RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 RNF223E7ERA6 249 aa9.66□□□□□ -0.86
SRRT-216ENST00000618262 PAGE4O60829 102 aa9.66□□□□□ -0.86
SRRT-216ENST00000618262 FAM168AQ92567 244 aa9.66□□□□□ -0.86
SRRT-216ENST00000618262 RASL10AQ92737 203 aa9.66□□□□□ -0.86
SRRT-216ENST00000618262 IGKV1D-8A0A087WSZ0 117 aa9.65□□□□□ -0.86
SRRT-216ENST00000618262 A0A1W2PRD5 423 aa9.65□□□□□ -0.86
SRRT-216ENST00000618262 FAM24AA6NFZ4 105 aa9.65□□□□□ -0.86
SRRT-216ENST00000618262 FCN1O00602 326 aa9.65□□□□□ -0.86
SRRT-216ENST00000618262 TRAPPC6BQ86SZ2 158 aa9.65□□□□□ -0.86
SRRT-216ENST00000618262 FAM19A2Q8N3H0 131 aa9.65□□□□□ -0.86
SRRT-216ENST00000618262 OR8B3Q8NGG8 313 aa9.65□□□□□ -0.86
SRRT-216ENST00000618262 ZNF502Q8TBZ5 544 aa9.65□□□□□ -0.86
SRRT-216ENST00000618262 OR8B2Q96RD0 313 aa9.65□□□□□ -0.86
SRRT-216ENST00000618262 DOCK11Q5JSL3 2073 aa9.65□□□□□ -0.86
SRRT-216ENST00000618262 IGHV3-43A0A0B4J1X8 118 aa9.65□□□□□ -0.87
SRRT-216ENST00000618262 IGHV4-61A0A0C4DH41 118 aa9.65□□□□□ -0.87
SRRT-216ENST00000618262 IGHV3-43DP0DP04 118 aa9.65□□□□□ -0.87
SRRT-216ENST00000618262 FOXI1Q12951 378 aa9.65□□□□□ -0.87
SRRT-216ENST00000618262 Q6ZPA2 131 aa9.65□□□□□ -0.87
SRRT-216ENST00000618262 LIAT1Q6ZQX7 453 aa9.65□□□□□ -0.87
SRRT-216ENST00000618262 PRELID3AQ96N28 172 aa9.65□□□□□ -0.87
SRRT-216ENST00000618262 MDFICQ9P1T7 246 aa9.65□□□□□ -0.87
SRRT-216ENST00000618262 MYOD1P15172 320 aa9.64□□□□□ -0.87
SRRT-216ENST00000618262 HES1Q14469 280 aa9.64□□□□□ -0.87
SRRT-216ENST00000618262 Q6P435 159 aa9.64□□□□□ -0.87
SRRT-216ENST00000618262 CIARTQ8N365 385 aaPredicted RBP9.64□□□□□ -0.87
SRRT-216ENST00000618262 LSM10Q969L4 123 aaKnown RBP9.64□□□□□ -0.87
SRRT-216ENST00000618262 OR9G9P0C7N8 305 aa9.64□□□□□ -0.87
SRRT-216ENST00000618262 KHDC1LQ5JSQ8 128 aa9.64□□□□□ -0.87
SRRT-216ENST00000618262 Q96MF0 132 aa9.64□□□□□ -0.87
SRRT-216ENST00000618262 GAFA1Q96PS6 74 aa9.64□□□□□ -0.87
SRRT-216ENST00000618262 ZNRD1Q9P1U0 126 aa9.64□□□□□ -0.87
SRRT-216ENST00000618262 HILPDAQ9Y5L2 63 aa9.64□□□□□ -0.87
SRRT-216ENST00000618262 FAM181BA6NEQ2 426 aa9.63□□□□□ -0.87
SRRT-216ENST00000618262 PDCD6O75340 191 aa9.63□□□□□ -0.87
SRRT-216ENST00000618262 SLC25A5P05141 298 aaKnown RBP9.63□□□□□ -0.87
SRRT-216ENST00000618262 CCL3L1P16619 93 aa9.63□□□□□ -0.87
SRRT-216ENST00000618262 FHL3Q13643 280 aa9.63□□□□□ -0.87
SRRT-216ENST00000618262 DEFB113Q30KQ7 82 aa9.63□□□□□ -0.87
SRRT-216ENST00000618262 ZNF695Q8IW36 515 aa9.63□□□□□ -0.87
SRRT-216ENST00000618262 LRTM2Q8N967 370 aa9.63□□□□□ -0.87
SRRT-216ENST00000618262 TSKUQ8WUA8 353 aa9.63□□□□□ -0.87
SRRT-216ENST00000618262 MXRA5Q9NR99 2828 aa9.63□□□□□ -0.87
SRRT-216ENST00000618262 hDV102S1A0JD36 115 aa9.63□□□□□ -0.87
SRRT-216ENST00000618262 MT-ND6P03923 174 aa9.63□□□□□ -0.87
SRRT-216ENST00000618262 STPG3Q8N7X2 389 aa9.63□□□□□ -0.87
SRRT-216ENST00000618262 YTHDF2Q9Y5A9 579 aaKnown RBP9.63□□□□□ -0.87
SRRT-216ENST00000618262 ABCA2Q9BZC7 2435 aa9.63□□□□□ -0.87
SRRT-216ENST00000618262 TRAV9-1A0A075B6T8 112 aa9.63□□□□□ -0.87
SRRT-216ENST00000618262 IGHV3OR16-10A0A075B7F0 116 aa9.63□□□□□ -0.87
SRRT-216ENST00000618262 C2orf91Q6ZV80 131 aa9.63□□□□□ -0.87
SRRT-216ENST00000618262 PITX3O75364 302 aa9.62□□□□□ -0.87
SRRT-216ENST00000618262 ZFP36P26651 326 aaKnown RBP9.62□□□□□ -0.87
SRRT-216ENST00000618262 CFPP27918 469 aa9.62□□□□□ -0.87
SRRT-216ENST00000618262 EWSR1Q01844 656 aaKnown RBP eCLIP9.62□□□□□ -0.87
SRRT-216ENST00000618262 EBLN2Q6P2I7 272 aa9.62□□□□□ -0.87
SRRT-216ENST00000618262 Q71RC1 249 aaPredicted RBP9.62□□□□□ -0.87
SRRT-216ENST00000618262 C20orf173Q96LM9 149 aa9.62□□□□□ -0.87
SRRT-216ENST00000618262 GPHA2Q96T91 129 aa9.62□□□□□ -0.87
SRRT-216ENST00000618262 SSBP3Q9BWW4 388 aaPredicted RBP9.62□□□□□ -0.87
SRRT-216ENST00000618262 TRBV9A0A0B4J1U6 114 aa9.62□□□□□ -0.87
SRRT-216ENST00000618262 SCTP09683 121 aa9.62□□□□□ -0.87
SRRT-216ENST00000618262 HERVK_113P63121 156 aa9.62□□□□□ -0.87
SRRT-216ENST00000618262 Q8IYB0 196 aa9.62□□□□□ -0.87
SRRT-216ENST00000618262 OR1L1Q8NH94 360 aa9.62□□□□□ -0.87
SRRT-216ENST00000618262 ATP6V0E2Q8NHE4 81 aa9.62□□□□□ -0.87
SRRT-216ENST00000618262 NIPBLQ6KC79 2804 aaeCLIP9.62□□□□□ -0.87
SRRT-216ENST00000618262 HIVEP1P15822 2718 aa9.61□□□□□ -0.87
SRRT-216ENST00000618262 FAM236AA0A1B0GUQ0 79 aa9.61□□□□□ -0.87
SRRT-216ENST00000618262 FAM236BA0A1B0GV22 79 aa9.61□□□□□ -0.87
SRRT-216ENST00000618262 SYS1-DBNDD2H3BUS1 97 aa9.61□□□□□ -0.87
SRRT-216ENST00000618262 EXOC3-AS1Q8N2X6 119 aa9.61□□□□□ -0.87
SRRT-216ENST00000618262 TMEM70Q9BUB7 260 aa9.61□□□□□ -0.87
SRRT-216ENST00000618262 C21orf62Q9NYP8 219 aa9.61□□□□□ -0.87
SRRT-216ENST00000618262 SNURFLB1AK76 121 aa9.61□□□□□ -0.87
SRRT-216ENST00000618262 NDUFB3O43676 98 aa9.61□□□□□ -0.87
SRRT-216ENST00000618262 NDUFA7O95182 113 aa9.61□□□□□ -0.87
SRRT-216ENST00000618262 SCGB1C1Q8TD33 95 aa9.61□□□□□ -0.87
SRRT-216ENST00000618262 MRPL32Q9BYC8 188 aaKnown RBP9.61□□□□□ -0.87
SRRT-216ENST00000618262 JPT2Q9H910 190 aa9.61□□□□□ -0.87
SRRT-216ENST00000618262 NAV3Q8IVL0 2385 aa9.61□□□□□ -0.87
SRRT-216ENST00000618262 TRAV5A0A0B4J249 113 aa9.6□□□□□ -0.87
SRRT-216ENST00000618262 A0A1B0GWB2 263 aa9.6□□□□□ -0.87
SRRT-216ENST00000618262 PGLYRP1O75594 196 aaPredicted RBP9.6□□□□□ -0.87
SRRT-216ENST00000618262 GAGE13Q4V321 117 aa9.6□□□□□ -0.87
SRRT-216ENST00000618262 IBA57Q5T440 356 aaKnown RBP9.6□□□□□ -0.87
SRRT-216ENST00000618262 TRPT1Q86TN4 253 aaKnown RBP9.6□□□□□ -0.87
SRRT-216ENST00000618262 CARD19Q96LW7 228 aa9.6□□□□□ -0.87
SRRT-216ENST00000618262 SMR3AQ99954 134 aa9.6□□□□□ -0.87
SRRT-216ENST00000618262 SNCGO76070 127 aa9.6□□□□□ -0.87
SRRT-216ENST00000618262 RPL31P62899 125 aaKnown RBP9.6□□□□□ -0.87
SRRT-216ENST00000618262 COX8AP10176 69 aa9.6□□□□□ -0.87
SRRT-216ENST00000618262 HSPE1P61604 102 aaKnown RBP9.6□□□□□ -0.87
SRRT-216ENST00000618262 ZNF90Q03938 601 aa9.6□□□□□ -0.87
SRRT-216ENST00000618262 FAM19A1Q7Z5A9 133 aa9.6□□□□□ -0.87
SRRT-216ENST00000618262 C10orf126Q8N4M7 172 aa9.6□□□□□ -0.87
SRRT-216ENST00000618262 TMEM191AQ9H0A3 160 aa9.6□□□□□ -0.87
SRRT-216ENST00000618262 SMIM13P0DJ93 91 aa9.59□□□□□ -0.87
SRRT-216ENST00000618262 FXYD4P59646 89 aa9.59□□□□□ -0.87
SRRT-216ENST00000618262 LINC01620Q4KN68 170 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms