RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 HNRNPA3P51991 378 aaKnown RBP14.14□□□□□ -0.15
SHKBP1-201ENST00000291842 KLK9Q2XQG4 91 aa14.14□□□□□ -0.15
SHKBP1-201ENST00000291842 IL17RELQ6ZVW7 336 aa14.14□□□□□ -0.15
SHKBP1-201ENST00000291842 COX8CQ7Z4L0 72 aa14.14□□□□□ -0.15
SHKBP1-201ENST00000291842 KLK9Q9UKQ9 250 aa14.14□□□□□ -0.15
SHKBP1-201ENST00000291842 USP9XQ93008 2570 aaPredicted RBP14.13□□□□□ -0.15
SHKBP1-201ENST00000291842 RPLP1P05386 114 aaKnown RBP14.13□□□□□ -0.15
SHKBP1-201ENST00000291842 IFI27P40305 119 aaPredicted RBP14.13□□□□□ -0.15
SHKBP1-201ENST00000291842 TFPI2P48307 235 aa14.13□□□□□ -0.15
SHKBP1-201ENST00000291842 TWIST1Q15672 202 aa14.13□□□□□ -0.15
SHKBP1-201ENST00000291842 ZNF493Q6ZR52 646 aa14.13□□□□□ -0.15
SHKBP1-201ENST00000291842 FER1L6-AS1Q8NA97 138 aa14.13□□□□□ -0.15
SHKBP1-201ENST00000291842 IGHV4-30-2A0A087WSY4 118 aa14.12□□□□□ -0.15
SHKBP1-201ENST00000291842 TRGV3P03979 118 aa14.12□□□□□ -0.15
SHKBP1-201ENST00000291842 BMI1P35226 326 aa14.12□□□□□ -0.15
SHKBP1-201ENST00000291842 ATP5J2P56134 94 aa14.12□□□□□ -0.15
SHKBP1-201ENST00000291842 C10orf105Q8TEF2 133 aa14.12□□□□□ -0.15
SHKBP1-201ENST00000291842 METTL26Q96S19 204 aa14.12□□□□□ -0.15
SHKBP1-201ENST00000291842 PMCHL2Q9BQD1 86 aa14.12□□□□□ -0.15
SHKBP1-201ENST00000291842 AP5S1Q9NUS5 200 aa14.12□□□□□ -0.15
SHKBP1-201ENST00000291842 MSRB1Q9NZV6 116 aa14.12□□□□□ -0.15
SHKBP1-201ENST00000291842 CACNA1AO00555 2505 aa14.12□□□□□ -0.15
SHKBP1-201ENST00000291842 SMKR1H3BMG3 65 aa14.12□□□□□ -0.15
SHKBP1-201ENST00000291842 PPIFP30405 207 aaKnown RBP14.12□□□□□ -0.15
SHKBP1-201ENST00000291842 ARL6IP6Q8N6S5 226 aa14.12□□□□□ -0.15
SHKBP1-201ENST00000291842 A0A087X0K7 114 aa14.11□□□□□ -0.15
SHKBP1-201ENST00000291842 hDV102S1A0JD36 115 aa14.11□□□□□ -0.15
SHKBP1-201ENST00000291842 CRXO43186 299 aaPredicted RBP14.11□□□□□ -0.15
SHKBP1-201ENST00000291842 LOXL1Q08397 574 aaPredicted RBP14.11□□□□□ -0.15
SHKBP1-201ENST00000291842 FAM104BQ5XKR9 115 aa14.11□□□□□ -0.15
SHKBP1-201ENST00000291842 FA2HQ7L5A8 372 aa14.11□□□□□ -0.15
SHKBP1-201ENST00000291842 TRBV12-3P01733 135 aa14.11□□□□□ -0.15
SHKBP1-201ENST00000291842 OR5AL1P0C617 328 aa14.11□□□□□ -0.15
SHKBP1-201ENST00000291842 RAB9AP51151 201 aa14.11□□□□□ -0.15
SHKBP1-201ENST00000291842 FXYD7P58549 80 aa14.11□□□□□ -0.15
SHKBP1-201ENST00000291842 TRAV8-2A0A0B4J237 113 aa14.1□□□□□ -0.15
SHKBP1-201ENST00000291842 MRPL51Q4U2R6 128 aaKnown RBP14.1□□□□□ -0.15
SHKBP1-201ENST00000291842 MRPL52Q86TS9 123 aaKnown RBP14.1□□□□□ -0.15
SHKBP1-201ENST00000291842 PRELID3AQ96N28 172 aa14.1□□□□□ -0.15
SHKBP1-201ENST00000291842 MAP1LC3CQ9BXW4 147 aa14.1□□□□□ -0.15
SHKBP1-201ENST00000291842 AGPAT4-IT1Q9H0P7 198 aa14.1□□□□□ -0.15
SHKBP1-201ENST00000291842 FABP5P3A8MUU1 101 aa14.1□□□□□ -0.15
SHKBP1-201ENST00000291842 ZNF25P17030 456 aaPredicted RBP14.1□□□□□ -0.15
SHKBP1-201ENST00000291842 CLEC2AQ6UVW9 174 aa14.1□□□□□ -0.15
SHKBP1-201ENST00000291842 C8orf86Q6ZUL3 223 aa14.1□□□□□ -0.15
SHKBP1-201ENST00000291842 NRGNQ92686 78 aa14.1□□□□□ -0.15
SHKBP1-201ENST00000291842 FBLL1A6NHQ2 334 aaKnown RBP14.09□□□□□ -0.15
SHKBP1-201ENST00000291842 H3BUX3 64 aa14.09□□□□□ -0.15
SHKBP1-201ENST00000291842 NCR2O95944 276 aa14.09□□□□□ -0.15
SHKBP1-201ENST00000291842 TSPOP30536 169 aa14.09□□□□□ -0.15
SHKBP1-201ENST00000291842 SIGLEC8Q9NYZ4 499 aa14.09□□□□□ -0.15
SHKBP1-201ENST00000291842 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.09□□□□□ -0.153e-7■■□□□ 13.4
SHKBP1-201ENST00000291842 IGLC6P0CF74 106 aa14.09□□□□□ -0.15
SHKBP1-201ENST00000291842 C19orf54Q5BKX5 351 aa14.09□□□□□ -0.15
SHKBP1-201ENST00000291842 Q6ZQT7 251 aa14.09□□□□□ -0.15
SHKBP1-201ENST00000291842 SLC50A1Q9BRV3 221 aa14.09□□□□□ -0.15
SHKBP1-201ENST00000291842 LAMTOR2Q9Y2Q5 125 aa14.09□□□□□ -0.15
SHKBP1-201ENST00000291842 IGHV3-11P01762 117 aa14.08□□□□□ -0.16
SHKBP1-201ENST00000291842 ARL3P36405 182 aa14.08□□□□□ -0.16
SHKBP1-201ENST00000291842 UNQ9165/PRO28630Q6UXU0 137 aa14.08□□□□□ -0.16
SHKBP1-201ENST00000291842 Q6ZS46 218 aa14.08□□□□□ -0.16
SHKBP1-201ENST00000291842 LCNL1Q6ZST4 164 aa14.08□□□□□ -0.16
SHKBP1-201ENST00000291842 ORMDL3Q8N138 153 aa14.08□□□□□ -0.16
SHKBP1-201ENST00000291842 HSPB8Q9UJY1 196 aa14.08□□□□□ -0.16
SHKBP1-201ENST00000291842 DOPEY1Q5JWR5 2465 aa14.08□□□□□ -0.16
SHKBP1-201ENST00000291842 RPS20P60866 119 aaKnown RBP14.08□□□□□ -0.16
SHKBP1-201ENST00000291842 BLCAPP62952 87 aa14.08□□□□□ -0.16
SHKBP1-201ENST00000291842 C20orf202A1L168 122 aa14.07□□□□□ -0.16
SHKBP1-201ENST00000291842 CKS2P33552 79 aa14.07□□□□□ -0.16
SHKBP1-201ENST00000291842 STPG4Q8N801 248 aa14.07□□□□□ -0.16
SHKBP1-201ENST00000291842 MEGF9Q9H1U4 602 aa14.07□□□□□ -0.16
SHKBP1-201ENST00000291842 SELENOKQ9Y6D0 94 aa14.07□□□□□ -0.16
SHKBP1-201ENST00000291842 MYO18BQ8IUG5 2567 aa14.07□□□□□ -0.16
SHKBP1-201ENST00000291842 ACACBO00763 2458 aa14.07□□□□□ -0.16
SHKBP1-201ENST00000291842 HINT1P49773 126 aaPredicted RBP14.07□□□□□ -0.16
SHKBP1-201ENST00000291842 U3KQK5 164 aa14.07□□□□□ -0.16
SHKBP1-201ENST00000291842 GAS8-AS1O95177 125 aa14.06□□□□□ -0.16
SHKBP1-201ENST00000291842 OR10AG1Q8NH19 301 aa14.06□□□□□ -0.16
SHKBP1-201ENST00000291842 PSMG3-AS1Q96PY0 264 aa14.06□□□□□ -0.16
SHKBP1-201ENST00000291842 TMEM191AQ9H0A3 160 aa14.06□□□□□ -0.16
SHKBP1-201ENST00000291842 KLK15Q9H2R5 256 aa14.06□□□□□ -0.16
SHKBP1-201ENST00000291842 C11orf21Q9P2W6 132 aa14.06□□□□□ -0.16
SHKBP1-201ENST00000291842 U3KQE9 123 aa14.06□□□□□ -0.16
SHKBP1-201ENST00000291842 A0A096LNJ9 63 aa14.05□□□□□ -0.16
SHKBP1-201ENST00000291842 FAM223BA6NKX1 122 aa14.05□□□□□ -0.16
SHKBP1-201ENST00000291842 SMAD7O15105 426 aaKnown RBP14.05□□□□□ -0.16
SHKBP1-201ENST00000291842 NPYP01303 97 aa14.05□□□□□ -0.16
SHKBP1-201ENST00000291842 TMEM78Q5T7P6 136 aa14.05□□□□□ -0.16
SHKBP1-201ENST00000291842 FAM223AQ8IWN6 122 aa14.05□□□□□ -0.16
SHKBP1-201ENST00000291842 ZNF747Q9BV97 191 aa14.05□□□□□ -0.16
SHKBP1-201ENST00000291842 PET117Q6UWS5 81 aa14.05□□□□□ -0.16
SHKBP1-201ENST00000291842 C16orf92Q96LL3 132 aa14.05□□□□□ -0.16
SHKBP1-201ENST00000291842 CSPG4Q6UVK1 2322 aa14.05□□□□□ -0.16
SHKBP1-201ENST00000291842 IGKV3D-20A0A0C4DH25 116 aa14.04□□□□□ -0.16
SHKBP1-201ENST00000291842 RBAKDNA6NC62 111 aa14.04□□□□□ -0.16
SHKBP1-201ENST00000291842 AVPP01185 164 aa14.04□□□□□ -0.16
SHKBP1-201ENST00000291842 COL5A1-AS1Q5SY13 56 aa14.04□□□□□ -0.16
SHKBP1-201ENST00000291842 PRSS57Q6UWY2 283 aa14.04□□□□□ -0.16
SHKBP1-201ENST00000291842 OR8A1Q8NGG7 326 aa14.04□□□□□ -0.16
SHKBP1-201ENST00000291842 J3KRW8 73 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms