RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.4□□□□□ -0.26
CACNA1A-258ENST00000638029 LYZL1Q6UWQ5 148 aa13.4□□□□□ -0.26
CACNA1A-258ENST00000638029 RMI2Q96E14 147 aa13.4□□□□□ -0.26
CACNA1A-258ENST00000638029 LINC01590Q5TEZ4 76 aa13.4□□□□□ -0.26
CACNA1A-258ENST00000638029 TRBV25-1A0A075B6N4 114 aa13.39□□□□□ -0.27
CACNA1A-258ENST00000638029 A0A0G2JNJ9 132 aa13.39□□□□□ -0.27
CACNA1A-258ENST00000638029 A0A1W2PRE2 83 aa13.39□□□□□ -0.27
CACNA1A-258ENST00000638029 MORN2Q502X0 79 aa13.39□□□□□ -0.27
CACNA1A-258ENST00000638029 MPV17L2Q567V2 206 aa13.39□□□□□ -0.27
CACNA1A-258ENST00000638029 Q9UFV3 132 aa13.39□□□□□ -0.27
CACNA1A-258ENST00000638029 YPEL1O60688 119 aa13.39□□□□□ -0.27
CACNA1A-258ENST00000638029 YPEL2Q96QA6 119 aa13.39□□□□□ -0.27
CACNA1A-258ENST00000638029 C20orf204Q6ZNR8 217 aa13.39□□□□□ -0.27
CACNA1A-258ENST00000638029 WDR90Q96KV7 1748 aa13.39□□□□□ -0.27
CACNA1A-258ENST00000638029 MYMXA0A1B0GTQ4 84 aa13.39□□□□□ -0.27
CACNA1A-258ENST00000638029 TMEM158Q8WZ71 300 aa13.39□□□□□ -0.27
CACNA1A-258ENST00000638029 CHAC1Q9BUX1 264 aa13.39□□□□□ -0.27
CACNA1A-258ENST00000638029 SH2D1AO60880 128 aa13.38□□□□□ -0.27
CACNA1A-258ENST00000638029 RNF183Q96D59 192 aa13.38□□□□□ -0.27
CACNA1A-258ENST00000638029 SAA4P35542 130 aa13.38□□□□□ -0.27
CACNA1A-258ENST00000638029 C10orf55Q5SWW7 151 aa13.38□□□□□ -0.27
CACNA1A-258ENST00000638029 PLEKHB2Q96CS7 222 aa13.38□□□□□ -0.27
CACNA1A-258ENST00000638029 OBSL1O75147 1896 aa13.38□□□□□ -0.27
CACNA1A-258ENST00000638029 PVRIGQ6DKI7 326 aa13.38□□□□□ -0.27
CACNA1A-258ENST00000638029 TSSC4Q9Y5U2 329 aaPredicted RBP13.38□□□□□ -0.27
CACNA1A-258ENST00000638029 PLXNB3Q9ULL4 1909 aa13.37□□□□□ -0.27
CACNA1A-258ENST00000638029 SELLP14151 372 aa13.37□□□□□ -0.27
CACNA1A-258ENST00000638029 MRPS18CQ9Y3D5 142 aaKnown RBP13.37□□□□□ -0.27
CACNA1A-258ENST00000638029 ZNF497Q6ZNH5 498 aa13.37□□□□□ -0.27
CACNA1A-258ENST00000638029 ANKRD39Q53RE8 183 aa13.37□□□□□ -0.27
CACNA1A-258ENST00000638029 TRAV9-1A0A075B6T8 112 aa13.37□□□□□ -0.27
CACNA1A-258ENST00000638029 A0A1W2PR77 199 aa13.37□□□□□ -0.27
CACNA1A-258ENST00000638029 UPK2O00526 184 aa13.37□□□□□ -0.27
CACNA1A-258ENST00000638029 CRYGCP07315 174 aa13.37□□□□□ -0.27
CACNA1A-258ENST00000638029 OCC1Q8TAD7 63 aa13.37□□□□□ -0.27
CACNA1A-258ENST00000638029 CXCL1P09341 107 aa13.37□□□□□ -0.27
CACNA1A-258ENST00000638029 CD200R1LQ6Q8B3 271 aa13.37□□□□□ -0.27
CACNA1A-258ENST00000638029 HEPN1Q6WQI6 88 aa13.37□□□□□ -0.27
CACNA1A-258ENST00000638029 AMBPP02760 352 aa13.36□□□□□ -0.27
CACNA1A-258ENST00000638029 IGKV1D-43A0A0B4J1Z2 117 aa13.36□□□□□ -0.27
CACNA1A-258ENST00000638029 LINC01619G3V211 115 aa13.36□□□□□ -0.27
CACNA1A-258ENST00000638029 ZNF503Q96F45 646 aa13.36□□□□□ -0.27
CACNA1A-258ENST00000638029 BUB3O43684 328 aa13.36□□□□□ -0.27
CACNA1A-258ENST00000638029 INAFM2P0DMQ5 153 aa13.36□□□□□ -0.27
CACNA1A-258ENST00000638029 IGHV1-46P01743 117 aa13.35□□□□□ -0.27
CACNA1A-258ENST00000638029 HIST3H2BBQ8N257 126 aa13.35□□□□□ -0.27
CACNA1A-258ENST00000638029 TMEM258P61165 79 aa13.35□□□□□ -0.27
CACNA1A-258ENST00000638029 OVOL2Q9BRP0 275 aa13.35□□□□□ -0.27
CACNA1A-258ENST00000638029 XCL1P47992 114 aa13.35□□□□□ -0.27
CACNA1A-258ENST00000638029 PLPPR1Q8TBJ4 325 aa13.35□□□□□ -0.27
CACNA1A-258ENST00000638029 RTBDNQ9BSG5 229 aaPredicted RBP13.34□□□□□ -0.27
CACNA1A-258ENST00000638029 ADAMTS7Q9UKP4 1686 aa13.34□□□□□ -0.27
CACNA1A-258ENST00000638029 EFNB3Q15768 340 aa13.34□□□□□ -0.27
CACNA1A-258ENST00000638029 PRSS57Q6UWY2 283 aa13.34□□□□□ -0.27
CACNA1A-258ENST00000638029 UBL5Q9BZL1 73 aa13.34□□□□□ -0.27
CACNA1A-258ENST00000638029 SIGLEC9Q9Y336 463 aa13.34□□□□□ -0.27
CACNA1A-258ENST00000638029 SPATA31B1PQ5VZV4 182 aa13.34□□□□□ -0.27
CACNA1A-258ENST00000638029 FBLIM1Q8WUP2 373 aa13.33□□□□□ -0.27
CACNA1A-258ENST00000638029 SEC61GP60059 68 aa13.33□□□□□ -0.28
CACNA1A-258ENST00000638029 HCFC1P51610 2035 aa13.33□□□□□ -0.28
CACNA1A-258ENST00000638029 IGHV1-3A0A0C4DH29 117 aa13.33□□□□□ -0.28
CACNA1A-258ENST00000638029 IGKV1D-12P01611 117 aa13.33□□□□□ -0.28
CACNA1A-258ENST00000638029 RHPN1-AS1Q9BWJ2 59 aa13.33□□□□□ -0.28
CACNA1A-258ENST00000638029 MALRD1Q5VYJ5 2156 aa13.33□□□□□ -0.28
CACNA1A-258ENST00000638029 SORL1Q92673 2214 aa13.33□□□□□ -0.28
CACNA1A-258ENST00000638029 SUPT4H1P63272 117 aaKnown RBP13.33□□□□□ -0.28
CACNA1A-258ENST00000638029 ESM1Q9NQ30 184 aa13.33□□□□□ -0.28
CACNA1A-258ENST00000638029 IGHV4OR15-8A0A075B7B6 117 aa13.33□□□□□ -0.28
CACNA1A-258ENST00000638029 A0A087WW49 117 aa13.33□□□□□ -0.28
CACNA1A-258ENST00000638029 COL8A2P25067 703 aa13.33□□□□□ -0.28
CACNA1A-258ENST00000638029 IGLV3-21P80748 117 aaPredicted RBP13.33□□□□□ -0.28
CACNA1A-258ENST00000638029 CCL20P78556 96 aa13.32□□□□□ -0.28
CACNA1A-258ENST00000638029 RNASE2P10153 161 aaKnown RBP13.32□□□□□ -0.28
CACNA1A-258ENST00000638029 CEP192Q8TEP8 1941 aa13.32□□□□□ -0.28
CACNA1A-258ENST00000638029 PRR30Q53SZ7 412 aaPredicted RBP13.31□□□□□ -0.28
CACNA1A-258ENST00000638029 TRBV20-1A0A075B6N2 111 aa13.31□□□□□ -0.28
CACNA1A-258ENST00000638029 OVOL3O00110 214 aa13.31□□□□□ -0.28
CACNA1A-258ENST00000638029 TRAV26-2A0A0B4J265 109 aa13.31□□□□□ -0.28
CACNA1A-258ENST00000638029 SIPA1L1O43166 1804 aa13.31□□□□□ -0.28
CACNA1A-258ENST00000638029 DSCAMO60469 2012 aa13.31□□□□□ -0.28
CACNA1A-258ENST00000638029 ZNRF2Q8NHG8 242 aa13.31□□□□□ -0.28
CACNA1A-258ENST00000638029 C18orf12Q96KH6 178 aa13.31□□□□□ -0.28
CACNA1A-258ENST00000638029 GREM1O60565 184 aa13.3□□□□□ -0.28
CACNA1A-258ENST00000638029 C1orf194Q5T5A4 169 aa13.3□□□□□ -0.28
CACNA1A-258ENST00000638029 F8W735 103 aaPredicted RBP13.3□□□□□ -0.28
CACNA1A-258ENST00000638029 TIRAPP58753 221 aa13.3□□□□□ -0.28
CACNA1A-258ENST00000638029 CR1LQ2VPA4 569 aa13.3□□□□□ -0.28
CACNA1A-258ENST00000638029 NEGR1Q7Z3B1 354 aa13.3□□□□□ -0.28
CACNA1A-258ENST00000638029 FAM231BA6NCW3 169 aa13.3□□□□□ -0.28
CACNA1A-258ENST00000638029 MSMBP08118 114 aa13.3□□□□□ -0.28
CACNA1A-258ENST00000638029 MST1LQ2TV78 715 aa13.3□□□□□ -0.28
CACNA1A-258ENST00000638029 TIMP3P35625 211 aa13.3□□□□□ -0.28
CACNA1A-258ENST00000638029 UBE2AP49459 152 aa13.3□□□□□ -0.28
CACNA1A-258ENST00000638029 C8orf49Q96NF6 230 aa13.3□□□□□ -0.28
CACNA1A-258ENST00000638029 PPBPP02775 128 aa13.29□□□□□ -0.28
CACNA1A-258ENST00000638029 AMN1Q8IY45 258 aa13.29□□□□□ -0.28
CACNA1A-258ENST00000638029 CFHR2P36980 270 aa13.29□□□□□ -0.28
CACNA1A-258ENST00000638029 STPG4Q8N801 248 aa13.29□□□□□ -0.28
CACNA1A-258ENST00000638029 VSIRQ9H7M9 311 aa13.29□□□□□ -0.28
CACNA1A-258ENST00000638029 IGKV1D-13A0A0B4J2D9 117 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms