RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 SPOCK3Q9BQ16 436 aa14.76□□□□□ -0.05
PCDH1-201ENST00000287008 CHD8Q9HCK8 2581 aa14.75□□□□□ -0.05
PCDH1-201ENST00000287008 H3BUA1 57 aa14.75□□□□□ -0.05
PCDH1-201ENST00000287008 CDKN1BP46527 198 aa14.75□□□□□ -0.05
PCDH1-201ENST00000287008 TDGF1P3P51864 188 aa14.75□□□□□ -0.05
PCDH1-201ENST00000287008 PAX4O43316 350 aa14.75□□□□□ -0.05
PCDH1-201ENST00000287008 TYMSP04818 313 aa14.75□□□□□ -0.05
PCDH1-201ENST00000287008 CXCL1P09341 107 aa14.75□□□□□ -0.05
PCDH1-201ENST00000287008 C8orf31Q8N9H6 132 aa14.75□□□□□ -0.05
PCDH1-201ENST00000287008 C11orf53Q8IXP5 236 aa14.74□□□□□ -0.05
PCDH1-201ENST00000287008 CST9LQ9H4G1 147 aa14.74□□□□□ -0.05
PCDH1-201ENST00000287008 IGHV1OR15-1A0A075B7D0 117 aa14.74□□□□□ -0.05
PCDH1-201ENST00000287008 Q8NFD4 153 aa14.74□□□□□ -0.05
PCDH1-201ENST00000287008 SS18Q15532 418 aa14.74□□□□□ -0.05
PCDH1-201ENST00000287008 C5orf30Q96GV9 206 aa14.74□□□□□ -0.05
PCDH1-201ENST00000287008 SLC25A2Q9BXI2 301 aa14.74□□□□□ -0.05
PCDH1-201ENST00000287008 TMEM238C9JI98 176 aa14.74□□□□□ -0.05
PCDH1-201ENST00000287008 IGLC1P0CG04 106 aa14.74□□□□□ -0.05
PCDH1-201ENST00000287008 HOXB4P17483 251 aaPredicted RBP14.74□□□□□ -0.05
PCDH1-201ENST00000287008 PAX9P55771 341 aa14.74□□□□□ -0.05
PCDH1-201ENST00000287008 SFTA2Q6UW10 78 aa14.74□□□□□ -0.05
PCDH1-201ENST00000287008 TSSC4Q9Y5U2 329 aaPredicted RBP14.74□□□□□ -0.05
PCDH1-201ENST00000287008 SSBP2P81877 361 aaPredicted RBP14.73□□□□□ -0.05
PCDH1-201ENST00000287008 DAZAP2Q15038 168 aaPredicted RBP14.73□□□□□ -0.05
PCDH1-201ENST00000287008 TRPT1Q86TN4 253 aaKnown RBP14.73□□□□□ -0.05
PCDH1-201ENST00000287008 TMEM75Q8N9X5 138 aa14.73□□□□□ -0.05
PCDH1-201ENST00000287008 PAX2Q02962 417 aa14.73□□□□□ -0.05
PCDH1-201ENST00000287008 LAMTOR2Q9Y2Q5 125 aa14.73□□□□□ -0.05
PCDH1-201ENST00000287008 CENPVL3A0A0U1RRI6 287 aa14.73□□□□□ -0.05
PCDH1-201ENST00000287008 OR11H6Q8NGC7 330 aa14.73□□□□□ -0.05
PCDH1-201ENST00000287008 KLK9Q9UKQ9 250 aa14.73□□□□□ -0.05
PCDH1-201ENST00000287008 SPCS1Q9Y6A9 102 aa14.73□□□□□ -0.05
PCDH1-201ENST00000287008 IGHV7-4-1A0A0J9YVY3 117 aa14.73□□□□□ -0.05
PCDH1-201ENST00000287008 GAGE12JA6NER3 117 aa14.72□□□□□ -0.05
PCDH1-201ENST00000287008 CFHR3Q02985 330 aa14.72□□□□□ -0.05
PCDH1-201ENST00000287008 GAGE1Q13065 139 aa14.72□□□□□ -0.05
PCDH1-201ENST00000287008 GAGE4Q13068 117 aa14.72□□□□□ -0.05
PCDH1-201ENST00000287008 GAGE5Q13069 117 aa14.72□□□□□ -0.05
PCDH1-201ENST00000287008 GAGE13Q4V321 117 aa14.72□□□□□ -0.05
PCDH1-201ENST00000287008 OR2K2Q8NGT1 345 aa14.72□□□□□ -0.05
PCDH1-201ENST00000287008 C10orf105Q8TEF2 133 aa14.72□□□□□ -0.05
PCDH1-201ENST00000287008 DMRTA1Q5VZB9 504 aa14.72□□□□□ -0.05
PCDH1-201ENST00000287008 TMEM158Q8WZ71 300 aa14.72□□□□□ -0.05
PCDH1-201ENST00000287008 A8MWV9 139 aa14.72□□□□□ -0.05
PCDH1-201ENST00000287008 PRO3102Q9H379 93 aa14.72□□□□□ -0.05
PCDH1-201ENST00000287008 GAGE12BA1L429 117 aa14.72□□□□□ -0.05
PCDH1-201ENST00000287008 GAGE7O76087 117 aa14.72□□□□□ -0.05
PCDH1-201ENST00000287008 GAGE12FP0CL80 117 aa14.72□□□□□ -0.05
PCDH1-201ENST00000287008 GAGE12GP0CL81 117 aa14.72□□□□□ -0.05
PCDH1-201ENST00000287008 GAGE12IP0CL82 117 aa14.72□□□□□ -0.05
PCDH1-201ENST00000287008 LY6G5BQ8NDX9 201 aa14.72□□□□□ -0.05
PCDH1-201ENST00000287008 SMKR1H3BMG3 65 aa14.71□□□□□ -0.06
PCDH1-201ENST00000287008 H3BRN7 92 aa14.7□□□□□ -0.06
PCDH1-201ENST00000287008 GFRA4Q9GZZ7 299 aa14.7□□□□□ -0.06
PCDH1-201ENST00000287008 ZNF492Q9P255 531 aa14.7□□□□□ -0.06
PCDH1-201ENST00000287008 MYLKQ15746 1914 aa14.7□□□□□ -0.06
PCDH1-201ENST00000287008 HIST1H2BLQ99880 126 aa14.7□□□□□ -0.06
PCDH1-201ENST00000287008 A0A1B0GUS0 222 aa14.7□□□□□ -0.06
PCDH1-201ENST00000287008 AZU1P20160 251 aa14.7□□□□□ -0.06
PCDH1-201ENST00000287008 TTC32Q5I0X7 151 aa14.7□□□□□ -0.06
PCDH1-201ENST00000287008 NRGNQ92686 78 aa14.7□□□□□ -0.06
PCDH1-201ENST00000287008 PRR25Q96S07 402 aa14.7□□□□□ -0.06
PCDH1-201ENST00000287008 CCL24O00175 119 aa14.69□□□□□ -0.06
PCDH1-201ENST00000287008 FAM231BA6NCW3 169 aa14.69□□□□□ -0.06
PCDH1-201ENST00000287008 IGHV3-16A0A0C4DH30 117 aa14.69□□□□□ -0.06
PCDH1-201ENST00000287008 COLCA2A8K830 154 aa14.69□□□□□ -0.06
PCDH1-201ENST00000287008 GGTLC3B5MD39 225 aa14.69□□□□□ -0.06
PCDH1-201ENST00000287008 LHBP01229 141 aa14.69□□□□□ -0.06
PCDH1-201ENST00000287008 TMEM14CQ9P0S9 112 aa14.69□□□□□ -0.06
PCDH1-201ENST00000287008 TRAV12-2A0A075B6T6 113 aa14.69□□□□□ -0.06
PCDH1-201ENST00000287008 H3BUT2 72 aa14.69□□□□□ -0.06
PCDH1-201ENST00000287008 PRR14LQ5THK1 2151 aa14.68□□□□□ -0.06
PCDH1-201ENST00000287008 IGHV4-38-2P0DP08 117 aa14.68□□□□□ -0.06
PCDH1-201ENST00000287008 HOXD3P31249 432 aaPredicted RBP14.68□□□□□ -0.06
PCDH1-201ENST00000287008 ZMAT4Q9H898 229 aa14.68□□□□□ -0.06
PCDH1-201ENST00000287008 SEM1Q6ZVN7 128 aa14.68□□□□□ -0.06
PCDH1-201ENST00000287008 ATP6V0BQ99437 205 aa14.68□□□□□ -0.06
PCDH1-201ENST00000287008 PRIMA1Q86XR5 153 aa14.68□□□□□ -0.06
PCDH1-201ENST00000287008 TNFRSF6BO95407 300 aa14.68□□□□□ -0.06
PCDH1-201ENST00000287008 M0R2P5 195 aa14.67□□□□□ -0.06
PCDH1-201ENST00000287008 TSPAN13O95857 204 aa14.67□□□□□ -0.06
PCDH1-201ENST00000287008 PLA2G5P39877 138 aa14.67□□□□□ -0.06
PCDH1-201ENST00000287008 JMJD1CQ15652 2540 aa14.67□□□□□ -0.06
PCDH1-201ENST00000287008 ZFYVE26Q68DK2 2539 aa14.67□□□□□ -0.06
PCDH1-201ENST00000287008 TRBV25-1A0A075B6N4 114 aa14.67□□□□□ -0.06
PCDH1-201ENST00000287008 LGALS1P09382 135 aaKnown RBP14.67□□□□□ -0.06
PCDH1-201ENST00000287008 FBXL19-AS1Q494R0 122 aa14.67□□□□□ -0.06
PCDH1-201ENST00000287008 ZNF491Q8N8L2 437 aa14.66□□□□□ -0.06
PCDH1-201ENST00000287008 CT83Q5H943 113 aa14.66□□□□□ -0.06
PCDH1-201ENST00000287008 IGLC7A0M8Q6 106 aa14.66□□□□□ -0.06
PCDH1-201ENST00000287008 ANXA2RQ3ZCQ2 193 aa14.66□□□□□ -0.06
PCDH1-201ENST00000287008 ERG28Q9UKR5 140 aa14.66□□□□□ -0.06
PCDH1-201ENST00000287008 C2CD3Q4AC94 2353 aa14.66□□□□□ -0.06
PCDH1-201ENST00000287008 SPRNQ5BIV9 151 aa14.66□□□□□ -0.06
PCDH1-201ENST00000287008 ORAOV1Q8WV07 137 aa14.66□□□□□ -0.06
PCDH1-201ENST00000287008 TMEM213A2RRL7 107 aa14.65□□□□□ -0.06
PCDH1-201ENST00000287008 ZC2HC1BQ5TFG8 222 aa14.65□□□□□ -0.06
PCDH1-201ENST00000287008 THAP8Q8NA92 274 aa14.65□□□□□ -0.06
PCDH1-201ENST00000287008 C8orf49Q96NF6 230 aa14.65□□□□□ -0.06
PCDH1-201ENST00000287008 MYMXA0A1B0GTQ4 84 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms