130 IGKV2D-26A0A0A0MRZ7 120 aa18.76■□□□□ 0.59
SPTSSA-201ENST00000298130 RPS20P60866 119 aaKnown RBP18.76■□□□□ 0.59
SPTSSA-201ENST00000298130 FAM110DQ8TAY7 271 aaPredicted RBP18.76■□□□□ 0.59
SPTSSA-201ENST00000298130 BPESC1Q9GZL8 116 aa18.76■□□□□ 0.59
SPTSSA-201ENST00000298130 IGF1P05019 195 aa18.76■□□□□ 0.59
SPTSSA-201ENST00000298130 BOD1L2Q8IYS8 172 aa18.76■□□□□ 0.59
SPTSSA-201ENST00000298130 SMAD7O15105 426 aaKnown RBP18.76■□□□□ 0.59
SPTSSA-201ENST00000298130 SCGB2A1O75556 95 aa18.76■□□□□ 0.59
SPTSSA-201ENST00000298130 PRSS1P07477 247 aa18.76■□□□□ 0.59
SPTSSA-201ENST00000298130 CST9LQ9H4G1 147 aa18.76■□□□□ 0.59
SPTSSA-201ENST00000298130 TRAV8-2A0A0B4J237 113 aa18.75■□□□□ 0.59
SPTSSA-201ENST00000298130 GOSR1O95249 250 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms