RNA–Protein interactions for RNA: ENST00000264107.11

ITGA6-201, Transcript of integrin subunit alpha 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGA6, Length 5,618 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-201ENST00000264107 PRR20CP86479 221 aa14.42□□□□□ -0.1
ITGA6-201ENST00000264107 PRR20DP86480 221 aa14.42□□□□□ -0.1
ITGA6-201ENST00000264107 PRR20BP86481 221 aa14.42□□□□□ -0.1
ITGA6-201ENST00000264107 PRR20AP86496 221 aa14.42□□□□□ -0.1
ITGA6-201ENST00000264107 NEU4Q8WWR8 484 aaPredicted RBP14.42□□□□□ -0.1
ITGA6-201ENST00000264107 RPL36AP83881 106 aaKnown RBP14.42□□□□□ -0.1
ITGA6-201ENST00000264107 NDPQ00604 133 aa14.42□□□□□ -0.1
ITGA6-201ENST00000264107 RPL36ALQ969Q0 106 aaKnown RBP14.42□□□□□ -0.1
ITGA6-201ENST00000264107 CEP250Q9BV73 2442 aa14.42□□□□□ -0.1
ITGA6-201ENST00000264107 TRGV4A0A0C4DH28 118 aa14.42□□□□□ -0.1
ITGA6-201ENST00000264107 CLPSP04118 112 aa14.42□□□□□ -0.1
ITGA6-201ENST00000264107 FAM27E3Q08E93 113 aa14.42□□□□□ -0.1
ITGA6-201ENST00000264107 FRMD6-AS1P0C7T7 363 aa14.41□□□□□ -0.1
ITGA6-201ENST00000264107 PATJQ8NI35 1801 aa14.41□□□□□ -0.1
ITGA6-201ENST00000264107 ZFP36L1Q07352 338 aaKnown RBP14.41□□□□□ -0.1
ITGA6-201ENST00000264107 TRAV13-2A0A0B4J235 113 aa14.41□□□□□ -0.1
ITGA6-201ENST00000264107 TRAV41A0A0B4J266 112 aa14.41□□□□□ -0.1
ITGA6-201ENST00000264107 CRLF1O75462 422 aa14.41□□□□□ -0.1
ITGA6-201ENST00000264107 SIGLEC9Q9Y336 463 aa14.41□□□□□ -0.1
ITGA6-201ENST00000264107 IGHV1-3A0A0C4DH29 117 aa14.4□□□□□ -0.1
ITGA6-201ENST00000264107 A4D1N5 150 aa14.4□□□□□ -0.1
ITGA6-201ENST00000264107 SCN10AQ9Y5Y9 1956 aa14.4□□□□□ -0.1
ITGA6-201ENST00000264107 CCL21O00585 134 aa14.4□□□□□ -0.1
ITGA6-201ENST00000264107 ATP5G1P05496 136 aa14.4□□□□□ -0.1
ITGA6-201ENST00000264107 TMEM200BQ69YZ2 307 aa14.4□□□□□ -0.1
ITGA6-201ENST00000264107 DPH3Q96FX2 82 aa14.4□□□□□ -0.1
ITGA6-201ENST00000264107 DSCR8Q96T75 97 aa14.4□□□□□ -0.1
ITGA6-201ENST00000264107 RPL32P62910 135 aaKnown RBP14.39□□□□□ -0.11
ITGA6-201ENST00000264107 SUMO4Q6EEV6 95 aa14.39□□□□□ -0.11
ITGA6-201ENST00000264107 C2orf70A6NJV1 201 aa14.39□□□□□ -0.11
ITGA6-201ENST00000264107 I3L3M4 83 aa14.39□□□□□ -0.11
ITGA6-201ENST00000264107 ICOSQ9Y6W8 199 aa14.39□□□□□ -0.11
ITGA6-201ENST00000264107 TRBV10-2A0A0K0K1G8 114 aa14.39□□□□□ -0.11
ITGA6-201ENST00000264107 NDUFA4L2Q9NRX3 87 aa14.39□□□□□ -0.11
ITGA6-201ENST00000264107 IGLV3-12A0A075B6K2 115 aa14.39□□□□□ -0.11
ITGA6-201ENST00000264107 PRDM6Q9NQX0 595 aa14.39□□□□□ -0.11
ITGA6-201ENST00000264107 MYLKQ15746 1914 aa14.39□□□□□ -0.11
ITGA6-201ENST00000264107 UQCRQO14949 82 aa14.38□□□□□ -0.11
ITGA6-201ENST00000264107 IGHG2P01859 326 aa14.38□□□□□ -0.11
ITGA6-201ENST00000264107 IGHG3P01860 377 aa14.38□□□□□ -0.11
ITGA6-201ENST00000264107 FOXL2NBQ6ZUU3 175 aa14.38□□□□□ -0.11
ITGA6-201ENST00000264107 COLQQ9Y215 455 aaPredicted RBP14.38□□□□□ -0.11
ITGA6-201ENST00000264107 SIPA1L1O43166 1804 aa14.38□□□□□ -0.11
ITGA6-201ENST00000264107 PRB1P04280 392 aa14.38□□□□□ -0.11
ITGA6-201ENST00000264107 TMEM14CQ9P0S9 112 aa14.38□□□□□ -0.11
ITGA6-201ENST00000264107 AHCTF1Q8WYP5 2266 aa14.38□□□□□ -0.11
ITGA6-201ENST00000264107 RBBP6Q7Z6E9 1792 aaKnown RBP14.37□□□□□ -0.11
ITGA6-201ENST00000264107 PSMB8P28062 276 aa14.37□□□□□ -0.11
ITGA6-201ENST00000264107 IGHV1-18A0A0C4DH31 117 aa14.37□□□□□ -0.11
ITGA6-201ENST00000264107 BSPH1Q075Z2 132 aa14.37□□□□□ -0.11
ITGA6-201ENST00000264107 GGNQ86UU5 652 aa14.37□□□□□ -0.11
ITGA6-201ENST00000264107 A0A0U1RQV1 116 aa14.37□□□□□ -0.11
ITGA6-201ENST00000264107 CRYGBP07316 175 aa14.37□□□□□ -0.11
ITGA6-201ENST00000264107 IGHV1-8P0DP01 117 aa14.37□□□□□ -0.11
ITGA6-201ENST00000264107 PFN2P35080 140 aa14.37□□□□□ -0.11
ITGA6-201ENST00000264107 MUSTN1Q8IVN3 82 aa14.36□□□□□ -0.11
ITGA6-201ENST00000264107 RNF5Q99942 180 aa14.36□□□□□ -0.11
ITGA6-201ENST00000264107 IGKV1D-17A0A075B6S4 117 aa14.36□□□□□ -0.11
ITGA6-201ENST00000264107 IGHV1-46P01743 117 aa14.36□□□□□ -0.11
ITGA6-201ENST00000264107 ATP1A1-AS1Q5TC04 95 aa14.36□□□□□ -0.11
ITGA6-201ENST00000264107 KLHL30-AS1Q8NEE0 82 aa14.36□□□□□ -0.11
ITGA6-201ENST00000264107 GREB1Q4ZG55 1949 aa14.36□□□□□ -0.11
ITGA6-201ENST00000264107 F6UB75 175 aa14.36□□□□□ -0.11
ITGA6-201ENST00000264107 ETV2O00321 342 aaPredicted RBP14.36□□□□□ -0.11
ITGA6-201ENST00000264107 PI4KAP42356 2102 aa14.36□□□□□ -0.11
ITGA6-201ENST00000264107 SDK2Q58EX2 2172 aa14.35□□□□□ -0.11
ITGA6-201ENST00000264107 CTRLP40313 264 aa14.35□□□□□ -0.11
ITGA6-201ENST00000264107 STHQ8IWL8 128 aa14.35□□□□□ -0.11
ITGA6-201ENST00000264107 SAP25Q8TEE9 199 aa14.35□□□□□ -0.11
ITGA6-201ENST00000264107 TP73-AS1Q9UF72 201 aa14.35□□□□□ -0.11
ITGA6-201ENST00000264107 MRPL55Q7Z7F7 128 aaKnown RBP14.35□□□□□ -0.11
ITGA6-201ENST00000264107 AKAP6Q13023 2319 aa14.35□□□□□ -0.11
ITGA6-201ENST00000264107 GATA1P15976 413 aaPredicted RBP14.34□□□□□ -0.11
ITGA6-201ENST00000264107 NBL1P41271 181 aa14.34□□□□□ -0.11
ITGA6-201ENST00000264107 C9orf106Q8NAJ2 232 aa14.34□□□□□ -0.11
ITGA6-201ENST00000264107 HERVK_113P63121 156 aa14.34□□□□□ -0.11
ITGA6-201ENST00000264107 IGF2BP2-AS1Q96M15 143 aa14.34□□□□□ -0.11
ITGA6-201ENST00000264107 SPTA1P02549 2419 aa14.34□□□□□ -0.11
ITGA6-201ENST00000264107 YPEL4Q96NS1 127 aa14.33□□□□□ -0.11
ITGA6-201ENST00000264107 H3BT86 120 aa14.33□□□□□ -0.12
ITGA6-201ENST00000264107 PHF3Q92576 2039 aaKnown RBP14.33□□□□□ -0.12
ITGA6-201ENST00000264107 DKK1O94907 266 aa14.33□□□□□ -0.12
ITGA6-201ENST00000264107 SRSF2Q01130 221 aaKnown RBP14.33□□□□□ -0.12
ITGA6-201ENST00000264107 C3orf22Q8N5N4 141 aa14.33□□□□□ -0.12
ITGA6-201ENST00000264107 M0QXV9 152 aa14.32□□□□□ -0.12
ITGA6-201ENST00000264107 Q6ZR03 302 aa14.32□□□□□ -0.12
ITGA6-201ENST00000264107 LINC00643Q86TS7 51 aa14.32□□□□□ -0.12
ITGA6-201ENST00000264107 GTSF1Q8WW33 167 aa14.32□□□□□ -0.12
ITGA6-201ENST00000264107 ORMDL1Q9P0S3 153 aa14.32□□□□□ -0.12
ITGA6-201ENST00000264107 TCL1BO95988 128 aa14.32□□□□□ -0.12
ITGA6-201ENST00000264107 H3BRN7 92 aa14.32□□□□□ -0.12
ITGA6-201ENST00000264107 E9PLD3 99 aa14.31□□□□□ -0.12
ITGA6-201ENST00000264107 F8WEM9 126 aa14.31□□□□□ -0.12
ITGA6-201ENST00000264107 K7EM74 188 aa14.31□□□□□ -0.12
ITGA6-201ENST00000264107 GAFA1Q96PS6 74 aa14.31□□□□□ -0.12
ITGA6-201ENST00000264107 IGHV3-53P01767 116 aa14.31□□□□□ -0.12
ITGA6-201ENST00000264107 Q8N1Y9 231 aa14.31□□□□□ -0.12
ITGA6-201ENST00000264107 TRGV1A0A0A0MS02 117 aa14.31□□□□□ -0.12
ITGA6-201ENST00000264107 PINLYPA6NC86 204 aa14.31□□□□□ -0.12
ITGA6-201ENST00000264107 ZNRD1Q9P1U0 126 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms