RNA–Protein interactions for RNA: ENST00000222690.10

H2AFV-201, Transcript of H2A histone family member V, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene H2AFV, Length 3,804 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-201ENST00000222690 PIP4P2Q8N4L2 257 aa13.45□□□□□ -0.26
H2AFV-201ENST00000222690 RNF182Q8N6D2 247 aa13.45□□□□□ -0.26
H2AFV-201ENST00000222690 OR2K2Q8NGT1 345 aa13.45□□□□□ -0.26
H2AFV-201ENST00000222690 NDUFS7O75251 213 aa13.45□□□□□ -0.26
H2AFV-201ENST00000222690 CEACAM3P40198 252 aa13.45□□□□□ -0.26
H2AFV-201ENST00000222690 C5orf64Q2M2E5 130 aa13.45□□□□□ -0.26
H2AFV-201ENST00000222690 LGALS9BQ3B8N2 356 aa13.45□□□□□ -0.26
H2AFV-201ENST00000222690 LGALS9CQ6DKI2 356 aa13.45□□□□□ -0.26
H2AFV-201ENST00000222690 ZNF207O43670 478 aaKnown RBP13.44□□□□□ -0.26
H2AFV-201ENST00000222690 BMI1P35226 326 aa13.44□□□□□ -0.26
H2AFV-201ENST00000222690 RPL24P83731 157 aaKnown RBP13.44□□□□□ -0.26
H2AFV-201ENST00000222690 NDPQ00604 133 aa13.44□□□□□ -0.26
H2AFV-201ENST00000222690 SPCS1Q9Y6A9 102 aa13.44□□□□□ -0.26
H2AFV-201ENST00000222690 HSD52Q0P140 79 aa13.44□□□□□ -0.26
H2AFV-201ENST00000222690 FANCD2OSQ96PS1 177 aa13.44□□□□□ -0.26
H2AFV-201ENST00000222690 FGF6P10767 208 aa13.43□□□□□ -0.26
H2AFV-201ENST00000222690 FCER1GP30273 86 aa13.43□□□□□ -0.26
H2AFV-201ENST00000222690 C9orf118A6NHY6 69 aa13.43□□□□□ -0.26
H2AFV-201ENST00000222690 ZNF493Q6ZR52 646 aa13.43□□□□□ -0.26
H2AFV-201ENST00000222690 GTSCR1Q86UQ5 136 aa13.43□□□□□ -0.26
H2AFV-201ENST00000222690 FOXC2Q99958 501 aa13.43□□□□□ -0.26
H2AFV-201ENST00000222690 MRPS12O15235 138 aaKnown RBP13.43□□□□□ -0.26
H2AFV-201ENST00000222690 WI2-2373I1.2A0A1W2PRP0 233 aa13.42□□□□□ -0.26
H2AFV-201ENST00000222690 BOD1L2Q8IYS8 172 aa13.42□□□□□ -0.26
H2AFV-201ENST00000222690 TMEM160Q9NX00 188 aa13.42□□□□□ -0.26
H2AFV-201ENST00000222690 PDE6HQ13956 83 aa13.42□□□□□ -0.26
H2AFV-201ENST00000222690 COL25A1Q9BXS0 654 aaPredicted RBP13.42□□□□□ -0.26
H2AFV-201ENST00000222690 TRBV6-1A0A0K0K1D8 114 aa13.42□□□□□ -0.26
H2AFV-201ENST00000222690 TIMD4Q96H15 378 aa13.42□□□□□ -0.26
H2AFV-201ENST00000222690 Q8NA96 180 aa13.41□□□□□ -0.26
H2AFV-201ENST00000222690 K7ERJ3 54 aa13.41□□□□□ -0.26
H2AFV-201ENST00000222690 PPBPP02775 128 aa13.41□□□□□ -0.26
H2AFV-201ENST00000222690 H3BRM9 83 aa13.41□□□□□ -0.26
H2AFV-201ENST00000222690 OR1N2Q8NGR9 330 aa13.41□□□□□ -0.26
H2AFV-201ENST00000222690 RNF5Q99942 180 aa13.41□□□□□ -0.26
H2AFV-201ENST00000222690 PRAC2D3DTV9 90 aa13.4□□□□□ -0.26
H2AFV-201ENST00000222690 OR9G4Q8NGQ1 327 aa13.4□□□□□ -0.26
H2AFV-201ENST00000222690 SCGB2A1O75556 95 aa13.4□□□□□ -0.26
H2AFV-201ENST00000222690 DYNAPQ8N1N2 210 aa13.4□□□□□ -0.26
H2AFV-201ENST00000222690 TRAV26-2A0A0B4J265 109 aa13.4□□□□□ -0.26
H2AFV-201ENST00000222690 FABP5P3A8MUU1 101 aa13.4□□□□□ -0.26
H2AFV-201ENST00000222690 FABP2P12104 132 aa13.4□□□□□ -0.26
H2AFV-201ENST00000222690 PAX2Q02962 417 aa13.4□□□□□ -0.26
H2AFV-201ENST00000222690 KLK15Q9H2R5 256 aa13.4□□□□□ -0.26
H2AFV-201ENST00000222690 IGLV11-55A0A075B6I3 123 aa13.39□□□□□ -0.27
H2AFV-201ENST00000222690 TNFRSF6BO95407 300 aa13.39□□□□□ -0.27
H2AFV-201ENST00000222690 TMEM158Q8WZ71 300 aa13.39□□□□□ -0.27
H2AFV-201ENST00000222690 IGKV2D-26A0A0A0MRZ7 120 aa13.39□□□□□ -0.27
H2AFV-201ENST00000222690 LY6LH3BQJ8 138 aa13.39□□□□□ -0.27
H2AFV-201ENST00000222690 IL17RELQ6ZVW7 336 aa13.39□□□□□ -0.27
H2AFV-201ENST00000222690 OR4X2Q8NGF9 303 aa13.39□□□□□ -0.27
H2AFV-201ENST00000222690 NHP2Q9NX24 153 aaKnown RBP13.39□□□□□ -0.27
H2AFV-201ENST00000222690 RPS20P60866 119 aaKnown RBP13.39□□□□□ -0.27
H2AFV-201ENST00000222690 JKAMPQ9P055 326 aa13.39□□□□□ -0.27
H2AFV-201ENST00000222690 ZC2HC1BQ5TFG8 222 aa13.38□□□□□ -0.27
H2AFV-201ENST00000222690 MAP1AP78559 2803 aaPredicted RBP13.38□□□□□ -0.27
H2AFV-201ENST00000222690 ZNF562Q6V9R5 426 aa13.38□□□□□ -0.27
H2AFV-201ENST00000222690 ARL6IP6Q8N6S5 226 aa13.38□□□□□ -0.27
H2AFV-201ENST00000222690 SRSF8Q9BRL6 282 aaKnown RBP13.38□□□□□ -0.27
H2AFV-201ENST00000222690 CLEC3BP05452 202 aa13.38□□□□□ -0.27
H2AFV-201ENST00000222690 K7EP34 96 aa13.37□□□□□ -0.27
H2AFV-201ENST00000222690 CTSGP08311 255 aa13.37□□□□□ -0.27
H2AFV-201ENST00000222690 C15orf32Q32M92 178 aa13.37□□□□□ -0.27
H2AFV-201ENST00000222690 SMIM13P0DJ93 91 aa13.37□□□□□ -0.27
H2AFV-201ENST00000222690 FXYD2P54710 66 aa13.37□□□□□ -0.27
H2AFV-201ENST00000222690 CFHR4Q92496 578 aa13.37□□□□□ -0.27
H2AFV-201ENST00000222690 SPRY2O43597 315 aa13.37□□□□□ -0.27
H2AFV-201ENST00000222690 SAMD5Q5TGI4 173 aa13.37□□□□□ -0.27
H2AFV-201ENST00000222690 HIF1ANQ9NWT6 349 aa13.37□□□□□ -0.27
H2AFV-201ENST00000222690 SMAD5-AS1Q9Y6J3 95 aa13.37□□□□□ -0.27
H2AFV-201ENST00000222690 F8W735 103 aaPredicted RBP13.36□□□□□ -0.27
H2AFV-201ENST00000222690 U3KQK5 164 aa13.36□□□□□ -0.27
H2AFV-201ENST00000222690 ADAMTSL5Q6ZMM2 481 aa13.36□□□□□ -0.27
H2AFV-201ENST00000222690 SPG11Q96JI7 2443 aa13.36□□□□□ -0.27
H2AFV-201ENST00000222690 IGKCP01834 107 aa13.36□□□□□ -0.27
H2AFV-201ENST00000222690 SPANXN1Q5VSR9 72 aa13.36□□□□□ -0.27
H2AFV-201ENST00000222690 CLEC19AQ6UXS0 136 aa13.36□□□□□ -0.27
H2AFV-201ENST00000222690 GATD1Q8NB37 220 aa13.36□□□□□ -0.27
H2AFV-201ENST00000222690 CSTL1Q9H114 145 aa13.36□□□□□ -0.27
H2AFV-201ENST00000222690 TRAV40A0A0B4J280 105 aa13.35□□□□□ -0.27
H2AFV-201ENST00000222690 A0A1W2PPM0 123 aa13.35□□□□□ -0.27
H2AFV-201ENST00000222690 DTX2Q86UW9 622 aa13.35□□□□□ -0.27
H2AFV-201ENST00000222690 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.35□□□□□ -0.272e-6■■■■□ 24
H2AFV-201ENST00000222690 VMO1Q7Z5L0 202 aa13.35□□□□□ -0.27
H2AFV-201ENST00000222690 TMEM8BA6NDV4 472 aa13.35□□□□□ -0.27
H2AFV-201ENST00000222690 TRGV3P03979 118 aa13.35□□□□□ -0.27
H2AFV-201ENST00000222690 CHAC1Q9BUX1 264 aa13.35□□□□□ -0.27
H2AFV-201ENST00000222690 NDUFA3O95167 84 aa13.34□□□□□ -0.27
H2AFV-201ENST00000222690 IGF2-ASQ6U949 168 aa13.34□□□□□ -0.27
H2AFV-201ENST00000222690 RNF185Q96GF1 192 aa13.34□□□□□ -0.27
H2AFV-201ENST00000222690 CCL21O00585 134 aa13.34□□□□□ -0.27
H2AFV-201ENST00000222690 FOXC1Q12948 553 aa13.34□□□□□ -0.27
H2AFV-201ENST00000222690 BSNQ9UPA5 3926 aa13.33□□□□□ -0.27
H2AFV-201ENST00000222690 IGLC6P0CF74 106 aa13.33□□□□□ -0.27
H2AFV-201ENST00000222690 MYOZ3Q8TDC0 251 aa13.33□□□□□ -0.27
H2AFV-201ENST00000222690 DEFB104AQ8WTQ1 72 aa13.33□□□□□ -0.27
H2AFV-201ENST00000222690 DPF1Q92782 380 aa13.33□□□□□ -0.27
H2AFV-201ENST00000222690 NXT2Q9NPJ8 142 aaKnown RBP13.33□□□□□ -0.27
H2AFV-201ENST00000222690 IGKV3-7A0A075B6H7 116 aa13.33□□□□□ -0.28
H2AFV-201ENST00000222690 SMIM17P0DL12 118 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms