RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 SPCS1Q9Y6A9 102 aa3.74□□□□□ -1.81
USP44-201ENST00000258499 NDUFS7O75251 213 aa3.73□□□□□ -1.81
USP44-201ENST00000258499 NDUFA3O95167 84 aa3.73□□□□□ -1.81
USP44-201ENST00000258499 IGHV3-11P01762 117 aa3.73□□□□□ -1.81
USP44-201ENST00000258499 ANKRD39Q53RE8 183 aa3.73□□□□□ -1.81
USP44-201ENST00000258499 SFTA2Q6UW10 78 aa3.73□□□□□ -1.81
USP44-201ENST00000258499 PRSS22Q9GZN4 317 aa3.73□□□□□ -1.81
USP44-201ENST00000258499 MEGF9Q9H1U4 602 aa3.73□□□□□ -1.81
USP44-201ENST00000258499 CST9LQ9H4G1 147 aa3.73□□□□□ -1.81
USP44-201ENST00000258499 TMEM14CQ9P0S9 112 aa3.73□□□□□ -1.81
USP44-201ENST00000258499 PTPN13Q12923 2485 aa3.73□□□□□ -1.81
USP44-201ENST00000258499 DCHS1Q96JQ0 3298 aa3.73□□□□□ -1.81
USP44-201ENST00000258499 INS-IGF2F8WCM5 200 aa3.73□□□□□ -1.81
USP44-201ENST00000258499 G3V318 75 aa3.73□□□□□ -1.81
USP44-201ENST00000258499 SPRY2O43597 315 aa3.73□□□□□ -1.81
USP44-201ENST00000258499 FCN3O75636 299 aa3.73□□□□□ -1.81
USP44-201ENST00000258499 SMIM17P0DL12 118 aa3.73□□□□□ -1.81
USP44-201ENST00000258499 EGR2P11161 476 aaPredicted RBP3.73□□□□□ -1.81
USP44-201ENST00000258499 HTN1P15515 57 aa3.73□□□□□ -1.81
USP44-201ENST00000258499 GATA1P15976 413 aaPredicted RBP3.73□□□□□ -1.81
USP44-201ENST00000258499 KIR3DS1Q14943 382 aa3.73□□□□□ -1.81
USP44-201ENST00000258499 LYPD1Q8N2G4 141 aa3.73□□□□□ -1.81
USP44-201ENST00000258499 OR2K2Q8NGT1 345 aa3.73□□□□□ -1.81
USP44-201ENST00000258499 ZNF502Q8TBZ5 544 aa3.73□□□□□ -1.81
USP44-201ENST00000258499 PRR25Q96S07 402 aa3.73□□□□□ -1.81
USP44-201ENST00000258499 HIST1H4GQ99525 98 aa3.73□□□□□ -1.81
USP44-201ENST00000258499 TTTY13Q9BZ97 58 aa3.73□□□□□ -1.81
USP44-201ENST00000258499 USP9YO00507 2555 aaPredicted RBP3.73□□□□□ -1.81
USP44-201ENST00000258499 MYO9AB2RTY4 2548 aa3.73□□□□□ -1.81
USP44-201ENST00000258499 A0A0G2JLM5 398 aa3.73□□□□□ -1.81
USP44-201ENST00000258499 H3BVH4 76 aa3.73□□□□□ -1.81
USP44-201ENST00000258499 CD5LO43866 347 aa3.73□□□□□ -1.81
USP44-201ENST00000258499 COX8AP10176 69 aa3.73□□□□□ -1.81
USP44-201ENST00000258499 PF4V1P10720 104 aa3.73□□□□□ -1.81
USP44-201ENST00000258499 MYCNOSP40205 109 aa3.73□□□□□ -1.81
USP44-201ENST00000258499 ZNF562Q6V9R5 426 aa3.73□□□□□ -1.81
USP44-201ENST00000258499 PCP2Q8IVA1 136 aa3.73□□□□□ -1.81
USP44-201ENST00000258499 WFDC12Q8WWY7 111 aa3.73□□□□□ -1.81
USP44-201ENST00000258499 DKK2Q9UBU2 259 aa3.73□□□□□ -1.81
USP44-201ENST00000258499 PHLDA3Q9Y5J5 127 aa3.73□□□□□ -1.81
USP44-201ENST00000258499 DSCAML1Q8TD84 2053 aa3.73□□□□□ -1.81
USP44-201ENST00000258499 TRAV26-2A0A0B4J265 109 aa3.73□□□□□ -1.81
USP44-201ENST00000258499 IGKV3-20P01619 116 aa3.73□□□□□ -1.81
USP44-201ENST00000258499 SEC11AP67812 179 aa3.73□□□□□ -1.81
USP44-201ENST00000258499 SRSF9Q13242 221 aaKnown RBP eCLIP3.73□□□□□ -1.81
USP44-201ENST00000258499 ZC2HC1BQ5TFG8 222 aa3.73□□□□□ -1.81
USP44-201ENST00000258499 TMEM158Q8WZ71 300 aa3.73□□□□□ -1.81
USP44-201ENST00000258499 URB1-AS1Q96HZ7 61 aa3.73□□□□□ -1.81
USP44-201ENST00000258499 RNF5Q99942 180 aa3.73□□□□□ -1.81
USP44-201ENST00000258499 TNRC6BQ9UPQ9 1833 aaKnown RBP3.72□□□□□ -1.81
USP44-201ENST00000258499 IGHV2-70DA0A0C4DH43 119 aa3.72□□□□□ -1.81
USP44-201ENST00000258499 TMEM238LA0A1B0GVL6 79 aa3.72□□□□□ -1.81
USP44-201ENST00000258499 TAX1BP3O14907 124 aa3.72□□□□□ -1.81
USP44-201ENST00000258499 TRGV3P03979 118 aa3.72□□□□□ -1.81
USP44-201ENST00000258499 SMIM13P0DJ93 91 aa3.72□□□□□ -1.81
USP44-201ENST00000258499 SRD5A1P18405 259 aa3.72□□□□□ -1.81
USP44-201ENST00000258499 PRTN3P24158 256 aa3.72□□□□□ -1.81
USP44-201ENST00000258499 TMEM95Q3KNT9 176 aa3.72□□□□□ -1.81
USP44-201ENST00000258499 OCIAD2Q56VL3 154 aa3.72□□□□□ -1.81
USP44-201ENST00000258499 IL17RELQ6ZVW7 336 aa3.72□□□□□ -1.81
USP44-201ENST00000258499 DEFB125Q8N687 156 aa3.72□□□□□ -1.81
USP44-201ENST00000258499 C8orf31Q8N9H6 132 aa3.72□□□□□ -1.81
USP44-201ENST00000258499 ATMQ13315 3056 aa3.72□□□□□ -1.81
USP44-201ENST00000258499 ZFHX4Q86UP3 3567 aa3.72□□□□□ -1.81
USP44-201ENST00000258499 K7EMI3 77 aa3.72□□□□□ -1.81
USP44-201ENST00000258499 SMAD7O15105 426 aaKnown RBP3.72□□□□□ -1.81
USP44-201ENST00000258499 TNFRSF6BO95407 300 aa3.72□□□□□ -1.81
USP44-201ENST00000258499 HSD52Q0P140 79 aa3.72□□□□□ -1.81
USP44-201ENST00000258499 PDE6HQ13956 83 aa3.72□□□□□ -1.81
USP44-201ENST00000258499 Q8NA96 180 aa3.72□□□□□ -1.81
USP44-201ENST00000258499 EEF1AKMT3Q96AZ1 226 aa3.72□□□□□ -1.81
USP44-201ENST00000258499 SCRT2Q9NQ03 307 aa3.72□□□□□ -1.81
USP44-201ENST00000258499 RAXQ9Y2V3 346 aa3.72□□□□□ -1.81
USP44-201ENST00000258499 ATP6V0E1O15342 81 aa3.72□□□□□ -1.81
USP44-201ENST00000258499 CRIP1P50238 77 aa3.72□□□□□ -1.81
USP44-201ENST00000258499 ATP5G2Q06055 141 aa3.72□□□□□ -1.81
USP44-201ENST00000258499 FAM74A4Q5TZK3 123 aa3.72□□□□□ -1.81
USP44-201ENST00000258499 LINC01545Q5VT33 79 aa3.72□□□□□ -1.81
USP44-201ENST00000258499 DYNAPQ8N1N2 210 aa3.72□□□□□ -1.81
USP44-201ENST00000258499 OR10J6PQ8NGY7 276 aa3.72□□□□□ -1.81
USP44-201ENST00000258499 C7orf69Q9H7B7 122 aa3.72□□□□□ -1.81
USP44-201ENST00000258499 SETD2Q9BYW2 2564 aaPredicted RBP3.71□□□□□ -1.82
USP44-201ENST00000258499 TRAV40A0A0B4J280 105 aa3.71□□□□□ -1.82
USP44-201ENST00000258499 IGKCP01834 107 aa3.71□□□□□ -1.82
USP44-201ENST00000258499 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.71□□□□□ -1.82
USP44-201ENST00000258499 BRD3OSQ6XYD6 125 aa3.71□□□□□ -1.82
USP44-201ENST00000258499 LCNL1Q6ZST4 164 aa3.71□□□□□ -1.82
USP44-201ENST00000258499 MTURNQ8N3F0 131 aa3.71□□□□□ -1.82
USP44-201ENST00000258499 NXT2Q9NPJ8 142 aaKnown RBP3.71□□□□□ -1.82
USP44-201ENST00000258499 TLN2Q9Y4G6 2542 aa3.71□□□□□ -1.82
USP44-201ENST00000258499 MAP1AP78559 2803 aaPredicted RBP3.71□□□□□ -1.82
USP44-201ENST00000258499 WNK1Q9H4A3 2382 aa3.71□□□□□ -1.82
USP44-201ENST00000258499 LOC107984156A0A0G2JMH3 177 aa3.71□□□□□ -1.82
USP44-201ENST00000258499 OR11H12B2RN74 326 aa3.71□□□□□ -1.82
USP44-201ENST00000258499 PRAC2D3DTV9 90 aa3.71□□□□□ -1.82
USP44-201ENST00000258499 J3QR89 54 aa3.71□□□□□ -1.82
USP44-201ENST00000258499 DPM2O94777 84 aa3.71□□□□□ -1.82
USP44-201ENST00000258499 IGLV2-11P01706 119 aa3.71□□□□□ -1.82
USP44-201ENST00000258499 PPBPP02775 128 aa3.71□□□□□ -1.82
USP44-201ENST00000258499 SAA4P35542 130 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms