RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 ERCC8Q13216 396 aa5.46□□□□□ -1.54
SYNPO2-206ENST00000610556 GDF5OSQ5U4N7 250 aa5.46□□□□□ -1.54
SYNPO2-206ENST00000610556 IGFL3Q6UXB1 125 aa5.46□□□□□ -1.54
SYNPO2-206ENST00000610556 LINC00322Q6ZN03 302 aaPredicted RBP5.46□□□□□ -1.54
SYNPO2-206ENST00000610556 ORAOV1Q8WV07 137 aa5.46□□□□□ -1.54
SYNPO2-206ENST00000610556 GTSF1Q8WW33 167 aa5.46□□□□□ -1.54
SYNPO2-206ENST00000610556 PHLDA3Q9Y5J5 127 aa5.46□□□□□ -1.54
SYNPO2-206ENST00000610556 A0A1B0GW15 77 aa5.46□□□□□ -1.54
SYNPO2-206ENST00000610556 J3QR89 54 aa5.46□□□□□ -1.54
SYNPO2-206ENST00000610556 THBDP07204 575 aa5.46□□□□□ -1.54
SYNPO2-206ENST00000610556 GRNP28799 593 aaKnown RBP5.46□□□□□ -1.54
SYNPO2-206ENST00000610556 NDPQ00604 133 aa5.46□□□□□ -1.54
SYNPO2-206ENST00000610556 FAM71F2Q6NXP2 309 aa5.46□□□□□ -1.54
SYNPO2-206ENST00000610556 TMEM75Q8N9X5 138 aa5.46□□□□□ -1.54
SYNPO2-206ENST00000610556 HIST1H4GQ99525 98 aa5.46□□□□□ -1.54
SYNPO2-206ENST00000610556 VKORC1Q9BQB6 163 aa5.46□□□□□ -1.54
SYNPO2-206ENST00000610556 C2CD3Q4AC94 2353 aa5.46□□□□□ -1.54
SYNPO2-206ENST00000610556 NDUFA3O95167 84 aa5.45□□□□□ -1.54
SYNPO2-206ENST00000610556 NDUFB8O95169 186 aa5.45□□□□□ -1.54
SYNPO2-206ENST00000610556 SCGB1C2P0DMR2 95 aa5.45□□□□□ -1.54
SYNPO2-206ENST00000610556 MRPL52Q86TS9 123 aaKnown RBP5.45□□□□□ -1.54
SYNPO2-206ENST00000610556 TMEM219Q86XT9 240 aa5.45□□□□□ -1.54
SYNPO2-206ENST00000610556 LINC00311Q8N616 119 aa5.45□□□□□ -1.54
SYNPO2-206ENST00000610556 ZNF492Q9P255 531 aa5.45□□□□□ -1.54
SYNPO2-206ENST00000610556 PTPN13Q12923 2485 aa5.45□□□□□ -1.54
SYNPO2-206ENST00000610556 IGKV1D-37A0A075B6S9 117 aa5.45□□□□□ -1.54
SYNPO2-206ENST00000610556 TRGV3P03979 118 aa5.45□□□□□ -1.54
SYNPO2-206ENST00000610556 HLA-DMBP28068 263 aa5.45□□□□□ -1.54
SYNPO2-206ENST00000610556 LINC00310P59036 64 aa5.45□□□□□ -1.54
SYNPO2-206ENST00000610556 SFTA2Q6UW10 78 aa5.45□□□□□ -1.54
SYNPO2-206ENST00000610556 PRSS57Q6UWY2 283 aa5.45□□□□□ -1.54
SYNPO2-206ENST00000610556 VMO1Q7Z5L0 202 aa5.45□□□□□ -1.54
SYNPO2-206ENST00000610556 RNF182Q8N6D2 247 aa5.45□□□□□ -1.54
SYNPO2-206ENST00000610556 OR10J6PQ8NGY7 276 aa5.45□□□□□ -1.54
SYNPO2-206ENST00000610556 SPCS1Q9Y6A9 102 aa5.45□□□□□ -1.54
SYNPO2-206ENST00000610556 TNRC6AQ8NDV7 1962 aaKnown RBP5.45□□□□□ -1.54
SYNPO2-206ENST00000610556 TMEM238LA0A1B0GVL6 79 aa5.45□□□□□ -1.54
SYNPO2-206ENST00000610556 IGKV1-17P01599 117 aa5.45□□□□□ -1.54
SYNPO2-206ENST00000610556 ATP5G2Q06055 141 aa5.45□□□□□ -1.54
SYNPO2-206ENST00000610556 GTSCR1Q86UQ5 136 aa5.45□□□□□ -1.54
SYNPO2-206ENST00000610556 WFDC12Q8WWY7 111 aa5.45□□□□□ -1.54
SYNPO2-206ENST00000610556 NHP2Q9NX24 153 aaKnown RBP5.45□□□□□ -1.54
SYNPO2-206ENST00000610556 DSCAMO60469 2012 aa5.45□□□□□ -1.54
SYNPO2-206ENST00000610556 CCL25O15444 150 aa5.44□□□□□ -1.54
SYNPO2-206ENST00000610556 LTAP01374 205 aa5.44□□□□□ -1.54
SYNPO2-206ENST00000610556 GP9P14770 177 aa5.44□□□□□ -1.54
SYNPO2-206ENST00000610556 FAM120AOSQ5T036 256 aa5.44□□□□□ -1.54
SYNPO2-206ENST00000610556 EEF1AKMT3Q96AZ1 226 aa5.44□□□□□ -1.54
SYNPO2-206ENST00000610556 MS4A6AQ9H2W1 248 aa5.44□□□□□ -1.54
SYNPO2-206ENST00000610556 IGLV2-23P01705 113 aa5.44□□□□□ -1.54
SYNPO2-206ENST00000610556 ESDP10768 282 aa5.44□□□□□ -1.54
SYNPO2-206ENST00000610556 RIPPLY3P57055 190 aa5.44□□□□□ -1.54
SYNPO2-206ENST00000610556 CT83Q5H943 113 aa5.44□□□□□ -1.54
SYNPO2-206ENST00000610556 FAM74A4Q5TZK3 123 aa5.44□□□□□ -1.54
SYNPO2-206ENST00000610556 ZNF491Q8N8L2 437 aa5.44□□□□□ -1.54
SYNPO2-206ENST00000610556 GFRA4Q9GZZ7 299 aa5.44□□□□□ -1.54
SYNPO2-206ENST00000610556 LOC107984156A0A0G2JMH3 177 aa5.44□□□□□ -1.54
SYNPO2-206ENST00000610556 SMIM13P0DJ93 91 aa5.44□□□□□ -1.54
SYNPO2-206ENST00000610556 SRD5A1P18405 259 aa5.44□□□□□ -1.54
SYNPO2-206ENST00000610556 C3orf36Q3SXR2 165 aa5.44□□□□□ -1.54
SYNPO2-206ENST00000610556 ARL17AQ8IVW1 177 aa5.44□□□□□ -1.54
SYNPO2-206ENST00000610556 WIPF2Q8TF74 440 aaPredicted RBP5.44□□□□□ -1.54
SYNPO2-206ENST00000610556 RAXQ9Y2V3 346 aa5.44□□□□□ -1.54
SYNPO2-206ENST00000610556 SHISA9B4DS77 424 aa5.43□□□□□ -1.54
SYNPO2-206ENST00000610556 H3BVH4 76 aa5.43□□□□□ -1.54
SYNPO2-206ENST00000610556 Q1RN00 199 aa5.43□□□□□ -1.54
SYNPO2-206ENST00000610556 OR2K2Q8NGT1 345 aa5.43□□□□□ -1.54
SYNPO2-206ENST00000610556 SMIM12Q96EX1 92 aa5.43□□□□□ -1.54
SYNPO2-206ENST00000610556 ZFHX4Q86UP3 3567 aa5.43□□□□□ -1.54
SYNPO2-206ENST00000610556 GAGE1Q13065 139 aa5.43□□□□□ -1.54
SYNPO2-206ENST00000610556 VGLL1Q99990 258 aa5.43□□□□□ -1.54
SYNPO2-206ENST00000610556 SIGLEC8Q9NYZ4 499 aa5.43□□□□□ -1.54
SYNPO2-206ENST00000610556 NBEAQ8NFP9 2946 aa5.43□□□□□ -1.54
SYNPO2-206ENST00000610556 G3V318 75 aa5.43□□□□□ -1.54
SYNPO2-206ENST00000610556 HAX1O00165 279 aa5.43□□□□□ -1.54
SYNPO2-206ENST00000610556 KLF5Q13887 457 aaPredicted RBP5.43□□□□□ -1.54
SYNPO2-206ENST00000610556 FAM104BQ5XKR9 115 aa5.43□□□□□ -1.54
SYNPO2-206ENST00000610556 NEU4Q8WWR8 484 aaPredicted RBP5.43□□□□□ -1.54
SYNPO2-206ENST00000610556 MEGF9Q9H1U4 602 aa5.43□□□□□ -1.54
SYNPO2-206ENST00000610556 SORL1Q92673 2214 aa5.43□□□□□ -1.54
SYNPO2-206ENST00000610556 GAGE12BA1L429 117 aa5.42□□□□□ -1.54
SYNPO2-206ENST00000610556 FAM231BA6NCW3 169 aa5.42□□□□□ -1.54
SYNPO2-206ENST00000610556 OR11H12B2RN74 326 aa5.42□□□□□ -1.54
SYNPO2-206ENST00000610556 H7C2G1 150 aa5.42□□□□□ -1.54
SYNPO2-206ENST00000610556 NDUFS7O75251 213 aa5.42□□□□□ -1.54
SYNPO2-206ENST00000610556 RAB9AP51151 201 aa5.42□□□□□ -1.54
SYNPO2-206ENST00000610556 MRPL51Q4U2R6 128 aaKnown RBP5.42□□□□□ -1.54
SYNPO2-206ENST00000610556 ZNF562Q6V9R5 426 aa5.42□□□□□ -1.54
SYNPO2-206ENST00000610556 LYPD1Q8N2G4 141 aa5.42□□□□□ -1.54
SYNPO2-206ENST00000610556 OR11H1Q8NG94 326 aa5.42□□□□□ -1.54
SYNPO2-206ENST00000610556 OR11H2Q8NH07 326 aa5.42□□□□□ -1.54
SYNPO2-206ENST00000610556 SCGB3A1Q96QR1 104 aa5.42□□□□□ -1.54
SYNPO2-206ENST00000610556 RNF5Q99942 180 aa5.42□□□□□ -1.54
SYNPO2-206ENST00000610556 KAAG1Q9UBP8 84 aa5.42□□□□□ -1.54
SYNPO2-206ENST00000610556 MYO9AB2RTY4 2548 aa5.42□□□□□ -1.54
SYNPO2-206ENST00000610556 TNRC6BQ9UPQ9 1833 aaKnown RBP5.42□□□□□ -1.54
SYNPO2-206ENST00000610556 CHD8Q9HCK8 2581 aa5.42□□□□□ -1.54
SYNPO2-206ENST00000610556 H3BRN7 92 aa5.42□□□□□ -1.54
SYNPO2-206ENST00000610556 K7EIM0 57 aa5.42□□□□□ -1.54
SYNPO2-206ENST00000610556 CEACAM4O75871 244 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms