RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 DAZ1Q9NQZ3 744 aaKnown RBP11.89□□□□□ -0.51
SPTLC2-201ENST00000216484 A0A0A6YYD4 124 aa11.89□□□□□ -0.51
SPTLC2-201ENST00000216484 TRAV26-2A0A0B4J265 109 aa11.89□□□□□ -0.51
SPTLC2-201ENST00000216484 APOC4P55056 127 aa11.89□□□□□ -0.51
SPTLC2-201ENST00000216484 DSCR9P59020 149 aa11.89□□□□□ -0.51
SPTLC2-201ENST00000216484 RNF183Q96D59 192 aa11.89□□□□□ -0.51
SPTLC2-201ENST00000216484 RHPN1-AS1Q9BWJ2 59 aa11.89□□□□□ -0.51
SPTLC2-201ENST00000216484 IGHV1-8P0DP01 117 aa11.89□□□□□ -0.51
SPTLC2-201ENST00000216484 SP7Q8TDD2 431 aaPredicted RBP11.89□□□□□ -0.51
SPTLC2-201ENST00000216484 PSPNO60542 156 aa11.89□□□□□ -0.51
SPTLC2-201ENST00000216484 XCL1P47992 114 aa11.89□□□□□ -0.51
SPTLC2-201ENST00000216484 LYPD1Q8N2G4 141 aa11.89□□□□□ -0.51
SPTLC2-201ENST00000216484 ZMAT4Q9H898 229 aa11.89□□□□□ -0.51
SPTLC2-201ENST00000216484 IGHV1-18A0A0C4DH31 117 aa11.88□□□□□ -0.51
SPTLC2-201ENST00000216484 NDUFB1O75438 58 aa11.88□□□□□ -0.51
SPTLC2-201ENST00000216484 PYY3Q5JQD4 70 aa11.88□□□□□ -0.51
SPTLC2-201ENST00000216484 BUB3O43684 328 aa11.88□□□□□ -0.51
SPTLC2-201ENST00000216484 BAALC-AS2P0C853 105 aa11.88□□□□□ -0.51
SPTLC2-201ENST00000216484 IGKV2D-24A0A075B6R9 120 aa11.88□□□□□ -0.51
SPTLC2-201ENST00000216484 PTPN13Q12923 2485 aa11.88□□□□□ -0.51
SPTLC2-201ENST00000216484 MINOS1Q5TGZ0 78 aa11.88□□□□□ -0.51
SPTLC2-201ENST00000216484 COLQQ9Y215 455 aaPredicted RBP11.88□□□□□ -0.51
SPTLC2-201ENST00000216484 RFNGQ9Y644 331 aa11.88□□□□□ -0.51
SPTLC2-201ENST00000216484 MINOS1-NBL1R4GNA1 71 aa11.88□□□□□ -0.51
SPTLC2-201ENST00000216484 A0A1B0GX51 115 aa11.88□□□□□ -0.51
SPTLC2-201ENST00000216484 IGKV1-39P01597 117 aa11.88□□□□□ -0.51
SPTLC2-201ENST00000216484 IGKV1D-39P04432 117 aa11.88□□□□□ -0.51
SPTLC2-201ENST00000216484 FBLN5Q9UBX5 448 aa11.88□□□□□ -0.51
SPTLC2-201ENST00000216484 ADAMTSL3P82987 1691 aa11.88□□□□□ -0.51
SPTLC2-201ENST00000216484 ZNRF2Q8NHG8 242 aa11.88□□□□□ -0.51
SPTLC2-201ENST00000216484 NDUFA12Q9UI09 145 aa11.88□□□□□ -0.51
SPTLC2-201ENST00000216484 MBD3L4A6NDZ8 208 aaPredicted RBP11.87□□□□□ -0.51
SPTLC2-201ENST00000216484 MBD3L3A6NE82 208 aaPredicted RBP11.87□□□□□ -0.51
SPTLC2-201ENST00000216484 MBD3L5A6NJ08 208 aaPredicted RBP11.87□□□□□ -0.51
SPTLC2-201ENST00000216484 MBD3L2Q8NHZ7 208 aaPredicted RBP11.87□□□□□ -0.51
SPTLC2-201ENST00000216484 BUB1B-PAK6H3BSN5 160 aa11.87□□□□□ -0.51
SPTLC2-201ENST00000216484 C5orf64Q2M2E5 130 aa11.87□□□□□ -0.51
SPTLC2-201ENST00000216484 SMIM10L1P0DMW3 83 aa11.87□□□□□ -0.51
SPTLC2-201ENST00000216484 SMIM10Q96HG1 83 aa11.87□□□□□ -0.51
SPTLC2-201ENST00000216484 ACYP1P07311 99 aa11.87□□□□□ -0.51
SPTLC2-201ENST00000216484 LINC00479Q96M42 142 aa11.87□□□□□ -0.51
SPTLC2-201ENST00000216484 TMEM75Q8N9X5 138 aa11.87□□□□□ -0.51
SPTLC2-201ENST00000216484 OR11H6Q8NGC7 330 aa11.87□□□□□ -0.51
SPTLC2-201ENST00000216484 TRAV3A0A0B4J244 114 aa11.87□□□□□ -0.51
SPTLC2-201ENST00000216484 Q9HAA7 133 aa11.87□□□□□ -0.51
SPTLC2-201ENST00000216484 ZNF672Q499Z4 452 aaPredicted RBP11.86□□□□□ -0.51
SPTLC2-201ENST00000216484 MUSTN1Q8IVN3 82 aa11.86□□□□□ -0.51
SPTLC2-201ENST00000216484 LYZL4Q96KX0 146 aa11.86□□□□□ -0.51
SPTLC2-201ENST00000216484 GFRA4Q9GZZ7 299 aa11.86□□□□□ -0.51
SPTLC2-201ENST00000216484 A0A1B0GTI1 187 aa11.86□□□□□ -0.51
SPTLC2-201ENST00000216484 IGHV1-46P01743 117 aa11.86□□□□□ -0.51
SPTLC2-201ENST00000216484 LY6G6FQ5SQ64 297 aa11.86□□□□□ -0.51
SPTLC2-201ENST00000216484 IGFBPL1Q8WX77 278 aa11.86□□□□□ -0.51
SPTLC2-201ENST00000216484 WDR83OSQ9Y284 106 aa11.86□□□□□ -0.51
SPTLC2-201ENST00000216484 SHISA3A0PJX4 238 aa11.86□□□□□ -0.51
SPTLC2-201ENST00000216484 TANC1Q9C0D5 1861 aa11.86□□□□□ -0.51
SPTLC2-201ENST00000216484 PRDM6Q9NQX0 595 aa11.86□□□□□ -0.51
SPTLC2-201ENST00000216484 ZSWIM8A7E2V4 1837 aa11.85□□□□□ -0.51
SPTLC2-201ENST00000216484 C2orf66Q6UXQ4 117 aa11.85□□□□□ -0.51
SPTLC2-201ENST00000216484 TMEM213A2RRL7 107 aa11.85□□□□□ -0.51
SPTLC2-201ENST00000216484 BVES-AS1Q5T3Y7 98 aa11.85□□□□□ -0.51
SPTLC2-201ENST00000216484 IGLC2P0DOY2 106 aa11.85□□□□□ -0.51
SPTLC2-201ENST00000216484 IGLC3P0DOY3 106 aa11.85□□□□□ -0.51
SPTLC2-201ENST00000216484 NTF4P34130 210 aa11.85□□□□□ -0.51
SPTLC2-201ENST00000216484 NMSQ5H8A3 153 aa11.85□□□□□ -0.51
SPTLC2-201ENST00000216484 POLR3KQ9Y2Y1 108 aaPredicted RBP11.85□□□□□ -0.51
SPTLC2-201ENST00000216484 H0YIZ8 118 aa11.85□□□□□ -0.51
SPTLC2-201ENST00000216484 NPSP0C0P6 89 aa11.85□□□□□ -0.51
SPTLC2-201ENST00000216484 H0YJW9 148 aa11.85□□□□□ -0.51
SPTLC2-201ENST00000216484 K7EP34 96 aa11.85□□□□□ -0.51
SPTLC2-201ENST00000216484 M0R1W7 72 aa11.85□□□□□ -0.51
SPTLC2-201ENST00000216484 IFI6P09912 130 aa11.85□□□□□ -0.51
SPTLC2-201ENST00000216484 SPRR3Q9UBC9 169 aa11.85□□□□□ -0.51
SPTLC2-201ENST00000216484 PTPRBP23467 1997 aa11.85□□□□□ -0.51
SPTLC2-201ENST00000216484 IGKV1OR2-108A0A075B7D4 117 aa11.85□□□□□ -0.51
SPTLC2-201ENST00000216484 HERVK_113P63121 156 aa11.85□□□□□ -0.51
SPTLC2-201ENST00000216484 PAX9P55771 341 aa11.84□□□□□ -0.51
SPTLC2-201ENST00000216484 RPP25LQ8N5L8 163 aaKnown RBP11.84□□□□□ -0.51
SPTLC2-201ENST00000216484 CREBBPQ92793 2442 aa11.84□□□□□ -0.51
SPTLC2-201ENST00000216484 A0A0G2JMZ2 1700 aa11.84□□□□□ -0.51
SPTLC2-201ENST00000216484 LRRC37A2A6NM11 1700 aa11.84□□□□□ -0.51
SPTLC2-201ENST00000216484 LRRC37AA6NMS7 1700 aa11.84□□□□□ -0.51
SPTLC2-201ENST00000216484 B4DSR2 109 aa11.84□□□□□ -0.51
SPTLC2-201ENST00000216484 MRPL14Q6P1L8 145 aaKnown RBP11.84□□□□□ -0.51
SPTLC2-201ENST00000216484 SMIM20Q8N5G0 67 aa11.84□□□□□ -0.51
SPTLC2-201ENST00000216484 IGHV1-24A0A0C4DH33 117 aa11.84□□□□□ -0.51
SPTLC2-201ENST00000216484 SIGLEC9Q9Y336 463 aa11.84□□□□□ -0.51
SPTLC2-201ENST00000216484 PLXNA4Q9HCM2 1894 aa11.83□□□□□ -0.51
SPTLC2-201ENST00000216484 ETDCA0A1B0GVM5 59 aa11.83□□□□□ -0.51
SPTLC2-201ENST00000216484 TRAV1-1A0A0B4J248 108 aa11.83□□□□□ -0.52
SPTLC2-201ENST00000216484 WISP3O95389 354 aaPredicted RBP11.83□□□□□ -0.52
SPTLC2-201ENST00000216484 ZNF503Q96F45 646 aa11.83□□□□□ -0.52
SPTLC2-201ENST00000216484 BTCP35070 178 aa11.83□□□□□ -0.52
SPTLC2-201ENST00000216484 TMEM178BH3BS89 294 aa11.83□□□□□ -0.52
SPTLC2-201ENST00000216484 FGFBP3Q8TAT2 258 aa11.83□□□□□ -0.52
SPTLC2-201ENST00000216484 IGKV3D-7A0A0C4DH55 119 aa11.83□□□□□ -0.52
SPTLC2-201ENST00000216484 PSMB8P28062 276 aa11.83□□□□□ -0.52
SPTLC2-201ENST00000216484 HGFACQ04756 655 aa11.83□□□□□ -0.52
SPTLC2-201ENST00000216484 KLHDC3Q9BQ90 382 aa11.83□□□□□ -0.52
SPTLC2-201ENST00000216484 PDE6HQ13956 83 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms