RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 IGHV3OR16-8A0A075B7F1 116 aa16.91■□□□□ 0.3
HOXC8-201ENST00000040584 TRBV6-1A0A0K0K1D8 114 aa16.91■□□□□ 0.3
HOXC8-201ENST00000040584 HAX1O00165 279 aa16.91■□□□□ 0.3
HOXC8-201ENST00000040584 TCRAP04437 139 aa16.91■□□□□ 0.3
HOXC8-201ENST00000040584 KLF5Q13887 457 aaPredicted RBP16.91■□□□□ 0.3
HOXC8-201ENST00000040584 HIST2H2BDQ6DRA6 164 aa16.91■□□□□ 0.3
HOXC8-201ENST00000040584 A0A1W2PS18 150 aa16.9■□□□□ 0.3
HOXC8-201ENST00000040584 ZNF324O75467 553 aaPredicted RBP16.9■□□□□ 0.3
HOXC8-201ENST00000040584 GNG5P63218 68 aa16.9■□□□□ 0.3
HOXC8-201ENST00000040584 UBE2E2Q96LR5 201 aa16.9■□□□□ 0.3
HOXC8-201ENST00000040584 SLC25A39Q9BZJ4 359 aaPredicted RBP16.9■□□□□ 0.3
HOXC8-201ENST00000040584 RPP21Q9H633 154 aaKnown RBP16.9■□□□□ 0.3
HOXC8-201ENST00000040584 CA1P00915 261 aaPredicted RBP16.9■□□□□ 0.3
HOXC8-201ENST00000040584 AMTP48728 403 aa16.9■□□□□ 0.3
HOXC8-201ENST00000040584 KIAA1644Q3SXP7 199 aa16.9■□□□□ 0.3
HOXC8-201ENST00000040584 DAZAP1Q96EP5 407 aaKnown RBP16.9■□□□□ 0.3
HOXC8-201ENST00000040584 PEF1Q9UBV8 284 aaKnown RBP16.9■□□□□ 0.3
HOXC8-201ENST00000040584 M0R143 59 aa16.89■□□□□ 0.29
HOXC8-201ENST00000040584 RELQ04864 619 aaPredicted RBP16.89■□□□□ 0.29
HOXC8-201ENST00000040584 PRR27Q6MZM9 219 aa16.89■□□□□ 0.29
HOXC8-201ENST00000040584 LYPD1Q8N2G4 141 aa16.89■□□□□ 0.29
HOXC8-201ENST00000040584 NEU1Q99519 415 aa16.89■□□□□ 0.29
HOXC8-201ENST00000040584 NRN1Q9NPD7 142 aa16.89■□□□□ 0.29
HOXC8-201ENST00000040584 RNF114Q9Y508 228 aa16.89■□□□□ 0.29
HOXC8-201ENST00000040584 HIGD1CA8MV81 97 aa16.88■□□□□ 0.29
HOXC8-201ENST00000040584 F2Z2F3 143 aa16.88■□□□□ 0.29
HOXC8-201ENST00000040584 P01737 135 aa16.88■□□□□ 0.29
HOXC8-201ENST00000040584 C18orf65Q6ZTR6 163 aa16.88■□□□□ 0.29
HOXC8-201ENST00000040584 C11orf44Q8N8P7 122 aa16.88■□□□□ 0.29
HOXC8-201ENST00000040584 VAMP8Q9BV40 100 aa16.88■□□□□ 0.29
HOXC8-201ENST00000040584 ZFAND3Q9H8U3 227 aa16.88■□□□□ 0.29
HOXC8-201ENST00000040584 C2CD3Q4AC94 2353 aa16.88■□□□□ 0.29
HOXC8-201ENST00000040584 KHDC1LQ5JSQ8 128 aa16.88■□□□□ 0.29
HOXC8-201ENST00000040584 OR4B1Q8NGF8 309 aa16.88■□□□□ 0.29
HOXC8-201ENST00000040584 MIEN1Q9BRT3 115 aa16.88■□□□□ 0.29
HOXC8-201ENST00000040584 C19orf71A6NCJ1 209 aa16.87■□□□□ 0.29
HOXC8-201ENST00000040584 LGALS1P09382 135 aaKnown RBP16.87■□□□□ 0.29
HOXC8-201ENST00000040584 BPIFA4PQ86YQ2 179 aa16.87■□□□□ 0.29
HOXC8-201ENST00000040584 JMJD1CQ15652 2540 aa16.87■□□□□ 0.29
HOXC8-201ENST00000040584 A0A1B0GV90 55 aa16.86■□□□□ 0.29
HOXC8-201ENST00000040584 A0A1B0GXF2 115 aa16.86■□□□□ 0.29
HOXC8-201ENST00000040584 CLPSL1A2RUU4 121 aa16.86■□□□□ 0.29
HOXC8-201ENST00000040584 CD28P10747 220 aa16.86■□□□□ 0.29
HOXC8-201ENST00000040584 SLAQ13239 276 aa16.86■□□□□ 0.29
HOXC8-201ENST00000040584 LEMD1Q68G75 181 aa16.86■□□□□ 0.29
HOXC8-201ENST00000040584 C18orf32Q8TCD1 76 aa16.86■□□□□ 0.29
HOXC8-201ENST00000040584 BORCS7Q96B45 105 aa16.86■□□□□ 0.29
HOXC8-201ENST00000040584 SHANK2-AS3Q9BTD1 123 aa16.86■□□□□ 0.29
HOXC8-201ENST00000040584 DIRC3C9JPN6 131 aa16.86■□□□□ 0.29
HOXC8-201ENST00000040584 PROK1P58294 105 aa16.86■□□□□ 0.29
HOXC8-201ENST00000040584 HBBP68871 147 aa16.86■□□□□ 0.29
HOXC8-201ENST00000040584 H3BRN7 92 aa16.85■□□□□ 0.29
HOXC8-201ENST00000040584 K7EQM0 130 aa16.85■□□□□ 0.29
HOXC8-201ENST00000040584 OR4F17Q8NGA8 305 aa16.85■□□□□ 0.29
HOXC8-201ENST00000040584 RAB4AP20338 218 aa16.84■□□□□ 0.29
HOXC8-201ENST00000040584 KRTDAPP60985 99 aa16.84■□□□□ 0.29
HOXC8-201ENST00000040584 UNQ9165/PRO28630Q6UXU0 137 aa16.84■□□□□ 0.29
HOXC8-201ENST00000040584 RPH3ALQ9UNE2 315 aa16.84■□□□□ 0.29
HOXC8-201ENST00000040584 NPIPB6E9PJ23 425 aa16.84■□□□□ 0.29
HOXC8-201ENST00000040584 SNRPCP09234 159 aaKnown RBP16.84■□□□□ 0.29
HOXC8-201ENST00000040584 RCHY1Q96PM5 261 aa16.84■□□□□ 0.29
HOXC8-201ENST00000040584 ALKBH7Q9BT30 221 aaPredicted RBP16.84■□□□□ 0.29
HOXC8-201ENST00000040584 RABAC1Q9UI14 185 aa16.84■□□□□ 0.29
HOXC8-201ENST00000040584 ZFP30Q9Y2G7 519 aa16.84■□□□□ 0.29
HOXC8-201ENST00000040584 ZNF207O43670 478 aaKnown RBP16.83■□□□□ 0.28
HOXC8-201ENST00000040584 DMRTA1Q5VZB9 504 aa16.83■□□□□ 0.28
HOXC8-201ENST00000040584 RBPMS2Q6ZRY4 209 aaKnown RBP16.83■□□□□ 0.28
HOXC8-201ENST00000040584 IGHV4OR15-8A0A075B7B6 117 aa16.82■□□□□ 0.28
HOXC8-201ENST00000040584 A0A087WW49 117 aa16.82■□□□□ 0.28
HOXC8-201ENST00000040584 NDUFA4O00483 81 aa16.82■□□□□ 0.28
HOXC8-201ENST00000040584 CD33P20138 364 aa16.82■□□□□ 0.28
HOXC8-201ENST00000040584 PMCHP20382 165 aa16.82■□□□□ 0.28
HOXC8-201ENST00000040584 DEFB136Q30KP8 78 aa16.82■□□□□ 0.28
HOXC8-201ENST00000040584 TRBV19A0A075B6N1 114 aa16.82■□□□□ 0.28
HOXC8-201ENST00000040584 Q86TA4 180 aa16.82■□□□□ 0.28
HOXC8-201ENST00000040584 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.82■□□□□ 0.28
HOXC8-201ENST00000040584 TMEM75Q8N9X5 138 aa16.82■□□□□ 0.28
HOXC8-201ENST00000040584 KLHL30-AS1Q8NEE0 82 aa16.82■□□□□ 0.28
HOXC8-201ENST00000040584 C4orf3Q8WVX3 66 aa16.82■□□□□ 0.28
HOXC8-201ENST00000040584 CITED2Q99967 270 aaPredicted RBP16.82■□□□□ 0.28
HOXC8-201ENST00000040584 HSBP1O75506 76 aa16.81■□□□□ 0.28
HOXC8-201ENST00000040584 GDF5OSQ5U4N7 250 aa16.81■□□□□ 0.28
HOXC8-201ENST00000040584 ZNF705AQ6ZN79 300 aaPredicted RBP16.81■□□□□ 0.28
HOXC8-201ENST00000040584 CAMPP49913 170 aa16.8■□□□□ 0.28
HOXC8-201ENST00000040584 FOXA3P55318 350 aaPredicted RBP16.8■□□□□ 0.28
HOXC8-201ENST00000040584 NUTF2P61970 127 aaKnown RBP16.8■□□□□ 0.28
HOXC8-201ENST00000040584 PMCHL1Q16048 86 aa16.8■□□□□ 0.28
HOXC8-201ENST00000040584 NIT1Q86X76 327 aa16.8■□□□□ 0.28
HOXC8-201ENST00000040584 SNHG12Q9BXW3 62 aa16.8■□□□□ 0.28
HOXC8-201ENST00000040584 A0A1W2PRX2 142 aa16.8■□□□□ 0.28
HOXC8-201ENST00000040584 S100A7P31151 101 aa16.8■□□□□ 0.28
HOXC8-201ENST00000040584 PDE6HQ13956 83 aa16.8■□□□□ 0.28
HOXC8-201ENST00000040584 SGK494Q96LW2 274 aa16.8■□□□□ 0.28
HOXC8-201ENST00000040584 IGHV3-49A0A0A0MS15 119 aa16.79■□□□□ 0.28
HOXC8-201ENST00000040584 GPHB5Q86YW7 130 aa16.79■□□□□ 0.28
HOXC8-201ENST00000040584 ARL6IP6Q8N6S5 226 aa16.79■□□□□ 0.28
HOXC8-201ENST00000040584 Q8N976 141 aa16.79■□□□□ 0.28
HOXC8-201ENST00000040584 METTL26Q96S19 204 aa16.79■□□□□ 0.28
HOXC8-201ENST00000040584 PAM16Q9Y3D7 125 aa16.79■□□□□ 0.28
HOXC8-201ENST00000040584 IGHV3OR16-13A0A075B7E8 117 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms