RNA–Protein interactions for RNA: ENST00000285679.10

USP25-201, Transcript of ubiquitin specific peptidase 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP25, Length 3,973 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-201ENST00000285679 MLST8Q9BVC4 326 aa12.13□□□□□ -0.47
USP25-201ENST00000285679 CYSLTR1Q9Y271 337 aa12.13□□□□□ -0.47
USP25-201ENST00000285679 IGHV1-3A0A0C4DH29 117 aa12.13□□□□□ -0.47
USP25-201ENST00000285679 TMEM30BQ3MIR4 351 aa12.13□□□□□ -0.47
USP25-201ENST00000285679 ARPC1AQ92747 370 aa12.13□□□□□ -0.47
USP25-201ENST00000285679 MRPL16Q9NX20 251 aaKnown RBP12.13□□□□□ -0.47
USP25-201ENST00000285679 IGKV3-20P01619 116 aa12.13□□□□□ -0.47
USP25-201ENST00000285679 PSMB2P49721 201 aa12.13□□□□□ -0.47
USP25-201ENST00000285679 ERCC8Q13216 396 aa12.13□□□□□ -0.47
USP25-201ENST00000285679 C2orf91Q6ZV80 131 aa12.13□□□□□ -0.47
USP25-201ENST00000285679 VKORC1Q9BQB6 163 aa12.13□□□□□ -0.47
USP25-201ENST00000285679 AGRNO00468 2067 aa12.13□□□□□ -0.47
USP25-201ENST00000285679 PSMB11A5LHX3 300 aa12.12□□□□□ -0.47
USP25-201ENST00000285679 CDX4O14627 284 aaPredicted RBP12.12□□□□□ -0.47
USP25-201ENST00000285679 NDUFS7O75251 213 aa12.12□□□□□ -0.47
USP25-201ENST00000285679 ASCL5Q7RTU5 278 aa12.12□□□□□ -0.47
USP25-201ENST00000285679 PRSS22Q9GZN4 317 aa12.12□□□□□ -0.47
USP25-201ENST00000285679 TRAV26-2A0A0B4J265 109 aa12.12□□□□□ -0.47
USP25-201ENST00000285679 OR11H12B2RN74 326 aa12.12□□□□□ -0.47
USP25-201ENST00000285679 TMEM178BH3BS89 294 aa12.12□□□□□ -0.47
USP25-201ENST00000285679 ADIPOQQ15848 244 aa12.12□□□□□ -0.47
USP25-201ENST00000285679 OR11H1Q8NG94 326 aa12.12□□□□□ -0.47
USP25-201ENST00000285679 OR11H2Q8NH07 326 aa12.12□□□□□ -0.47
USP25-201ENST00000285679 DKK4Q9UBT3 224 aa12.12□□□□□ -0.47
USP25-201ENST00000285679 A0A1B0GV72 72 aa12.12□□□□□ -0.47
USP25-201ENST00000285679 DPM2O94777 84 aa12.12□□□□□ -0.47
USP25-201ENST00000285679 KLRD1Q13241 179 aa12.12□□□□□ -0.47
USP25-201ENST00000285679 KLF12Q9Y4X4 402 aa12.12□□□□□ -0.47
USP25-201ENST00000285679 ADGRG4Q8IZF6 3080 aa12.12□□□□□ -0.47
USP25-201ENST00000285679 A0A1B0GW15 77 aa12.11□□□□□ -0.47
USP25-201ENST00000285679 TMEM8BA6NDV4 472 aa12.11□□□□□ -0.47
USP25-201ENST00000285679 USP9XQ93008 2570 aaPredicted RBP12.11□□□□□ -0.47
USP25-201ENST00000285679 FTH1P19P0C7X4 201 aa12.11□□□□□ -0.47
USP25-201ENST00000285679 C21orf62Q9NYP8 219 aa12.11□□□□□ -0.47
USP25-201ENST00000285679 NPIPB6E9PJ23 425 aa12.11□□□□□ -0.47
USP25-201ENST00000285679 CRXO43186 299 aaPredicted RBP12.11□□□□□ -0.47
USP25-201ENST00000285679 LGALS9BQ3B8N2 356 aa12.11□□□□□ -0.47
USP25-201ENST00000285679 LGALS9CQ6DKI2 356 aa12.11□□□□□ -0.47
USP25-201ENST00000285679 SRSF8Q9BRL6 282 aaKnown RBP12.11□□□□□ -0.47
USP25-201ENST00000285679 WFDC2Q14508 124 aa12.1□□□□□ -0.47
USP25-201ENST00000285679 CR1LQ2VPA4 569 aa12.1□□□□□ -0.47
USP25-201ENST00000285679 NPFFR1Q9GZQ6 430 aa12.1□□□□□ -0.47
USP25-201ENST00000285679 UBTD1Q9HAC8 227 aa12.1□□□□□ -0.47
USP25-201ENST00000285679 RNF182Q8N6D2 247 aa12.1□□□□□ -0.47
USP25-201ENST00000285679 SHANK2-AS3Q9BTD1 123 aa12.1□□□□□ -0.47
USP25-201ENST00000285679 SPRY4Q9C004 299 aa12.1□□□□□ -0.47
USP25-201ENST00000285679 CTSZQ9UBR2 303 aa12.1□□□□□ -0.47
USP25-201ENST00000285679 TMEM78Q5T7P6 136 aa12.1□□□□□ -0.47
USP25-201ENST00000285679 ABCA2Q9BZC7 2435 aa12.1□□□□□ -0.47
USP25-201ENST00000285679 IGLV3-9A0A075B6K5 115 aa12.09□□□□□ -0.47
USP25-201ENST00000285679 VGLL1Q99990 258 aa12.09□□□□□ -0.47
USP25-201ENST00000285679 IGHV3-64A0A075B6Q5 118 aa12.09□□□□□ -0.47
USP25-201ENST00000285679 IGKV1-17P01599 117 aa12.09□□□□□ -0.47
USP25-201ENST00000285679 LOXP28300 417 aaPredicted RBP12.09□□□□□ -0.47
USP25-201ENST00000285679 GAGE13Q4V321 117 aa12.09□□□□□ -0.47
USP25-201ENST00000285679 FAM74A4Q5TZK3 123 aa12.09□□□□□ -0.47
USP25-201ENST00000285679 SPTBN4Q9H254 2564 aa12.09□□□□□ -0.47
USP25-201ENST00000285679 FABP5P3A8MUU1 101 aa12.09□□□□□ -0.47
USP25-201ENST00000285679 TNFRSF6BO95407 300 aa12.09□□□□□ -0.47
USP25-201ENST00000285679 EGR2P11161 476 aaPredicted RBP12.09□□□□□ -0.47
USP25-201ENST00000285679 GATA4P43694 442 aa12.09□□□□□ -0.47
USP25-201ENST00000285679 EFNA4P52798 201 aa12.09□□□□□ -0.47
USP25-201ENST00000285679 PRSS33Q8NF86 280 aa12.09□□□□□ -0.47
USP25-201ENST00000285679 RNASE6Q93091 150 aaKnown RBP12.09□□□□□ -0.47
USP25-201ENST00000285679 SMIM17P0DL12 118 aa12.08□□□□□ -0.48
USP25-201ENST00000285679 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.08□□□□□ -0.48
USP25-201ENST00000285679 G3V4G9 280 aa12.08□□□□□ -0.48
USP25-201ENST00000285679 MRPL35Q9NZE8 188 aaKnown RBP12.08□□□□□ -0.48
USP25-201ENST00000285679 SEM1Q6ZVN7 128 aa12.08□□□□□ -0.48
USP25-201ENST00000285679 C7orf69Q9H7B7 122 aa12.08□□□□□ -0.48
USP25-201ENST00000285679 DMDP11532 3685 aa12.07□□□□□ -0.48
USP25-201ENST00000285679 IGLV2-23P01705 113 aa12.07□□□□□ -0.48
USP25-201ENST00000285679 CD3EP07766 207 aa12.07□□□□□ -0.48
USP25-201ENST00000285679 CEACAM3P40198 252 aa12.07□□□□□ -0.48
USP25-201ENST00000285679 BOD1L2Q8IYS8 172 aa12.07□□□□□ -0.48
USP25-201ENST00000285679 TIMD4Q96H15 378 aa12.07□□□□□ -0.48
USP25-201ENST00000285679 RPS20P60866 119 aaKnown RBP12.07□□□□□ -0.48
USP25-201ENST00000285679 NDPQ00604 133 aa12.07□□□□□ -0.48
USP25-201ENST00000285679 FAM215AQ9Y5M1 114 aa12.07□□□□□ -0.48
USP25-201ENST00000285679 MBD3L4A6NDZ8 208 aaPredicted RBP12.06□□□□□ -0.48
USP25-201ENST00000285679 MBD3L3A6NE82 208 aaPredicted RBP12.06□□□□□ -0.48
USP25-201ENST00000285679 MBD3L5A6NJ08 208 aaPredicted RBP12.06□□□□□ -0.48
USP25-201ENST00000285679 SRD5A1P18405 259 aa12.06□□□□□ -0.48
USP25-201ENST00000285679 PVRIGQ6DKI7 326 aa12.06□□□□□ -0.48
USP25-201ENST00000285679 SIGLEC15Q6ZMC9 328 aa12.06□□□□□ -0.48
USP25-201ENST00000285679 MBD3L2Q8NHZ7 208 aaPredicted RBP12.06□□□□□ -0.48
USP25-201ENST00000285679 SCGB3A1Q96QR1 104 aa12.06□□□□□ -0.48
USP25-201ENST00000285679 TRBV25-1A0A075B6N4 114 aa12.06□□□□□ -0.48
USP25-201ENST00000285679 IGKV2D-26A0A0A0MRZ7 120 aa12.06□□□□□ -0.48
USP25-201ENST00000285679 NBR2O15453 112 aa12.06□□□□□ -0.48
USP25-201ENST00000285679 PRSS2P07478 247 aa12.06□□□□□ -0.48
USP25-201ENST00000285679 CD300EQ496F6 205 aaPredicted RBP12.06□□□□□ -0.48
USP25-201ENST00000285679 C1orf122Q6ZSJ8 110 aa12.06□□□□□ -0.48
USP25-201ENST00000285679 ZNF491Q8N8L2 437 aa12.06□□□□□ -0.48
USP25-201ENST00000285679 NXT2Q9NPJ8 142 aaKnown RBP12.06□□□□□ -0.48
USP25-201ENST00000285679 GAGE12HA6NDE8 117 aa12.06□□□□□ -0.48
USP25-201ENST00000285679 BUB1B-PAK6H3BSN5 160 aa12.06□□□□□ -0.48
USP25-201ENST00000285679 MYCNOSP40205 109 aa12.06□□□□□ -0.48
USP25-201ENST00000285679 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.05□□□□□ -0.48
USP25-201ENST00000285679 RBPJQ06330 500 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms