RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 PIMREGQ9BSJ6 248 aa16.94■□□□□ 0.3
SMARCD2-201ENST00000225742 NPFFR1Q9GZQ6 430 aa16.94■□□□□ 0.3
SMARCD2-201ENST00000225742 MEGF9Q9H1U4 602 aa16.94■□□□□ 0.3
SMARCD2-201ENST00000225742 PPP1R14DQ9NXH3 145 aa16.94■□□□□ 0.3
SMARCD2-201ENST00000225742 GOLT1BQ9Y3E0 138 aa16.94■□□□□ 0.3
SMARCD2-201ENST00000225742 SLC25A34Q6PIV7 304 aa16.93■□□□□ 0.3
SMARCD2-201ENST00000225742 hDV102S1A0JD36 115 aa16.93■□□□□ 0.3
SMARCD2-201ENST00000225742 PRAC2D3DTV9 90 aa16.93■□□□□ 0.3
SMARCD2-201ENST00000225742 BRI3O95415 125 aa16.93■□□□□ 0.3
SMARCD2-201ENST00000225742 CKS2P33552 79 aa16.93■□□□□ 0.3
SMARCD2-201ENST00000225742 ERCC8Q13216 396 aa16.93■□□□□ 0.3
SMARCD2-201ENST00000225742 ZNF575Q86XF7 245 aa16.93■□□□□ 0.3
SMARCD2-201ENST00000225742 WNK2Q9Y3S1 2297 aa16.92■□□□□ 0.3
SMARCD2-201ENST00000225742 TFPI2P48307 235 aa16.92■□□□□ 0.3
SMARCD2-201ENST00000225742 SCRT2Q9NQ03 307 aa16.92■□□□□ 0.3
SMARCD2-201ENST00000225742 NDUFS8O00217 210 aa16.91■□□□□ 0.3
SMARCD2-201ENST00000225742 HINT1P49773 126 aaPredicted RBP16.91■□□□□ 0.3
SMARCD2-201ENST00000225742 DPF1Q92782 380 aa16.91■□□□□ 0.3
SMARCD2-201ENST00000225742 PMCHL2Q9BQD1 86 aa16.91■□□□□ 0.3
SMARCD2-201ENST00000225742 HIVEP3Q5T1R4 2406 aa16.91■□□□□ 0.3
SMARCD2-201ENST00000225742 TRAV8-2A0A0B4J237 113 aa16.91■□□□□ 0.3
SMARCD2-201ENST00000225742 ORAOV1Q8WV07 137 aa16.91■□□□□ 0.3
SMARCD2-201ENST00000225742 H3BUA1 57 aa16.9■□□□□ 0.3
SMARCD2-201ENST00000225742 TMEM78Q5T7P6 136 aa16.9■□□□□ 0.3
SMARCD2-201ENST00000225742 C9orf47Q6ZRZ4 202 aa16.9■□□□□ 0.3
SMARCD2-201ENST00000225742 RNF182Q8N6D2 247 aa16.9■□□□□ 0.3
SMARCD2-201ENST00000225742 PIFOQ8TCI5 191 aa16.9■□□□□ 0.3
SMARCD2-201ENST00000225742 AGPAT4-IT1Q9H0P7 198 aa16.9■□□□□ 0.3
SMARCD2-201ENST00000225742 DCHS1Q96JQ0 3298 aa16.89■□□□□ 0.29
SMARCD2-201ENST00000225742 A0A096LNJ9 63 aa16.89■□□□□ 0.29
SMARCD2-201ENST00000225742 LOC389332A0A1B0GUA5 103 aa16.89■□□□□ 0.29
SMARCD2-201ENST00000225742 LINC01546A6NGU7 62 aa16.89■□□□□ 0.29
SMARCD2-201ENST00000225742 HBDP02042 147 aa16.89■□□□□ 0.29
SMARCD2-201ENST00000225742 C8orf86Q6ZUL3 223 aa16.89■□□□□ 0.29
SMARCD2-201ENST00000225742 IL17RELQ6ZVW7 336 aa16.89■□□□□ 0.29
SMARCD2-201ENST00000225742 COL6A6A6NMZ7 2263 aa16.89■□□□□ 0.29
SMARCD2-201ENST00000225742 ATRXP46100 2492 aa16.89■□□□□ 0.29
SMARCD2-201ENST00000225742 NBASA2RRP1 2371 aa16.89■□□□□ 0.29
SMARCD2-201ENST00000225742 LGALS9BQ3B8N2 356 aa16.89■□□□□ 0.29
SMARCD2-201ENST00000225742 LGALS9CQ6DKI2 356 aa16.89■□□□□ 0.29
SMARCD2-201ENST00000225742 LRBAP50851 2863 aa16.89■□□□□ 0.29
SMARCD2-201ENST00000225742 TCF21O43680 179 aa16.88■□□□□ 0.29
SMARCD2-201ENST00000225742 IGF1P05019 195 aa16.88■□□□□ 0.29
SMARCD2-201ENST00000225742 TMEM219Q86XT9 240 aa16.88■□□□□ 0.29
SMARCD2-201ENST00000225742 C10orf105Q8TEF2 133 aa16.88■□□□□ 0.29
SMARCD2-201ENST00000225742 RNF185Q96GF1 192 aa16.88■□□□□ 0.29
SMARCD2-201ENST00000225742 IGHV3-66A0A0C4DH42 116 aa16.87■□□□□ 0.29
SMARCD2-201ENST00000225742 NPYP01303 97 aa16.87■□□□□ 0.29
SMARCD2-201ENST00000225742 TRGV3P03979 118 aa16.87■□□□□ 0.29
SMARCD2-201ENST00000225742 MAP1LC3AQ9H492 121 aa16.87■□□□□ 0.29
SMARCD2-201ENST00000225742 TIMM8BQ9Y5J9 83 aaPredicted RBP16.87■□□□□ 0.29
SMARCD2-201ENST00000225742 LENEPQ9Y5L5 61 aa16.87■□□□□ 0.29
SMARCD2-201ENST00000225742 DCHS2Q6V1P9 2916 aa16.87■□□□□ 0.29
SMARCD2-201ENST00000225742 MUC21A0A0G2JKD1 596 aa16.86■□□□□ 0.29
SMARCD2-201ENST00000225742 MUC21A0A140T8X8 626 aa16.86■□□□□ 0.29
SMARCD2-201ENST00000225742 FAM106AQ4KMX7 169 aa16.86■□□□□ 0.29
SMARCD2-201ENST00000225742 MUC21Q5SSG8 566 aa16.86■□□□□ 0.29
SMARCD2-201ENST00000225742 C9orf139Q6ZV77 190 aa16.86■□□□□ 0.29
SMARCD2-201ENST00000225742 H0Y8G0 127 aa16.86■□□□□ 0.29
SMARCD2-201ENST00000225742 ARL3P36405 182 aa16.86■□□□□ 0.29
SMARCD2-201ENST00000225742 LOXL1Q08397 574 aaPredicted RBP16.86■□□□□ 0.29
SMARCD2-201ENST00000225742 GLMPQ8WWB7 406 aa16.86■□□□□ 0.29
SMARCD2-201ENST00000225742 USMG5Q96IX5 58 aa16.86■□□□□ 0.29
SMARCD2-201ENST00000225742 CCL19Q99731 98 aa16.86■□□□□ 0.29
SMARCD2-201ENST00000225742 IGHV4-61A0A0C4DH41 118 aa16.85■□□□□ 0.29
SMARCD2-201ENST00000225742 NDUFA4O00483 81 aa16.85■□□□□ 0.29
SMARCD2-201ENST00000225742 OR1N2Q8NGR9 330 aa16.85■□□□□ 0.29
SMARCD2-201ENST00000225742 SPTBN1Q01082 2364 aaKnown RBP16.85■□□□□ 0.29
SMARCD2-201ENST00000225742 NPSP0C0P6 89 aa16.84■□□□□ 0.29
SMARCD2-201ENST00000225742 COX8AP10176 69 aa16.84■□□□□ 0.29
SMARCD2-201ENST00000225742 C12orf54Q6X4T0 127 aa16.84■□□□□ 0.29
SMARCD2-201ENST00000225742 NXT2Q9NPJ8 142 aaKnown RBP16.84■□□□□ 0.29
SMARCD2-201ENST00000225742 TRAV40A0A0B4J280 105 aa16.84■□□□□ 0.29
SMARCD2-201ENST00000225742 IGKV3D-20A0A0C4DH25 116 aa16.84■□□□□ 0.29
SMARCD2-201ENST00000225742 ZNF207O43670 478 aaKnown RBP16.84■□□□□ 0.29
SMARCD2-201ENST00000225742 OR8A1Q8NGG7 326 aa16.84■□□□□ 0.29
SMARCD2-201ENST00000225742 IGHV3OR16-13A0A075B7E8 117 aa16.83■□□□□ 0.28
SMARCD2-201ENST00000225742 IGHV3OR16-10A0A075B7F0 116 aa16.83■□□□□ 0.28
SMARCD2-201ENST00000225742 IGHV3-74A0A0B4J1X5 117 aa16.83■□□□□ 0.28
SMARCD2-201ENST00000225742 NCR2O95944 276 aa16.83■□□□□ 0.28
SMARCD2-201ENST00000225742 CLEC2AQ6UVW9 174 aa16.83■□□□□ 0.28
SMARCD2-201ENST00000225742 ZNF738Q8NE65 137 aa16.83■□□□□ 0.28
SMARCD2-201ENST00000225742 C16orf92Q96LL3 132 aa16.83■□□□□ 0.28
SMARCD2-201ENST00000225742 MSRB1Q9NZV6 116 aa16.83■□□□□ 0.28
SMARCD2-201ENST00000225742 COX11Q9Y6N1 276 aa16.83■□□□□ 0.28
SMARCD2-201ENST00000225742 A6NDX4 124 aa16.82■□□□□ 0.28
SMARCD2-201ENST00000225742 SMKR1H3BMG3 65 aa16.82■□□□□ 0.28
SMARCD2-201ENST00000225742 IGHG2P01859 326 aa16.82■□□□□ 0.28
SMARCD2-201ENST00000225742 CACNG7P62955 275 aa16.82■□□□□ 0.28
SMARCD2-201ENST00000225742 MCRIP2Q9BUT9 160 aaKnown RBP16.82■□□□□ 0.28
SMARCD2-201ENST00000225742 IGHV4-4A0A075B6R2 117 aa16.82■□□□□ 0.28
SMARCD2-201ENST00000225742 IGHV3-49A0A0A0MS15 119 aa16.82■□□□□ 0.28
SMARCD2-201ENST00000225742 PRSS57Q6UWY2 283 aa16.82■□□□□ 0.28
SMARCD2-201ENST00000225742 SMIM15Q7Z3B0 74 aa16.82■□□□□ 0.28
SMARCD2-201ENST00000225742 IFI27L1Q96BM0 104 aa16.82■□□□□ 0.28
SMARCD2-201ENST00000225742 PSMG4Q5JS54 123 aa16.81■□□□□ 0.28
SMARCD2-201ENST00000225742 BRD3OSQ6XYD6 125 aa16.81■□□□□ 0.28
SMARCD2-201ENST00000225742 LINC00477Q96M19 166 aa16.81■□□□□ 0.28
SMARCD2-201ENST00000225742 OVOL1O14753 267 aa16.8■□□□□ 0.28
SMARCD2-201ENST00000225742 TNFRSF6BO95407 300 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms