RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 CT45A10P0DMU9 189 aa10.32□□□□□ -0.76
VPS25-201ENST00000253794 BCL2P10415 239 aa10.32□□□□□ -0.76
VPS25-201ENST00000253794 SBSPONQ8IVN8 264 aa10.32□□□□□ -0.76
VPS25-201ENST00000253794 CYB561D1Q8N8Q1 229 aa10.32□□□□□ -0.76
VPS25-201ENST00000253794 VGLL1Q99990 258 aa10.32□□□□□ -0.76
VPS25-201ENST00000253794 C1QTNF4Q9BXJ3 329 aa10.32□□□□□ -0.76
VPS25-201ENST00000253794 GNG13Q9P2W3 67 aa10.32□□□□□ -0.76
VPS25-201ENST00000253794 TP53TG1Q9Y2A0 90 aa10.32□□□□□ -0.76
VPS25-201ENST00000253794 HUWE1Q7Z6Z7 4374 aaKnown RBP10.31□□□□□ -0.76
VPS25-201ENST00000253794 NDUFS6O75380 124 aaKnown RBP10.31□□□□□ -0.76
VPS25-201ENST00000253794 CRISP2P16562 243 aa10.31□□□□□ -0.76
VPS25-201ENST00000253794 ATP5G3P48201 142 aa10.31□□□□□ -0.76
VPS25-201ENST00000253794 ZNF138P52744 262 aa10.31□□□□□ -0.76
VPS25-201ENST00000253794 GNG5P63218 68 aa10.31□□□□□ -0.76
VPS25-201ENST00000253794 TMEM78Q5T7P6 136 aa10.31□□□□□ -0.76
VPS25-201ENST00000253794 CST9LP1Q5W188 147 aa10.31□□□□□ -0.76
VPS25-201ENST00000253794 GOLT1AQ6ZVE7 132 aa10.31□□□□□ -0.76
VPS25-201ENST00000253794 TMEM75Q8N9X5 138 aa10.31□□□□□ -0.76
VPS25-201ENST00000253794 CSNK1G2-AS1Q8NCQ2 148 aa10.31□□□□□ -0.76
VPS25-201ENST00000253794 SLC35B3Q9H1N7 401 aa10.31□□□□□ -0.76
VPS25-201ENST00000253794 ZNF492Q9P255 531 aa10.31□□□□□ -0.76
VPS25-201ENST00000253794 KLF12Q9Y4X4 402 aa10.31□□□□□ -0.76
VPS25-201ENST00000253794 C11orf94C9JXX5 98 aa10.3□□□□□ -0.76
VPS25-201ENST00000253794 F6UZH7 168 aa10.3□□□□□ -0.76
VPS25-201ENST00000253794 K7EQM0 130 aa10.3□□□□□ -0.76
VPS25-201ENST00000253794 PEX7O00628 323 aa10.3□□□□□ -0.76
VPS25-201ENST00000253794 CA1P00915 261 aaPredicted RBP10.3□□□□□ -0.76
VPS25-201ENST00000253794 IGKV3-20P01619 116 aa10.3□□□□□ -0.76
VPS25-201ENST00000253794 IGLV2-11P01706 119 aa10.3□□□□□ -0.76
VPS25-201ENST00000253794 NHLRC4P0CG21 123 aaPredicted RBP10.3□□□□□ -0.76
VPS25-201ENST00000253794 MEF2BQ02080 365 aaPredicted RBP10.3□□□□□ -0.76
VPS25-201ENST00000253794 ERCC8Q13216 396 aa10.3□□□□□ -0.76
VPS25-201ENST00000253794 C11orf52Q96A22 123 aa10.3□□□□□ -0.76
VPS25-201ENST00000253794 NBEAL2Q6ZNJ1 2754 aa10.3□□□□□ -0.76
VPS25-201ENST00000253794 TRBV6-1A0A0K0K1D8 114 aa10.29□□□□□ -0.76
VPS25-201ENST00000253794 LOC102723971A0A1B0GUV8 181 aa10.29□□□□□ -0.76
VPS25-201ENST00000253794 KLLNB2CW77 178 aa10.29□□□□□ -0.76
VPS25-201ENST00000253794 CRXO43186 299 aaPredicted RBP10.29□□□□□ -0.76
VPS25-201ENST00000253794 PRB4P10163 310 aaPredicted RBP10.29□□□□□ -0.76
VPS25-201ENST00000253794 TSPOP30536 169 aa10.29□□□□□ -0.76
VPS25-201ENST00000253794 LEPP41159 167 aa10.29□□□□□ -0.76
VPS25-201ENST00000253794 CDKN1BP46527 198 aa10.29□□□□□ -0.76
VPS25-201ENST00000253794 C2CD4CQ8TF44 421 aa10.29□□□□□ -0.76
VPS25-201ENST00000253794 RNF183Q96D59 192 aa10.29□□□□□ -0.76
VPS25-201ENST00000253794 IGF2BP2-AS1Q96M15 143 aa10.29□□□□□ -0.76
VPS25-201ENST00000253794 VAX2Q9UIW0 290 aa10.29□□□□□ -0.76
VPS25-201ENST00000253794 COL7A1Q02388 2944 aa10.29□□□□□ -0.76
VPS25-201ENST00000253794 PDE6DO43924 150 aa10.28□□□□□ -0.76
VPS25-201ENST00000253794 SPINK13Q1W4C9 94 aa10.28□□□□□ -0.76
VPS25-201ENST00000253794 ZNF506Q5JVG8 444 aa10.28□□□□□ -0.76
VPS25-201ENST00000253794 ZFAND2AQ8N6M9 145 aa10.28□□□□□ -0.76
VPS25-201ENST00000253794 FAM210AQ96ND0 272 aa10.28□□□□□ -0.76
VPS25-201ENST00000253794 C20orf144Q9BQM9 153 aa10.28□□□□□ -0.76
VPS25-201ENST00000253794 SPATA25Q9BR10 227 aa10.28□□□□□ -0.76
VPS25-201ENST00000253794 RPH3ALQ9UNE2 315 aa10.28□□□□□ -0.76
VPS25-201ENST00000253794 TRAV8-1A0A0A6YYK1 113 aa10.27□□□□□ -0.77
VPS25-201ENST00000253794 RBFOX3A6NFN3 312 aa10.27□□□□□ -0.77
VPS25-201ENST00000253794 M0R2Z0 102 aa10.27□□□□□ -0.77
VPS25-201ENST00000253794 RGS13O14921 159 aa10.27□□□□□ -0.77
VPS25-201ENST00000253794 S100A9P06702 114 aaKnown RBP10.27□□□□□ -0.77
VPS25-201ENST00000253794 FLI1Q01543 452 aaPredicted RBP10.27□□□□□ -0.77
VPS25-201ENST00000253794 CLLU1Q5K131 121 aa10.27□□□□□ -0.77
VPS25-201ENST00000253794 ZNF705AQ6ZN79 300 aaPredicted RBP10.27□□□□□ -0.77
VPS25-201ENST00000253794 COX8CQ7Z4L0 72 aa10.27□□□□□ -0.77
VPS25-201ENST00000253794 FMC1Q96HJ9 113 aa10.27□□□□□ -0.77
VPS25-201ENST00000253794 OVOL2Q9BRP0 275 aa10.27□□□□□ -0.77
VPS25-201ENST00000253794 PSG8Q9UQ74 426 aa10.27□□□□□ -0.77
VPS25-201ENST00000253794 TENM3Q9P273 2699 aa10.26□□□□□ -0.77
VPS25-201ENST00000253794 SCO2A0A1W2PP80 73 aa10.26□□□□□ -0.77
VPS25-201ENST00000253794 INSP01308 110 aa10.26□□□□□ -0.77
VPS25-201ENST00000253794 RAB14P61106 215 aa10.26□□□□□ -0.77
VPS25-201ENST00000253794 TMEM183BQ1AE95 376 aa10.26□□□□□ -0.77
VPS25-201ENST00000253794 DEFB135Q30KP9 77 aa10.26□□□□□ -0.77
VPS25-201ENST00000253794 GFI1BQ5VTD9 330 aa10.26□□□□□ -0.77
VPS25-201ENST00000253794 Q8TAT8 98 aa10.26□□□□□ -0.77
VPS25-201ENST00000253794 TVP23CQ96ET8 276 aa10.26□□□□□ -0.77
VPS25-201ENST00000253794 RCHY1Q96PM5 261 aa10.26□□□□□ -0.77
VPS25-201ENST00000253794 ASCL2Q99929 193 aa10.26□□□□□ -0.77
VPS25-201ENST00000253794 XCL2Q9UBD3 114 aa10.26□□□□□ -0.77
VPS25-201ENST00000253794 TMEM250H0YL14 139 aa10.25□□□□□ -0.77
VPS25-201ENST00000253794 SPRY2O43597 315 aa10.25□□□□□ -0.77
VPS25-201ENST00000253794 FXYD7P58549 80 aa10.25□□□□□ -0.77
VPS25-201ENST00000253794 SAPCD1Q5SSQ6 148 aa10.25□□□□□ -0.77
VPS25-201ENST00000253794 Q86TA4 180 aa10.25□□□□□ -0.77
VPS25-201ENST00000253794 C1orf158Q8N1D5 194 aa10.25□□□□□ -0.77
VPS25-201ENST00000253794 PCNPQ8WW12 178 aaKnown RBP10.25□□□□□ -0.77
VPS25-201ENST00000253794 LINC00479Q96M42 142 aa10.25□□□□□ -0.77
VPS25-201ENST00000253794 NEU1Q99519 415 aa10.25□□□□□ -0.77
VPS25-201ENST00000253794 RARRES2Q99969 163 aa10.25□□□□□ -0.77
VPS25-201ENST00000253794 ZMAT4Q9H898 229 aa10.25□□□□□ -0.77
VPS25-201ENST00000253794 LTAP01374 205 aa10.24□□□□□ -0.77
VPS25-201ENST00000253794 RBMY1A1P0DJD3 496 aaKnown RBP10.24□□□□□ -0.77
VPS25-201ENST00000253794 RBMY1CP0DJD4 496 aa10.24□□□□□ -0.77
VPS25-201ENST00000253794 AKR1C3P42330 323 aa10.24□□□□□ -0.77
VPS25-201ENST00000253794 KIR3DS1Q14943 382 aa10.24□□□□□ -0.77
VPS25-201ENST00000253794 RBMY1FQ15415 496 aaKnown RBP10.24□□□□□ -0.77
VPS25-201ENST00000253794 Q6AWC8 147 aa10.24□□□□□ -0.77
VPS25-201ENST00000253794 TMEM256Q8N2U0 113 aa10.24□□□□□ -0.77
VPS25-201ENST00000253794 NDFIP1Q9BT67 221 aa10.24□□□□□ -0.77
VPS25-201ENST00000253794 SMDT1Q9H4I9 107 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms