RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 TRAV8-2A0A0B4J237 113 aa7.02□□□□□ -1.29
PHGDH-228ENST00000641847 TRAV25A0A0B4J276 109 aa7.02□□□□□ -1.29
PHGDH-228ENST00000641847 IZUMO1RA6ND01 250 aa7.02□□□□□ -1.29
PHGDH-228ENST00000641847 FAM74A7A6NL05 159 aa7.02□□□□□ -1.29
PHGDH-228ENST00000641847 DNASE2O00115 360 aaPredicted RBP7.02□□□□□ -1.29
PHGDH-228ENST00000641847 SOCS3O14543 225 aa7.02□□□□□ -1.29
PHGDH-228ENST00000641847 TSPAN4O14817 238 aa7.02□□□□□ -1.29
PHGDH-228ENST00000641847 PAGE4O60829 102 aa7.02□□□□□ -1.29
PHGDH-228ENST00000641847 ZNF253O75346 499 aa7.02□□□□□ -1.29
PHGDH-228ENST00000641847 BCL2P10415 239 aa7.02□□□□□ -1.29
PHGDH-228ENST00000641847 INSL3P51460 131 aa7.02□□□□□ -1.29
PHGDH-228ENST00000641847 PAFAH1B2P68402 229 aa7.02□□□□□ -1.29
PHGDH-228ENST00000641847 PSG9Q00887 426 aa7.02□□□□□ -1.29
PHGDH-228ENST00000641847 LCN12Q6JVE5 192 aa7.02□□□□□ -1.29
PHGDH-228ENST00000641847 DCANP1Q8TF63 244 aa7.02□□□□□ -1.29
PHGDH-228ENST00000641847 SPAG8Q99932 426 aaPredicted RBP7.02□□□□□ -1.29
PHGDH-228ENST00000641847 SLC50A1Q9BRV3 221 aa7.02□□□□□ -1.29
PHGDH-228ENST00000641847 Q9H3A6 140 aa7.02□□□□□ -1.29
PHGDH-228ENST00000641847 ARL2-SNX15V9GYD0 113 aa7.02□□□□□ -1.29
PHGDH-228ENST00000641847 TRAV2A0A0B4J234 112 aa7.01□□□□□ -1.29
PHGDH-228ENST00000641847 LOC102723971A0A1B0GUV8 181 aa7.01□□□□□ -1.29
PHGDH-228ENST00000641847 A0A1W2PRE2 83 aa7.01□□□□□ -1.29
PHGDH-228ENST00000641847 OR4C46A6NHA9 309 aa7.01□□□□□ -1.29
PHGDH-228ENST00000641847 GGTLC3B5MD39 225 aa7.01□□□□□ -1.29
PHGDH-228ENST00000641847 ATP5G3P48201 142 aa7.01□□□□□ -1.29
PHGDH-228ENST00000641847 RANP62826 216 aaKnown RBP7.01□□□□□ -1.29
PHGDH-228ENST00000641847 GUCA2BQ16661 112 aa7.01□□□□□ -1.29
PHGDH-228ENST00000641847 HAGHQ16775 308 aa7.01□□□□□ -1.29
PHGDH-228ENST00000641847 TOR2AQ5JU69 321 aa7.01□□□□□ -1.29
PHGDH-228ENST00000641847 CST9LP1Q5W188 147 aa7.01□□□□□ -1.29
PHGDH-228ENST00000641847 IGFL4Q6B9Z1 124 aa7.01□□□□□ -1.29
PHGDH-228ENST00000641847 EXOC3-AS1Q8N2X6 119 aa7.01□□□□□ -1.29
PHGDH-228ENST00000641847 RNF182Q8N6D2 247 aa7.01□□□□□ -1.29
PHGDH-228ENST00000641847 AAMDCQ9H7C9 122 aa7.01□□□□□ -1.29
PHGDH-228ENST00000641847 ZNF331Q9NQX6 463 aaPredicted RBP7.01□□□□□ -1.29
PHGDH-228ENST00000641847 OTORQ9NRC9 128 aa7.01□□□□□ -1.29
PHGDH-228ENST00000641847 ALMS1Q8TCU4 4167 aa7□□□□□ -1.29
PHGDH-228ENST00000641847 K7EQG2 157 aa7□□□□□ -1.29
PHGDH-228ENST00000641847 ISLRO14498 428 aa7□□□□□ -1.29
PHGDH-228ENST00000641847 FRMD6-AS1P0C7T7 363 aa7□□□□□ -1.29
PHGDH-228ENST00000641847 HLA-DMBP28068 263 aa7□□□□□ -1.29
PHGDH-228ENST00000641847 TAGLN2P37802 199 aaKnown RBP7□□□□□ -1.29
PHGDH-228ENST00000641847 ID1P41134 155 aa7□□□□□ -1.29
PHGDH-228ENST00000641847 PMS2P11Q13670 270 aa7□□□□□ -1.29
PHGDH-228ENST00000641847 ICAM4Q14773 271 aa7□□□□□ -1.29
PHGDH-228ENST00000641847 ZNF506Q5JVG8 444 aa7□□□□□ -1.29
PHGDH-228ENST00000641847 FAM24BQ8N5W8 94 aa7□□□□□ -1.29
PHGDH-228ENST00000641847 C20orf173Q96LM9 149 aa7□□□□□ -1.29
PHGDH-228ENST00000641847 FAM210AQ96ND0 272 aa7□□□□□ -1.29
PHGDH-228ENST00000641847 RBFOX3A6NFN3 312 aa6.99□□□□□ -1.29
PHGDH-228ENST00000641847 C11orf94C9JXX5 98 aa6.99□□□□□ -1.29
PHGDH-228ENST00000641847 SLC25A5P05141 298 aaKnown RBP6.99□□□□□ -1.29
PHGDH-228ENST00000641847 ZNF688P0C7X2 276 aa6.99□□□□□ -1.29
PHGDH-228ENST00000641847 SNRPD3P62318 126 aaKnown RBP6.99□□□□□ -1.29
PHGDH-228ENST00000641847 GNG5P63218 68 aa6.99□□□□□ -1.29
PHGDH-228ENST00000641847 PSMG4Q5JS54 123 aa6.99□□□□□ -1.29
PHGDH-228ENST00000641847 COMMD7Q86VX2 200 aa6.99□□□□□ -1.29
PHGDH-228ENST00000641847 LYPD1Q8N2G4 141 aa6.99□□□□□ -1.29
PHGDH-228ENST00000641847 CMTM2Q8TAZ6 248 aa6.99□□□□□ -1.29
PHGDH-228ENST00000641847 MRPL53Q96EL3 112 aaKnown RBP6.99□□□□□ -1.29
PHGDH-228ENST00000641847 LINC00052Q96N35 136 aa6.99□□□□□ -1.29
PHGDH-228ENST00000641847 RARRES2Q99969 163 aa6.99□□□□□ -1.29
PHGDH-228ENST00000641847 EIF5A2Q9GZV4 153 aaKnown RBP6.99□□□□□ -1.29
PHGDH-228ENST00000641847 EDA2RQ9HAV5 297 aa6.99□□□□□ -1.29
PHGDH-228ENST00000641847 CLEC5AQ9NY25 188 aa6.99□□□□□ -1.29
PHGDH-228ENST00000641847 VAX2Q9UIW0 290 aa6.99□□□□□ -1.29
PHGDH-228ENST00000641847 RPH3ALQ9UNE2 315 aa6.99□□□□□ -1.29
PHGDH-228ENST00000641847 LINC00862A6NCI5 91 aa6.98□□□□□ -1.29
PHGDH-228ENST00000641847 PGPA6NDG6 321 aa6.98□□□□□ -1.29
PHGDH-228ENST00000641847 M0R3E3 92 aa6.98□□□□□ -1.29
PHGDH-228ENST00000641847 PRB4P10163 310 aaPredicted RBP6.98□□□□□ -1.29
PHGDH-228ENST00000641847 CSN1S1P47710 185 aa6.98□□□□□ -1.29
PHGDH-228ENST00000641847 SUMO1P63165 101 aaKnown RBP6.98□□□□□ -1.29
PHGDH-228ENST00000641847 MEF2BQ02080 365 aaPredicted RBP6.98□□□□□ -1.29
PHGDH-228ENST00000641847 PSG3Q16557 428 aa6.98□□□□□ -1.29
PHGDH-228ENST00000641847 C5orf17Q8NAS9 161 aa6.98□□□□□ -1.29
PHGDH-228ENST00000641847 ZNF738Q8NE65 137 aa6.98□□□□□ -1.29
PHGDH-228ENST00000641847 RXFP4Q8TDU9 374 aa6.98□□□□□ -1.29
PHGDH-228ENST00000641847 TXNDC17Q9BRA2 123 aa6.98□□□□□ -1.29
PHGDH-228ENST00000641847 NKX6-2Q9C056 277 aaPredicted RBP6.98□□□□□ -1.29
PHGDH-228ENST00000641847 MAP6D1Q9H9H5 199 aa6.98□□□□□ -1.29
PHGDH-228ENST00000641847 MED9Q9NWA0 146 aa6.98□□□□□ -1.29
PHGDH-228ENST00000641847 PRELID1Q9Y255 219 aa6.98□□□□□ -1.29
PHGDH-228ENST00000641847 HECTD4Q9Y4D8 3996 aa6.98□□□□□ -1.29
PHGDH-228ENST00000641847 SCO2A0A1W2PP80 73 aa6.97□□□□□ -1.29
PHGDH-228ENST00000641847 ZNF705FA8MVS1 300 aaPredicted RBP6.97□□□□□ -1.29
PHGDH-228ENST00000641847 PRAC2D3DTV9 90 aa6.97□□□□□ -1.29
PHGDH-228ENST00000641847 F6UZH7 168 aa6.97□□□□□ -1.29
PHGDH-228ENST00000641847 PEX7O00628 323 aa6.97□□□□□ -1.29
PHGDH-228ENST00000641847 CD81P60033 236 aa6.97□□□□□ -1.29
PHGDH-228ENST00000641847 SRSF3P84103 164 aaKnown RBP6.97□□□□□ -1.29
PHGDH-228ENST00000641847 PEA15Q15121 130 aa6.97□□□□□ -1.29
PHGDH-228ENST00000641847 ODF3L2Q3SX64 289 aa6.97□□□□□ -1.29
PHGDH-228ENST00000641847 CCDC28AQ8IWP9 274 aa6.97□□□□□ -1.29
PHGDH-228ENST00000641847 RPUSD4Q96CM3 377 aaKnown RBP6.97□□□□□ -1.29
PHGDH-228ENST00000641847 TM2D3Q9BRN9 247 aa6.97□□□□□ -1.29
PHGDH-228ENST00000641847 TCEAL7Q9BRU2 100 aa6.97□□□□□ -1.29
PHGDH-228ENST00000641847 EPDR1Q9UM22 224 aa6.97□□□□□ -1.29
PHGDH-228ENST00000641847 IGKV2-40A0A087WW87 121 aaPredicted RBP6.96□□□□□ -1.3
PHGDH-228ENST00000641847 RAB19A4D1S5 217 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 179.5 ms