RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 C9orf118A6NHY6 69 aa16.1■□□□□ 0.17
SNX3-201ENST00000230085 IGKV1-17P01599 117 aa16.1■□□□□ 0.17
SNX3-201ENST00000230085 CT45A10P0DMU9 189 aa16.1■□□□□ 0.17
SNX3-201ENST00000230085 ZNF138P52744 262 aa16.1■□□□□ 0.17
SNX3-201ENST00000230085 HSD52Q0P140 79 aa16.1■□□□□ 0.17
SNX3-201ENST00000230085 GTF2H5Q6ZYL4 71 aa16.1■□□□□ 0.17
SNX3-201ENST00000230085 PPP1R27Q86WC6 154 aa16.1■□□□□ 0.17
SNX3-201ENST00000230085 OR4X2Q8NGF9 303 aa16.1■□□□□ 0.17
SNX3-201ENST00000230085 LINC01546A6NGU7 62 aa16.09■□□□□ 0.17
SNX3-201ENST00000230085 LYPD2Q6UXB3 125 aa16.09■□□□□ 0.17
SNX3-201ENST00000230085 PRSS3P2Q8NHM4 247 aa16.09■□□□□ 0.17
SNX3-201ENST00000230085 CTSZQ9UBR2 303 aa16.09■□□□□ 0.17
SNX3-201ENST00000230085 MAST4O15021 2626 aa16.09■□□□□ 0.17
SNX3-201ENST00000230085 ZANQ9Y493 2812 aa16.09■□□□□ 0.17
SNX3-201ENST00000230085 ACANP16112 2415 aa16.08■□□□□ 0.17
SNX3-201ENST00000230085 LYZP61626 148 aa16.08■□□□□ 0.17
SNX3-201ENST00000230085 PIP4P2Q8N4L2 257 aa16.08■□□□□ 0.17
SNX3-201ENST00000230085 ZNF48Q96MX3 618 aaPredicted RBP16.08■□□□□ 0.17
SNX3-201ENST00000230085 RASL11BQ9BPW5 248 aa16.08■□□□□ 0.17
SNX3-201ENST00000230085 SMAD7O15105 426 aaKnown RBP16.08■□□□□ 0.16
SNX3-201ENST00000230085 CRIP1P50238 77 aa16.08■□□□□ 0.16
SNX3-201ENST00000230085 LMO4P61968 165 aa16.08■□□□□ 0.16
SNX3-201ENST00000230085 SRSF2Q01130 221 aaKnown RBP16.08■□□□□ 0.16
SNX3-201ENST00000230085 LOXL1Q08397 574 aaPredicted RBP16.08■□□□□ 0.16
SNX3-201ENST00000230085 FAM104BQ5XKR9 115 aa16.08■□□□□ 0.16
SNX3-201ENST00000230085 EXOC3-AS1Q8N2X6 119 aa16.08■□□□□ 0.16
SNX3-201ENST00000230085 CBY3A6NI87 242 aa16.07■□□□□ 0.16
SNX3-201ENST00000230085 LINC01559Q495D7 138 aa16.07■□□□□ 0.16
SNX3-201ENST00000230085 RNF151Q2KHN1 245 aa16.06■□□□□ 0.16
SNX3-201ENST00000230085 VPS25Q9BRG1 176 aa16.06■□□□□ 0.16
SNX3-201ENST00000230085 CSTL1Q9H114 145 aa16.06■□□□□ 0.16
SNX3-201ENST00000230085 SIGLEC8Q9NYZ4 499 aa16.06■□□□□ 0.16
SNX3-201ENST00000230085 ARHGAP32A7KAX9 2087 aa16.06■□□□□ 0.16
SNX3-201ENST00000230085 WI2-2373I1.2A0A1W2PRP0 233 aa16.05■□□□□ 0.16
SNX3-201ENST00000230085 NCR2O95944 276 aa16.05■□□□□ 0.16
SNX3-201ENST00000230085 ORMDL3Q8N138 153 aa16.05■□□□□ 0.16
SNX3-201ENST00000230085 MALRD1Q5VYJ5 2156 aa16.05■□□□□ 0.16
SNX3-201ENST00000230085 IGHV1-3A0A0C4DH29 117 aa16.05■□□□□ 0.16
SNX3-201ENST00000230085 HBDP02042 147 aa16.05■□□□□ 0.16
SNX3-201ENST00000230085 ADAMTSL5Q6ZMM2 481 aa16.05■□□□□ 0.16
SNX3-201ENST00000230085 ZNF414Q96IQ9 312 aa16.05■□□□□ 0.16
SNX3-201ENST00000230085 GAGE10A6NGK3 116 aa16.04■□□□□ 0.16
SNX3-201ENST00000230085 H3BTX0 84 aa16.04■□□□□ 0.16
SNX3-201ENST00000230085 K7EIM0 57 aa16.04■□□□□ 0.16
SNX3-201ENST00000230085 K7EP34 96 aa16.04■□□□□ 0.16
SNX3-201ENST00000230085 CSN3P07498 182 aa16.04■□□□□ 0.16
SNX3-201ENST00000230085 ABCA2Q9BZC7 2435 aa16.04■□□□□ 0.16
SNX3-201ENST00000230085 ABCA1O95477 2261 aa16.04■□□□□ 0.16
SNX3-201ENST00000230085 ENSAO43768 121 aaKnown RBP16.03■□□□□ 0.16
SNX3-201ENST00000230085 IFI27P40305 119 aaPredicted RBP16.03■□□□□ 0.16
SNX3-201ENST00000230085 ZNF491Q8N8L2 437 aa16.03■□□□□ 0.16
SNX3-201ENST00000230085 OR5A1Q8NGJ0 315 aa16.03■□□□□ 0.16
SNX3-201ENST00000230085 RABAC1Q9UI14 185 aa16.03■□□□□ 0.16
SNX3-201ENST00000230085 CSPG4Q6UVK1 2322 aa16.03■□□□□ 0.16
SNX3-201ENST00000230085 HIVEP1P15822 2718 aa16.03■□□□□ 0.16
SNX3-201ENST00000230085 PLGLAQ15195 96 aa16.03■□□□□ 0.16
SNX3-201ENST00000230085 PRELID3AQ96N28 172 aa16.03■□□□□ 0.16
SNX3-201ENST00000230085 HIGD1BQ9P298 99 aa16.03■□□□□ 0.16
SNX3-201ENST00000230085 BUB1B-PAK6H3BSN5 160 aa16.02■□□□□ 0.15
SNX3-201ENST00000230085 PRR31Q5SQ13 230 aa16.02■□□□□ 0.15
SNX3-201ENST00000230085 LHFPL4Q7Z7J7 247 aa16.02■□□□□ 0.15
SNX3-201ENST00000230085 CNFNQ9BYD5 112 aa16.02■□□□□ 0.15
SNX3-201ENST00000230085 LY6LH3BQJ8 138 aa16.01■□□□□ 0.15
SNX3-201ENST00000230085 PLXNB1O43157 2135 aa16.01■□□□□ 0.15
SNX3-201ENST00000230085 NEGR1Q7Z3B1 354 aa16.01■□□□□ 0.15
SNX3-201ENST00000230085 FER1L6-AS1Q8NA97 138 aa16.01■□□□□ 0.15
SNX3-201ENST00000230085 RNF125Q96EQ8 232 aa16.01■□□□□ 0.15
SNX3-201ENST00000230085 INSIG2Q9Y5U4 225 aa16.01■□□□□ 0.15
SNX3-201ENST00000230085 D6R8Y8 96 aa16■□□□□ 0.15
SNX3-201ENST00000230085 HLA-DRB4P13762 266 aa16■□□□□ 0.15
SNX3-201ENST00000230085 ZFP36P26651 326 aaKnown RBP16■□□□□ 0.15
SNX3-201ENST00000230085 CNTFRP26992 372 aa16■□□□□ 0.15
SNX3-201ENST00000230085 MCRIP2Q9BUT9 160 aaKnown RBP16■□□□□ 0.15
SNX3-201ENST00000230085 HLA-DRB4X5D2U9 266 aa16■□□□□ 0.15
SNX3-201ENST00000230085 SMIM17P0DL12 118 aa16■□□□□ 0.15
SNX3-201ENST00000230085 IGHV4-31P0DP07 118 aa16■□□□□ 0.15
SNX3-201ENST00000230085 Q71RC1 249 aaPredicted RBP16■□□□□ 0.15
SNX3-201ENST00000230085 ERASQ7Z444 233 aa16■□□□□ 0.15
SNX3-201ENST00000230085 WNK2Q9Y3S1 2297 aa15.99■□□□□ 0.15
SNX3-201ENST00000230085 TMEM189A5PLL7 270 aa15.99■□□□□ 0.15
SNX3-201ENST00000230085 LYZL1Q6UWQ5 148 aa15.99■□□□□ 0.15
SNX3-201ENST00000230085 AP1S3Q96PC3 154 aa15.99■□□□□ 0.15
SNX3-201ENST00000230085 SMR3AQ99954 134 aa15.99■□□□□ 0.15
SNX3-201ENST00000230085 ZMAT4Q9H898 229 aa15.99■□□□□ 0.15
SNX3-201ENST00000230085 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.99■□□□□ 0.153e-11■■■■■ 37.2
SNX3-201ENST00000230085 IGHV3-72A0A0B4J1Y9 119 aa15.98■□□□□ 0.15
SNX3-201ENST00000230085 G3V4G9 280 aa15.98■□□□□ 0.15
SNX3-201ENST00000230085 IGLC6P0CF74 106 aa15.98■□□□□ 0.15
SNX3-201ENST00000230085 FOXE3Q13461 319 aa15.98■□□□□ 0.15
SNX3-201ENST00000230085 MRPL51Q4U2R6 128 aaKnown RBP15.98■□□□□ 0.15
SNX3-201ENST00000230085 IFI27L1Q96BM0 104 aa15.98■□□□□ 0.15
SNX3-201ENST00000230085 AAMDCQ9H7C9 122 aa15.98■□□□□ 0.15
SNX3-201ENST00000230085 F8P00451 2351 aa15.98■□□□□ 0.15
SNX3-201ENST00000230085 IGHV3-21A0A0B4J1V1 117 aa15.97■□□□□ 0.15
SNX3-201ENST00000230085 B4DSR2 109 aa15.97■□□□□ 0.15
SNX3-201ENST00000230085 H0Y8G0 127 aa15.97■□□□□ 0.15
SNX3-201ENST00000230085 FAM106CPP0CH98 169 aa15.97■□□□□ 0.15
SNX3-201ENST00000230085 KIR3DS1Q14943 382 aa15.97■□□□□ 0.15
SNX3-201ENST00000230085 FAM106AQ4KMX7 169 aa15.97■□□□□ 0.15
SNX3-201ENST00000230085 OR2K2Q8NGT1 345 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms