RNA–Protein interactions for RNA: ENST00000258947.7

CALCOCO2-201, Transcript of calcium binding and coiled-coil domain 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CALCOCO2, Length 3,682 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-201ENST00000258947 ZNF418Q8TF45 676 aaPredicted RBP6.69□□□□□ -1.34
CALCOCO2-201ENST00000258947 SMAD5-AS1Q9Y6J3 95 aa6.69□□□□□ -1.34
CALCOCO2-201ENST00000258947 UBE2CO00762 179 aa6.69□□□□□ -1.34
CALCOCO2-201ENST00000258947 ZNF688P0C7X2 276 aa6.69□□□□□ -1.34
CALCOCO2-201ENST00000258947 HOXA5P20719 270 aa6.69□□□□□ -1.34
CALCOCO2-201ENST00000258947 HBBP68871 147 aa6.69□□□□□ -1.34
CALCOCO2-201ENST00000258947 C1orf194Q5T5A4 169 aa6.69□□□□□ -1.34
CALCOCO2-201ENST00000258947 RBPMS2Q6ZRY4 209 aaKnown RBP6.69□□□□□ -1.34
CALCOCO2-201ENST00000258947 PYGO2Q9BRQ0 406 aa6.69□□□□□ -1.34
CALCOCO2-201ENST00000258947 UFC1Q9Y3C8 167 aa6.69□□□□□ -1.34
CALCOCO2-201ENST00000258947 KLF12Q9Y4X4 402 aa6.69□□□□□ -1.34
CALCOCO2-201ENST00000258947 SCGB1D1O95968 90 aa6.68□□□□□ -1.34
CALCOCO2-201ENST00000258947 ID1P41134 155 aa6.68□□□□□ -1.34
CALCOCO2-201ENST00000258947 RNASEKQ6P5S7 137 aaKnown RBP6.68□□□□□ -1.34
CALCOCO2-201ENST00000258947 DYNLRB2Q8TF09 96 aa6.68□□□□□ -1.34
CALCOCO2-201ENST00000258947 SMR3AQ99954 134 aa6.68□□□□□ -1.34
CALCOCO2-201ENST00000258947 NRN1Q9NPD7 142 aa6.68□□□□□ -1.34
CALCOCO2-201ENST00000258947 TRAV9-1A0A075B6T8 112 aa6.68□□□□□ -1.34
CALCOCO2-201ENST00000258947 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.68□□□□□ -1.34
CALCOCO2-201ENST00000258947 SH2D1AO60880 128 aa6.68□□□□□ -1.34
CALCOCO2-201ENST00000258947 COX19Q49B96 90 aa6.68□□□□□ -1.34
CALCOCO2-201ENST00000258947 TMEM190Q8WZ59 177 aa6.68□□□□□ -1.34
CALCOCO2-201ENST00000258947 PRR25Q96S07 402 aa6.68□□□□□ -1.34
CALCOCO2-201ENST00000258947 CLPSL1A2RUU4 121 aa6.68□□□□□ -1.34
CALCOCO2-201ENST00000258947 F6UB75 175 aa6.68□□□□□ -1.34
CALCOCO2-201ENST00000258947 IGHG4P01861 327 aa6.68□□□□□ -1.34
CALCOCO2-201ENST00000258947 TYMSP04818 313 aa6.68□□□□□ -1.34
CALCOCO2-201ENST00000258947 GPX1P07203 203 aa6.68□□□□□ -1.34
CALCOCO2-201ENST00000258947 RIGQ13278 110 aa6.68□□□□□ -1.34
CALCOCO2-201ENST00000258947 SCGB2A2Q13296 93 aa6.68□□□□□ -1.34
CALCOCO2-201ENST00000258947 TWIST1Q15672 202 aa6.68□□□□□ -1.34
CALCOCO2-201ENST00000258947 FAM231DQ6ZW35 169 aa6.68□□□□□ -1.34
CALCOCO2-201ENST00000258947 MBD6Q96DN6 1003 aa6.68□□□□□ -1.34
CALCOCO2-201ENST00000258947 IGHV7-4-1A0A0J9YVY3 117 aa6.67□□□□□ -1.34
CALCOCO2-201ENST00000258947 A0A1B0GUT8 65 aa6.67□□□□□ -1.34
CALCOCO2-201ENST00000258947 HSBP1O75506 76 aa6.67□□□□□ -1.34
CALCOCO2-201ENST00000258947 HTN1P15515 57 aa6.67□□□□□ -1.34
CALCOCO2-201ENST00000258947 C9orf139Q6ZV77 190 aa6.67□□□□□ -1.34
CALCOCO2-201ENST00000258947 TMEM256Q8N2U0 113 aa6.67□□□□□ -1.34
CALCOCO2-201ENST00000258947 OR11H1Q8NG94 326 aa6.67□□□□□ -1.34
CALCOCO2-201ENST00000258947 SMIM27A0A1W2PRY6 76 aa6.67□□□□□ -1.34
CALCOCO2-201ENST00000258947 MRPS12O15235 138 aaKnown RBP6.67□□□□□ -1.34
CALCOCO2-201ENST00000258947 ELANEP08246 267 aa6.67□□□□□ -1.34
CALCOCO2-201ENST00000258947 HOXD3P31249 432 aaPredicted RBP6.67□□□□□ -1.34
CALCOCO2-201ENST00000258947 AMTP48728 403 aa6.67□□□□□ -1.34
CALCOCO2-201ENST00000258947 PAFAH1B2P68402 229 aa6.67□□□□□ -1.34
CALCOCO2-201ENST00000258947 PSMG4Q5JS54 123 aa6.67□□□□□ -1.34
CALCOCO2-201ENST00000258947 GNB1LQ9BYB4 327 aa6.67□□□□□ -1.34
CALCOCO2-201ENST00000258947 IGHV4OR15-8A0A075B7B6 117 aa6.66□□□□□ -1.34
CALCOCO2-201ENST00000258947 A0A087WW49 117 aa6.66□□□□□ -1.34
CALCOCO2-201ENST00000258947 DNAJC9-AS1A6NH13 148 aa6.66□□□□□ -1.34
CALCOCO2-201ENST00000258947 FABP5P3A8MUU1 101 aa6.66□□□□□ -1.34
CALCOCO2-201ENST00000258947 IGLV1-40P01703 118 aa6.66□□□□□ -1.34
CALCOCO2-201ENST00000258947 EDN2P20800 178 aa6.66□□□□□ -1.34
CALCOCO2-201ENST00000258947 ZNF138P52744 262 aa6.66□□□□□ -1.34
CALCOCO2-201ENST00000258947 LINC00518Q8N0U6 118 aa6.66□□□□□ -1.34
CALCOCO2-201ENST00000258947 HIST3H2BBQ8N257 126 aa6.66□□□□□ -1.34
CALCOCO2-201ENST00000258947 SMIM12Q96EX1 92 aa6.66□□□□□ -1.34
CALCOCO2-201ENST00000258947 ZNF702PQ9H963 129 aa6.66□□□□□ -1.34
CALCOCO2-201ENST00000258947 PSMB8P28062 276 aa6.66□□□□□ -1.34
CALCOCO2-201ENST00000258947 SNRPD3P62318 126 aaKnown RBP6.66□□□□□ -1.34
CALCOCO2-201ENST00000258947 S100A12P80511 92 aa6.66□□□□□ -1.34
CALCOCO2-201ENST00000258947 IQCJQ1A5X6 159 aa6.66□□□□□ -1.34
CALCOCO2-201ENST00000258947 C16orf54Q6UWD8 224 aa6.66□□□□□ -1.34
CALCOCO2-201ENST00000258947 H0Y8G0 127 aa6.66□□□□□ -1.34
CALCOCO2-201ENST00000258947 SERF1AO75920 110 aa6.66□□□□□ -1.34
CALCOCO2-201ENST00000258947 ARMS2P0C7Q2 107 aa6.66□□□□□ -1.34
CALCOCO2-201ENST00000258947 SLURP1P55000 103 aa6.66□□□□□ -1.34
CALCOCO2-201ENST00000258947 MLST8Q9BVC4 326 aa6.66□□□□□ -1.34
CALCOCO2-201ENST00000258947 AGPAT4-IT1Q9H0P7 198 aa6.66□□□□□ -1.34
CALCOCO2-201ENST00000258947 SMPXQ9UHP9 88 aa6.66□□□□□ -1.34
CALCOCO2-201ENST00000258947 MXRA5Q9NR99 2828 aa6.66□□□□□ -1.34
CALCOCO2-201ENST00000258947 IGLV2-11P01706 119 aa6.65□□□□□ -1.34
CALCOCO2-201ENST00000258947 LGALS1P09382 135 aaKnown RBP6.65□□□□□ -1.34
CALCOCO2-201ENST00000258947 RNASE4P34096 147 aaKnown RBP6.65□□□□□ -1.34
CALCOCO2-201ENST00000258947 KRTDAPP60985 99 aa6.65□□□□□ -1.34
CALCOCO2-201ENST00000258947 SLAQ13239 276 aa6.65□□□□□ -1.34
CALCOCO2-201ENST00000258947 SMIM15Q7Z3B0 74 aa6.65□□□□□ -1.34
CALCOCO2-201ENST00000258947 ZNF492Q9P255 531 aa6.65□□□□□ -1.34
CALCOCO2-201ENST00000258947 CRIP2P52943 208 aaPredicted RBP6.65□□□□□ -1.34
CALCOCO2-201ENST00000258947 FOXE3Q13461 319 aa6.65□□□□□ -1.34
CALCOCO2-201ENST00000258947 LYZL1Q6UWQ5 148 aa6.65□□□□□ -1.34
CALCOCO2-201ENST00000258947 TMEM136Q6ZRR5 245 aa6.65□□□□□ -1.34
CALCOCO2-201ENST00000258947 C18orf65Q6ZTR6 163 aa6.65□□□□□ -1.34
CALCOCO2-201ENST00000258947 FER1L6-AS1Q8NA97 138 aa6.65□□□□□ -1.34
CALCOCO2-201ENST00000258947 GTSF1Q8WW33 167 aa6.65□□□□□ -1.34
CALCOCO2-201ENST00000258947 HIST1H2BLQ99880 126 aa6.65□□□□□ -1.34
CALCOCO2-201ENST00000258947 SPANXN1Q5VSR9 72 aa6.65□□□□□ -1.35
CALCOCO2-201ENST00000258947 EBLN2Q6P2I7 272 aa6.65□□□□□ -1.35
CALCOCO2-201ENST00000258947 CR1P17927 2039 aa6.65□□□□□ -1.35
CALCOCO2-201ENST00000258947 KRTAP1-3Q8IUG1 177 aa6.64□□□□□ -1.35
CALCOCO2-201ENST00000258947 LOC389332A0A1B0GUA5 103 aa6.64□□□□□ -1.35
CALCOCO2-201ENST00000258947 FBLL1A6NHQ2 334 aaKnown RBP6.64□□□□□ -1.35
CALCOCO2-201ENST00000258947 PHOX2AO14813 284 aa6.64□□□□□ -1.35
CALCOCO2-201ENST00000258947 SMIM6P0DI80 62 aa6.64□□□□□ -1.35
CALCOCO2-201ENST00000258947 TCTEX1D4Q5JR98 221 aa6.64□□□□□ -1.35
CALCOCO2-201ENST00000258947 FAM19A2Q8N3H0 131 aa6.64□□□□□ -1.35
CALCOCO2-201ENST00000258947 FOXC2Q99958 501 aa6.64□□□□□ -1.35
CALCOCO2-201ENST00000258947 NF1P21359 2839 aa6.64□□□□□ -1.35
CALCOCO2-201ENST00000258947 F2Z2F3 143 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms