RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 BVES-AS1Q5T3Y7 98 aa13.48□□□□□ -0.25
TSPAN3-201ENST00000267970 IGLV3-19P01714 112 aa13.48□□□□□ -0.25
TSPAN3-201ENST00000267970 MRPL35Q9NZE8 188 aaKnown RBP13.48□□□□□ -0.25
TSPAN3-201ENST00000267970 IGLC2P0DOY2 106 aa13.48□□□□□ -0.25
TSPAN3-201ENST00000267970 IGLC3P0DOY3 106 aa13.48□□□□□ -0.25
TSPAN3-201ENST00000267970 ANKRD29Q8N6D5 301 aa13.48□□□□□ -0.25
TSPAN3-201ENST00000267970 ZC2HC1AQ96GY0 325 aa13.48□□□□□ -0.25
TSPAN3-201ENST00000267970 SCN5AQ14524 2016 aa13.48□□□□□ -0.25
TSPAN3-201ENST00000267970 C1QTNF4Q9BXJ3 329 aa13.48□□□□□ -0.25
TSPAN3-201ENST00000267970 E7EQL1 145 aa13.47□□□□□ -0.25
TSPAN3-201ENST00000267970 CCL25O15444 150 aa13.47□□□□□ -0.25
TSPAN3-201ENST00000267970 ZNF883P0CG24 379 aa13.47□□□□□ -0.25
TSPAN3-201ENST00000267970 CEND1Q8N111 149 aa13.47□□□□□ -0.25
TSPAN3-201ENST00000267970 DAZ1Q9NQZ3 744 aaKnown RBP13.47□□□□□ -0.25
TSPAN3-201ENST00000267970 CACNA1EQ15878 2313 aa13.47□□□□□ -0.25
TSPAN3-201ENST00000267970 NBL1P41271 181 aa13.47□□□□□ -0.25
TSPAN3-201ENST00000267970 NKAPP1Q8N9T2 125 aa13.47□□□□□ -0.25
TSPAN3-201ENST00000267970 C17orf77Q96MU5 243 aa13.47□□□□□ -0.25
TSPAN3-201ENST00000267970 F8W1H4 67 aa13.46□□□□□ -0.25
TSPAN3-201ENST00000267970 NPYP01303 97 aa13.46□□□□□ -0.25
TSPAN3-201ENST00000267970 CRYGCP07315 174 aa13.46□□□□□ -0.25
TSPAN3-201ENST00000267970 FAM104BQ5XKR9 115 aa13.46□□□□□ -0.25
TSPAN3-201ENST00000267970 SIGLEC8Q9NYZ4 499 aa13.46□□□□□ -0.25
TSPAN3-201ENST00000267970 SPTA1P02549 2419 aa13.46□□□□□ -0.25
TSPAN3-201ENST00000267970 IGLV2-23P01705 113 aa13.46□□□□□ -0.25
TSPAN3-201ENST00000267970 THAP8Q8NA92 274 aa13.46□□□□□ -0.25
TSPAN3-201ENST00000267970 NTN5Q8WTR8 489 aaPredicted RBP13.46□□□□□ -0.25
TSPAN3-201ENST00000267970 TNS1Q9HBL0 1735 aaKnown RBP13.46□□□□□ -0.26
TSPAN3-201ENST00000267970 I3L3M4 83 aa13.45□□□□□ -0.26
TSPAN3-201ENST00000267970 LRRC37AA6NMS7 1700 aa13.45□□□□□ -0.26
TSPAN3-201ENST00000267970 SDHAF1A6NFY7 115 aa13.45□□□□□ -0.26
TSPAN3-201ENST00000267970 MINOS1Q5TGZ0 78 aa13.45□□□□□ -0.26
TSPAN3-201ENST00000267970 MINOS1-NBL1R4GNA1 71 aa13.45□□□□□ -0.26
TSPAN3-201ENST00000267970 XIRP1Q702N8 1843 aaKnown RBP13.45□□□□□ -0.26
TSPAN3-201ENST00000267970 A0A0G2JMZ2 1700 aa13.45□□□□□ -0.26
TSPAN3-201ENST00000267970 LRRC37A2A6NM11 1700 aa13.45□□□□□ -0.26
TSPAN3-201ENST00000267970 FAM223BA6NKX1 122 aa13.45□□□□□ -0.26
TSPAN3-201ENST00000267970 B4DSR2 109 aa13.45□□□□□ -0.26
TSPAN3-201ENST00000267970 INAFM2P0DMQ5 153 aa13.45□□□□□ -0.26
TSPAN3-201ENST00000267970 FAM223AQ8IWN6 122 aa13.45□□□□□ -0.26
TSPAN3-201ENST00000267970 NTN3O00634 580 aaPredicted RBP13.45□□□□□ -0.26
TSPAN3-201ENST00000267970 PFN1P07737 140 aaKnown RBP13.45□□□□□ -0.26
TSPAN3-201ENST00000267970 TAL2Q16559 108 aa13.45□□□□□ -0.26
TSPAN3-201ENST00000267970 LINC01559Q495D7 138 aa13.45□□□□□ -0.26
TSPAN3-201ENST00000267970 LY96Q9Y6Y9 160 aa13.45□□□□□ -0.26
TSPAN3-201ENST00000267970 CGB7P0DN87 165 aa13.45□□□□□ -0.26
TSPAN3-201ENST00000267970 C8orf86Q6ZUL3 223 aa13.45□□□□□ -0.26
TSPAN3-201ENST00000267970 Q0VG73 95 aa13.44□□□□□ -0.26
TSPAN3-201ENST00000267970 Q8N8P6 123 aa13.44□□□□□ -0.26
TSPAN3-201ENST00000267970 FAM110DQ8TAY7 271 aaPredicted RBP13.44□□□□□ -0.26
TSPAN3-201ENST00000267970 TRBV25-1A0A075B6N4 114 aa13.44□□□□□ -0.26
TSPAN3-201ENST00000267970 F6UB75 175 aa13.44□□□□□ -0.26
TSPAN3-201ENST00000267970 LYL1P12980 280 aa13.44□□□□□ -0.26
TSPAN3-201ENST00000267970 B3GALT5-AS1P59052 145 aa13.44□□□□□ -0.26
TSPAN3-201ENST00000267970 FAM120AOSQ5T036 256 aa13.44□□□□□ -0.26
TSPAN3-201ENST00000267970 A0A0J9YY99 117 aa13.44□□□□□ -0.26
TSPAN3-201ENST00000267970 SH2D6Q7Z4S9 175 aa13.44□□□□□ -0.26
TSPAN3-201ENST00000267970 V9GYV3 84 aa13.44□□□□□ -0.26
TSPAN3-201ENST00000267970 SCN10AQ9Y5Y9 1956 aa13.44□□□□□ -0.26
TSPAN3-201ENST00000267970 PRSS29PA6NIE9 313 aa13.44□□□□□ -0.26
TSPAN3-201ENST00000267970 PRSS46E5RG02 174 aa13.44□□□□□ -0.26
TSPAN3-201ENST00000267970 NDUFA12Q9UI09 145 aa13.44□□□□□ -0.26
TSPAN3-201ENST00000267970 COL4A6Q14031 1691 aa13.43□□□□□ -0.26
TSPAN3-201ENST00000267970 IGHV2-70P01814 119 aa13.43□□□□□ -0.26
TSPAN3-201ENST00000267970 SHISA9B4DS77 424 aa13.43□□□□□ -0.26
TSPAN3-201ENST00000267970 MDS2Q8NDY4 140 aa13.43□□□□□ -0.26
TSPAN3-201ENST00000267970 TMEM258P61165 79 aa13.43□□□□□ -0.26
TSPAN3-201ENST00000267970 OR11H6Q8NGC7 330 aa13.43□□□□□ -0.26
TSPAN3-201ENST00000267970 IGF2BP2-AS1Q96M15 143 aa13.43□□□□□ -0.26
TSPAN3-201ENST00000267970 ABCA1O95477 2261 aa13.43□□□□□ -0.26
TSPAN3-201ENST00000267970 KLF5Q13887 457 aaPredicted RBP13.43□□□□□ -0.26
TSPAN3-201ENST00000267970 USMG5Q96IX5 58 aa13.42□□□□□ -0.26
TSPAN3-201ENST00000267970 Q6ZQT7 251 aa13.42□□□□□ -0.26
TSPAN3-201ENST00000267970 LYPD1Q8N2G4 141 aa13.42□□□□□ -0.26
TSPAN3-201ENST00000267970 WFDC9Q8NEX5 89 aa13.42□□□□□ -0.26
TSPAN3-201ENST00000267970 GFRA4Q9GZZ7 299 aa13.42□□□□□ -0.26
TSPAN3-201ENST00000267970 DYSFO75923 2080 aa13.42□□□□□ -0.26
TSPAN3-201ENST00000267970 NRXN2Q9P2S2 1712 aa13.42□□□□□ -0.26
TSPAN3-201ENST00000267970 WDR86Q86TI4 376 aa13.42□□□□□ -0.26
TSPAN3-201ENST00000267970 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.42□□□□□ -0.26
TSPAN3-201ENST00000267970 IGKV2-29A2NJV5 120 aaPredicted RBP13.42□□□□□ -0.26
TSPAN3-201ENST00000267970 GNRH2O43555 120 aa13.42□□□□□ -0.26
TSPAN3-201ENST00000267970 C20orf144Q9BQM9 153 aa13.42□□□□□ -0.26
TSPAN3-201ENST00000267970 MYLKQ15746 1914 aa13.42□□□□□ -0.26
TSPAN3-201ENST00000267970 IGKV3D-7A0A0C4DH55 119 aa13.41□□□□□ -0.26
TSPAN3-201ENST00000267970 RALGAPA2Q2PPJ7 1873 aa13.41□□□□□ -0.26
TSPAN3-201ENST00000267970 M0R1W7 72 aa13.41□□□□□ -0.26
TSPAN3-201ENST00000267970 GATA1P15976 413 aaPredicted RBP13.41□□□□□ -0.26
TSPAN3-201ENST00000267970 XCL1P47992 114 aa13.41□□□□□ -0.26
TSPAN3-201ENST00000267970 WIPF2Q8TF74 440 aaPredicted RBP13.41□□□□□ -0.26
TSPAN3-201ENST00000267970 BAALCQ8WXS3 180 aa13.41□□□□□ -0.26
TSPAN3-201ENST00000267970 PRO1854Q9UHT4 67 aa13.41□□□□□ -0.26
TSPAN3-201ENST00000267970 TRBV19A0A075B6N1 114 aa13.41□□□□□ -0.26
TSPAN3-201ENST00000267970 SPATA25Q9BR10 227 aa13.4□□□□□ -0.26
TSPAN3-201ENST00000267970 ZNF503-AS2A6NEH8 195 aa13.4□□□□□ -0.26
TSPAN3-201ENST00000267970 COX8AP10176 69 aa13.4□□□□□ -0.26
TSPAN3-201ENST00000267970 UTF1Q5T230 341 aa13.4□□□□□ -0.26
TSPAN3-201ENST00000267970 SPTBN1Q01082 2364 aaKnown RBP13.4□□□□□ -0.26
TSPAN3-201ENST00000267970 EGR2P11161 476 aaPredicted RBP13.4□□□□□ -0.26
TSPAN3-201ENST00000267970 CEACAM8P31997 349 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms