RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 MBD3L1Q8WWY6 194 aa10.05□□□□□ -0.8
NEK3-210ENST00000620675 Q9H3A6 140 aa10.05□□□□□ -0.8
NEK3-210ENST00000620675 UBE2G2P60604 165 aa10.04□□□□□ -0.8
NEK3-210ENST00000620675 EIF5AL1Q6IS14 154 aaKnown RBP10.04□□□□□ -0.8
NEK3-210ENST00000620675 LINC00322Q6ZN03 302 aaPredicted RBP10.04□□□□□ -0.8
NEK3-210ENST00000620675 RPUSD4Q96CM3 377 aaKnown RBP10.04□□□□□ -0.8
NEK3-210ENST00000620675 YTHDF2Q9Y5A9 579 aaKnown RBP10.04□□□□□ -0.8
NEK3-210ENST00000620675 A0A0J9YX75 114 aa10.03□□□□□ -0.8
NEK3-210ENST00000620675 ZNF253O75346 499 aa10.03□□□□□ -0.8
NEK3-210ENST00000620675 H2AFB1P0C5Y9 115 aa10.03□□□□□ -0.8
NEK3-210ENST00000620675 ASCL2Q99929 193 aa10.03□□□□□ -0.8
NEK3-210ENST00000620675 SAV1Q9H4B6 383 aaPredicted RBP10.03□□□□□ -0.8
NEK3-210ENST00000620675 H3BMM0 161 aa10.03□□□□□ -0.8
NEK3-210ENST00000620675 SBSPONQ8IVN8 264 aa10.03□□□□□ -0.8
NEK3-210ENST00000620675 PGPA6NDG6 321 aa10.02□□□□□ -0.81
NEK3-210ENST00000620675 ZNF705EA8MWA4 302 aaPredicted RBP10.02□□□□□ -0.81
NEK3-210ENST00000620675 A8MZ25 164 aa10.02□□□□□ -0.81
NEK3-210ENST00000620675 GGTLC3B5MD39 225 aa10.02□□□□□ -0.81
NEK3-210ENST00000620675 HLA-DRB4P13762 266 aa10.02□□□□□ -0.81
NEK3-210ENST00000620675 GNG5P63218 68 aa10.02□□□□□ -0.81
NEK3-210ENST00000620675 TEX261Q6UWH6 196 aa10.02□□□□□ -0.81
NEK3-210ENST00000620675 DPPA3Q6W0C5 159 aa10.02□□□□□ -0.81
NEK3-210ENST00000620675 FOXI2Q6ZQN5 318 aa10.02□□□□□ -0.81
NEK3-210ENST00000620675 TRPT1Q86TN4 253 aaKnown RBP10.02□□□□□ -0.81
NEK3-210ENST00000620675 HLA-DRB4X5D2U9 266 aa10.02□□□□□ -0.81
NEK3-210ENST00000620675 IGKV2-40A0A087WW87 121 aaPredicted RBP10.02□□□□□ -0.81
NEK3-210ENST00000620675 IGKV2D-40P01614 121 aaPredicted RBP10.02□□□□□ -0.81
NEK3-210ENST00000620675 GIG44P09565 113 aaPredicted RBP10.02□□□□□ -0.81
NEK3-210ENST00000620675 RAB5CP51148 216 aa10.02□□□□□ -0.81
NEK3-210ENST00000620675 FXYD7P58549 80 aa10.02□□□□□ -0.81
NEK3-210ENST00000620675 PSG9Q00887 426 aa10.02□□□□□ -0.81
NEK3-210ENST00000620675 ERCC8Q13216 396 aa10.02□□□□□ -0.81
NEK3-210ENST00000620675 SAMD13Q5VXD3 122 aa10.02□□□□□ -0.81
NEK3-210ENST00000620675 STHQ8IWL8 128 aa10.02□□□□□ -0.81
NEK3-210ENST00000620675 OR4B1Q8NGF8 309 aa10.02□□□□□ -0.81
NEK3-210ENST00000620675 OR8A1Q8NGG7 326 aa10.02□□□□□ -0.81
NEK3-210ENST00000620675 CNN1P51911 297 aaKnown RBP10.01□□□□□ -0.81
NEK3-210ENST00000620675 CMC4P56277 68 aaPredicted RBP10.01□□□□□ -0.81
NEK3-210ENST00000620675 HIST1H1AQ02539 215 aaPredicted RBP10.01□□□□□ -0.81
NEK3-210ENST00000620675 HAGHQ16775 308 aa10.01□□□□□ -0.81
NEK3-210ENST00000620675 ZNF680Q8NEM1 530 aa10.01□□□□□ -0.81
NEK3-210ENST00000620675 SLC35B3Q9H1N7 401 aa10.01□□□□□ -0.81
NEK3-210ENST00000620675 TMEM167BQ9NRX6 74 aa10.01□□□□□ -0.81
NEK3-210ENST00000620675 RPH3ALQ9UNE2 315 aa10.01□□□□□ -0.81
NEK3-210ENST00000620675 LOC102724200A0A096LPH7 203 aaPredicted RBP10□□□□□ -0.81
NEK3-210ENST00000620675 AAMDCQ9H7C9 122 aa10□□□□□ -0.81
NEK3-210ENST00000620675 FAM74A7A6NL05 159 aa10□□□□□ -0.81
NEK3-210ENST00000620675 SUMO1P63165 101 aaKnown RBP10□□□□□ -0.81
NEK3-210ENST00000620675 VGLL1Q99990 258 aa10□□□□□ -0.81
NEK3-210ENST00000620675 RETNQ9HD89 108 aa10□□□□□ -0.81
NEK3-210ENST00000620675 OTORQ9NRC9 128 aa10□□□□□ -0.81
NEK3-210ENST00000620675 PAGE4O60829 102 aa9.99□□□□□ -0.81
NEK3-210ENST00000620675 ATP5G3P48201 142 aa9.99□□□□□ -0.81
NEK3-210ENST00000620675 IFITM2Q01629 132 aa9.99□□□□□ -0.81
NEK3-210ENST00000620675 KIR3DS1Q14943 382 aa9.99□□□□□ -0.81
NEK3-210ENST00000620675 EBLN2Q6P2I7 272 aa9.99□□□□□ -0.81
NEK3-210ENST00000620675 AMTNQ6UX39 209 aa9.99□□□□□ -0.81
NEK3-210ENST00000620675 LYPD1Q8N2G4 141 aa9.98□□□□□ -0.81
NEK3-210ENST00000620675 SGK494Q96LW2 274 aa9.98□□□□□ -0.81
NEK3-210ENST00000620675 CLEC5AQ9NY25 188 aa9.98□□□□□ -0.81
NEK3-210ENST00000620675 TRAV8-1A0A0A6YYK1 113 aa9.98□□□□□ -0.81
NEK3-210ENST00000620675 TRAV1-1A0A0B4J248 108 aa9.98□□□□□ -0.81
NEK3-210ENST00000620675 SLC25A5P05141 298 aaKnown RBP9.98□□□□□ -0.81
NEK3-210ENST00000620675 AGPAT4-IT1Q9H0P7 198 aa9.98□□□□□ -0.81
NEK3-210ENST00000620675 A0A1W2PRE2 83 aa9.97□□□□□ -0.81
NEK3-210ENST00000620675 A8MTW9 85 aa9.97□□□□□ -0.81
NEK3-210ENST00000620675 DIRC3C9JPN6 131 aa9.97□□□□□ -0.81
NEK3-210ENST00000620675 TEX46H3BTG2 121 aa9.97□□□□□ -0.81
NEK3-210ENST00000620675 M0R2Z0 102 aa9.97□□□□□ -0.81
NEK3-210ENST00000620675 CT45A10P0DMU9 189 aa9.97□□□□□ -0.81
NEK3-210ENST00000620675 GOLT1AQ6ZVE7 132 aa9.97□□□□□ -0.81
NEK3-210ENST00000620675 Q8TAT8 98 aa9.97□□□□□ -0.81
NEK3-210ENST00000620675 MRPL53Q96EL3 112 aaKnown RBP9.97□□□□□ -0.81
NEK3-210ENST00000620675 B9D2Q9BPU9 175 aa9.97□□□□□ -0.81
NEK3-210ENST00000620675 GNG13Q9P2W3 67 aa9.97□□□□□ -0.81
NEK3-210ENST00000620675 CA1P00915 261 aaPredicted RBP9.97□□□□□ -0.81
NEK3-210ENST00000620675 SPINK13Q1W4C9 94 aa9.97□□□□□ -0.81
NEK3-210ENST00000620675 DEFB135Q30KP9 77 aa9.97□□□□□ -0.81
NEK3-210ENST00000620675 CST9LP1Q5W188 147 aa9.97□□□□□ -0.81
NEK3-210ENST00000620675 LINC00479Q96M42 142 aa9.97□□□□□ -0.81
NEK3-210ENST00000620675 CSTL1Q9H114 145 aa9.97□□□□□ -0.81
NEK3-210ENST00000620675 XCL2Q9UBD3 114 aa9.97□□□□□ -0.81
NEK3-210ENST00000620675 PRELID1Q9Y255 219 aa9.97□□□□□ -0.81
NEK3-210ENST00000620675 CCDC28AQ8IWP9 274 aa9.96□□□□□ -0.81
NEK3-210ENST00000620675 TRAV12-2A0A075B6T6 113 aa9.95□□□□□ -0.82
NEK3-210ENST00000620675 NPIPB6E9PJ23 425 aa9.95□□□□□ -0.82
NEK3-210ENST00000620675 C5orf17Q8NAS9 161 aa9.95□□□□□ -0.82
NEK3-210ENST00000620675 OR10J6PQ8NGY7 276 aa9.95□□□□□ -0.82
NEK3-210ENST00000620675 LYPD6BQ8NI32 183 aa9.95□□□□□ -0.82
NEK3-210ENST00000620675 CMTM2Q8TAZ6 248 aa9.95□□□□□ -0.82
NEK3-210ENST00000620675 J3KRW8 73 aa9.95□□□□□ -0.82
NEK3-210ENST00000620675 TCRAP04437 139 aa9.95□□□□□ -0.82
NEK3-210ENST00000620675 EPDR1Q9UM22 224 aa9.95□□□□□ -0.82
NEK3-210ENST00000620675 TRAV34A0A0B4J273 112 aa9.94□□□□□ -0.82
NEK3-210ENST00000620675 CRXO43186 299 aaPredicted RBP9.94□□□□□ -0.82
NEK3-210ENST00000620675 HBE1P02100 147 aa9.94□□□□□ -0.82
NEK3-210ENST00000620675 NMBP08949 121 aa9.94□□□□□ -0.82
NEK3-210ENST00000620675 CSN1S1P47710 185 aa9.94□□□□□ -0.82
NEK3-210ENST00000620675 BLOC1S1P78537 153 aa9.94□□□□□ -0.82
NEK3-210ENST00000620675 Q6ZQT7 251 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 134.1 ms