RNA–Protein interactions for RNA: ENST00000245544.8

NUP85-201, Transcript of nucleoporin 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP85, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-201ENST00000245544 UBE2CO00762 179 aa10.18□□□□□ -0.78
NUP85-201ENST00000245544 SOCS3O14543 225 aa10.18□□□□□ -0.78
NUP85-201ENST00000245544 ZNF705DP0CH99 300 aaPredicted RBP10.18□□□□□ -0.78
NUP85-201ENST00000245544 ZNF705BP0CI00 300 aaPredicted RBP10.18□□□□□ -0.78
NUP85-201ENST00000245544 SYNJ2BPP57105 145 aa10.18□□□□□ -0.78
NUP85-201ENST00000245544 IZUMO1RA6ND01 250 aa10.17□□□□□ -0.78
NUP85-201ENST00000245544 LY6G6DO95868 133 aa10.17□□□□□ -0.78
NUP85-201ENST00000245544 HOXD3P31249 432 aaPredicted RBP10.17□□□□□ -0.78
NUP85-201ENST00000245544 ZNF80P51504 273 aaPredicted RBP10.17□□□□□ -0.78
NUP85-201ENST00000245544 SMUG1Q53HV7 270 aa10.17□□□□□ -0.78
NUP85-201ENST00000245544 OR2D3Q8NGH3 330 aa10.17□□□□□ -0.78
NUP85-201ENST00000245544 MEOX2P50222 304 aa10.16□□□□□ -0.78
NUP85-201ENST00000245544 AKR1D1P51857 326 aa10.16□□□□□ -0.78
NUP85-201ENST00000245544 PRR31Q5SQ13 230 aa10.16□□□□□ -0.78
NUP85-201ENST00000245544 DUX3Q96PT4 197 aa10.16□□□□□ -0.78
NUP85-201ENST00000245544 AGPAT4-IT1Q9H0P7 198 aa10.16□□□□□ -0.78
NUP85-201ENST00000245544 NAT8BQ9UHF3 227 aa10.16□□□□□ -0.78
NUP85-201ENST00000245544 SNURFLB1AK76 121 aa10.16□□□□□ -0.78
NUP85-201ENST00000245544 TMEM136Q6ZRR5 245 aa10.16□□□□□ -0.78
NUP85-201ENST00000245544 MRPL18Q9H0U6 180 aaKnown RBP10.16□□□□□ -0.78
NUP85-201ENST00000245544 NRN1Q9NPD7 142 aa10.16□□□□□ -0.78
NUP85-201ENST00000245544 UFC1Q9Y3C8 167 aa10.16□□□□□ -0.78
NUP85-201ENST00000245544 NIPBLQ6KC79 2804 aaeCLIP10.15□□□□□ -0.78
NUP85-201ENST00000245544 IFITM10A6NMD0 228 aa10.15□□□□□ -0.78
NUP85-201ENST00000245544 HOXA5P20719 270 aa10.15□□□□□ -0.78
NUP85-201ENST00000245544 SLURP1P55000 103 aa10.15□□□□□ -0.78
NUP85-201ENST00000245544 CT83Q5H943 113 aa10.15□□□□□ -0.78
NUP85-201ENST00000245544 GDF5OSQ5U4N7 250 aa10.15□□□□□ -0.78
NUP85-201ENST00000245544 C11orf44Q8N8P7 122 aa10.15□□□□□ -0.78
NUP85-201ENST00000245544 PGLYRP4Q96LB8 373 aa10.15□□□□□ -0.78
NUP85-201ENST00000245544 SORL1Q92673 2214 aa10.15□□□□□ -0.78
NUP85-201ENST00000245544 A0A1B0GUS0 222 aa10.15□□□□□ -0.79
NUP85-201ENST00000245544 A8MWL6 223 aa10.15□□□□□ -0.79
NUP85-201ENST00000245544 SH2D1AO60880 128 aa10.15□□□□□ -0.79
NUP85-201ENST00000245544 CDX1P47902 265 aaPredicted RBP10.15□□□□□ -0.79
NUP85-201ENST00000245544 PDZD11Q5EBL8 140 aa10.15□□□□□ -0.79
NUP85-201ENST00000245544 KHDC1LQ5JSQ8 128 aa10.15□□□□□ -0.79
NUP85-201ENST00000245544 SAPCD1Q5SSQ6 148 aa10.15□□□□□ -0.79
NUP85-201ENST00000245544 COX8CQ7Z4L0 72 aa10.15□□□□□ -0.79
NUP85-201ENST00000245544 WNK1Q9H4A3 2382 aa10.14□□□□□ -0.79
NUP85-201ENST00000245544 TMSB15BA0A087X1C1 80 aa10.14□□□□□ -0.79
NUP85-201ENST00000245544 RBAKDNA6NC62 111 aa10.14□□□□□ -0.79
NUP85-201ENST00000245544 RNASE1P07998 156 aaKnown RBP10.14□□□□□ -0.79
NUP85-201ENST00000245544 CT45A10P0DMU9 189 aa10.14□□□□□ -0.79
NUP85-201ENST00000245544 RAB4BP61018 213 aa10.14□□□□□ -0.79
NUP85-201ENST00000245544 WIPF2Q8TF74 440 aaPredicted RBP10.14□□□□□ -0.79
NUP85-201ENST00000245544 MRPL53Q96EL3 112 aaKnown RBP10.14□□□□□ -0.79
NUP85-201ENST00000245544 GNB1LQ9BYB4 327 aa10.14□□□□□ -0.79
NUP85-201ENST00000245544 FAM162BQ5T6X4 162 aa10.13□□□□□ -0.79
NUP85-201ENST00000245544 ADAMTSL5Q6ZMM2 481 aa10.13□□□□□ -0.79
NUP85-201ENST00000245544 REC114Q7Z4M0 266 aa10.13□□□□□ -0.79
NUP85-201ENST00000245544 WFDC3Q8IUB2 231 aa10.13□□□□□ -0.79
NUP85-201ENST00000245544 ZNF738Q8NE65 137 aa10.13□□□□□ -0.79
NUP85-201ENST00000245544 OR11H1Q8NG94 326 aa10.13□□□□□ -0.79
NUP85-201ENST00000245544 OR4B1Q8NGF8 309 aa10.13□□□□□ -0.79
NUP85-201ENST00000245544 TMEM160Q9NX00 188 aa10.13□□□□□ -0.79
NUP85-201ENST00000245544 XKRY2A2RUG3 117 aa10.13□□□□□ -0.79
NUP85-201ENST00000245544 A8MWP6 167 aa10.13□□□□□ -0.79
NUP85-201ENST00000245544 F6UB75 175 aa10.13□□□□□ -0.79
NUP85-201ENST00000245544 KLF5Q13887 457 aaPredicted RBP10.13□□□□□ -0.79
NUP85-201ENST00000245544 KIAA1644Q3SXP7 199 aa10.13□□□□□ -0.79
NUP85-201ENST00000245544 Q6ZQT7 251 aa10.13□□□□□ -0.79
NUP85-201ENST00000245544 ZNF575Q86XF7 245 aa10.13□□□□□ -0.79
NUP85-201ENST00000245544 FN1P02751 2386 aaKnown RBP10.13□□□□□ -0.79
NUP85-201ENST00000245544 FBLL1A6NHQ2 334 aaKnown RBP10.12□□□□□ -0.79
NUP85-201ENST00000245544 CAMPP49913 170 aa10.12□□□□□ -0.79
NUP85-201ENST00000245544 DCANP1Q8TF63 244 aa10.12□□□□□ -0.79
NUP85-201ENST00000245544 A0A1B0GXF2 115 aa10.12□□□□□ -0.79
NUP85-201ENST00000245544 GRIFINA4D1Z8 144 aa10.12□□□□□ -0.79
NUP85-201ENST00000245544 C2orf70A6NJV1 201 aa10.12□□□□□ -0.79
NUP85-201ENST00000245544 LGALS9O00182 355 aa10.12□□□□□ -0.79
NUP85-201ENST00000245544 TFPI2P48307 235 aa10.12□□□□□ -0.79
NUP85-201ENST00000245544 HILS1P60008 231 aa10.12□□□□□ -0.79
NUP85-201ENST00000245544 C9orf47Q6ZRZ4 202 aa10.12□□□□□ -0.79
NUP85-201ENST00000245544 HIST3H2BBQ8N257 126 aa10.12□□□□□ -0.79
NUP85-201ENST00000245544 KLHL30-AS1Q8NEE0 82 aa10.12□□□□□ -0.79
NUP85-201ENST00000245544 LINC01006Q8NI28 216 aa10.12□□□□□ -0.79
NUP85-201ENST00000245544 C4orf3Q8WVX3 66 aa10.12□□□□□ -0.79
NUP85-201ENST00000245544 SSBP4Q9BWG4 385 aaPredicted RBP10.12□□□□□ -0.79
NUP85-201ENST00000245544 GFRA4Q9GZZ7 299 aa10.12□□□□□ -0.79
NUP85-201ENST00000245544 LINC01619G3V211 115 aa10.11□□□□□ -0.79
NUP85-201ENST00000245544 CD28P10747 220 aa10.11□□□□□ -0.79
NUP85-201ENST00000245544 ZNF138P52744 262 aa10.11□□□□□ -0.79
NUP85-201ENST00000245544 SLAQ13239 276 aa10.11□□□□□ -0.79
NUP85-201ENST00000245544 TMEM78Q5T7P6 136 aa10.11□□□□□ -0.79
NUP85-201ENST00000245544 RBPMS2Q6ZRY4 209 aaKnown RBP10.11□□□□□ -0.79
NUP85-201ENST00000245544 ZNF418Q8TF45 676 aaPredicted RBP10.11□□□□□ -0.79
NUP85-201ENST00000245544 MS4A6AQ9H2W1 248 aa10.11□□□□□ -0.79
NUP85-201ENST00000245544 SRSF2Q01130 221 aaKnown RBP10.1□□□□□ -0.79
NUP85-201ENST00000245544 WDR73Q6P4I2 378 aa10.1□□□□□ -0.79
NUP85-201ENST00000245544 OR1N2Q8NGR9 330 aa10.1□□□□□ -0.79
NUP85-201ENST00000245544 NDFIP1Q9BT67 221 aa10.1□□□□□ -0.79
NUP85-201ENST00000245544 CLEC5AQ9NY25 188 aa10.1□□□□□ -0.79
NUP85-201ENST00000245544 TMEM189A5PLL7 270 aa10.1□□□□□ -0.79
NUP85-201ENST00000245544 FAM231BA6NCW3 169 aa10.1□□□□□ -0.79
NUP85-201ENST00000245544 FOXA3P55318 350 aaPredicted RBP10.1□□□□□ -0.79
NUP85-201ENST00000245544 PRR9Q5T870 116 aa10.1□□□□□ -0.79
NUP85-201ENST00000245544 TPPP3Q9BW30 176 aa10.1□□□□□ -0.79
NUP85-201ENST00000245544 A0A1W2PRX2 142 aa10.09□□□□□ -0.79
NUP85-201ENST00000245544 INAFM1C9JVW0 142 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms