RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 CENPWQ5EE01 88 aa13.63□□□□□ -0.23
VRK3-225ENST00000601912 RPS10P5Q9NQ39 176 aa13.63□□□□□ -0.23
VRK3-225ENST00000601912 LY96Q9Y6Y9 160 aa13.63□□□□□ -0.23
VRK3-225ENST00000601912 JMJD1CQ15652 2540 aa13.63□□□□□ -0.23
VRK3-225ENST00000601912 TRBV20OR9-2A0A075B6H5 130 aa13.63□□□□□ -0.23
VRK3-225ENST00000601912 TRAV34A0A0B4J273 112 aa13.63□□□□□ -0.23
VRK3-225ENST00000601912 C7orf77A4D0Y5 90 aa13.63□□□□□ -0.23
VRK3-225ENST00000601912 IGFL4Q6B9Z1 124 aa13.63□□□□□ -0.23
VRK3-225ENST00000601912 LCN12Q6JVE5 192 aa13.63□□□□□ -0.23
VRK3-225ENST00000601912 LINC01551Q86U37 167 aa13.63□□□□□ -0.23
VRK3-225ENST00000601912 MRPL53Q96EL3 112 aaKnown RBP13.63□□□□□ -0.23
VRK3-225ENST00000601912 NIPBLQ6KC79 2804 aaeCLIP13.63□□□□□ -0.23
VRK3-225ENST00000601912 IGKV3-7A0A075B6H7 116 aa13.62□□□□□ -0.23
VRK3-225ENST00000601912 ADARB2-AS1A8MUL3 147 aa13.62□□□□□ -0.23
VRK3-225ENST00000601912 ISLRO14498 428 aa13.62□□□□□ -0.23
VRK3-225ENST00000601912 SCO1O75880 301 aa13.62□□□□□ -0.23
VRK3-225ENST00000601912 OCC1Q8TAD7 63 aa13.62□□□□□ -0.23
VRK3-225ENST00000601912 MLXQ9UH92 298 aa13.62□□□□□ -0.23
VRK3-225ENST00000601912 TRAV8-2A0A0B4J237 113 aa13.61□□□□□ -0.23
VRK3-225ENST00000601912 BAGE2Q86Y30 109 aa13.61□□□□□ -0.23
VRK3-225ENST00000601912 RNF182Q8N6D2 247 aa13.61□□□□□ -0.23
VRK3-225ENST00000601912 TMEM75Q8N9X5 138 aa13.61□□□□□ -0.23
VRK3-225ENST00000601912 IGF2BP2-AS1Q96M15 143 aa13.61□□□□□ -0.23
VRK3-225ENST00000601912 PGPEP1LA6NFU8 196 aa13.6□□□□□ -0.23
VRK3-225ENST00000601912 OVOL1O14753 267 aa13.6□□□□□ -0.23
VRK3-225ENST00000601912 CSN3P07498 182 aa13.6□□□□□ -0.23
VRK3-225ENST00000601912 HLA-DMBP28068 263 aa13.6□□□□□ -0.23
VRK3-225ENST00000601912 SELENOKQ9Y6D0 94 aa13.6□□□□□ -0.23
VRK3-225ENST00000601912 FBLL1A6NHQ2 334 aaKnown RBP13.59□□□□□ -0.23
VRK3-225ENST00000601912 DNASE2O00115 360 aaPredicted RBP13.59□□□□□ -0.23
VRK3-225ENST00000601912 SOCS3O14543 225 aa13.59□□□□□ -0.23
VRK3-225ENST00000601912 ID1P41134 155 aa13.59□□□□□ -0.23
VRK3-225ENST00000601912 PAFAH1B2P68402 229 aa13.59□□□□□ -0.23
VRK3-225ENST00000601912 PSG3Q16557 428 aa13.59□□□□□ -0.23
VRK3-225ENST00000601912 ADAMTSL5Q6ZMM2 481 aa13.59□□□□□ -0.23
VRK3-225ENST00000601912 GBGT1Q8N5D6 347 aa13.59□□□□□ -0.23
VRK3-225ENST00000601912 DYNLRB2Q8TF09 96 aa13.59□□□□□ -0.23
VRK3-225ENST00000601912 SGK494Q96LW2 274 aa13.59□□□□□ -0.23
VRK3-225ENST00000601912 AURKAIP1Q9NWT8 199 aaPredicted RBP13.59□□□□□ -0.23
VRK3-225ENST00000601912 TRBV6-1A0A0K0K1D8 114 aa13.59□□□□□ -0.23
VRK3-225ENST00000601912 ZNF705FA8MVS1 300 aaPredicted RBP13.59□□□□□ -0.23
VRK3-225ENST00000601912 MT-ND4LP03901 98 aa13.59□□□□□ -0.23
VRK3-225ENST00000601912 SMIM12Q96EX1 92 aa13.59□□□□□ -0.23
VRK3-225ENST00000601912 TEP1Q99973 2627 aaKnown RBP13.59□□□□□ -0.23
VRK3-225ENST00000601912 MS4A6AQ9H2W1 248 aa13.59□□□□□ -0.23
VRK3-225ENST00000601912 A0A087WWC5 75 aa13.58□□□□□ -0.24
VRK3-225ENST00000601912 TRAV8-1A0A0A6YYK1 113 aa13.58□□□□□ -0.24
VRK3-225ENST00000601912 FLI1Q01543 452 aaPredicted RBP13.58□□□□□ -0.24
VRK3-225ENST00000601912 PRNTQ86SH4 94 aa13.58□□□□□ -0.24
VRK3-225ENST00000601912 MAST4O15021 2626 aa13.58□□□□□ -0.24
VRK3-225ENST00000601912 RBAKDNA6NC62 111 aa13.57□□□□□ -0.24
VRK3-225ENST00000601912 LTAP01374 205 aa13.57□□□□□ -0.24
VRK3-225ENST00000601912 IGLV2-11P01706 119 aa13.57□□□□□ -0.24
VRK3-225ENST00000601912 MGST1P10620 155 aaKnown RBP13.57□□□□□ -0.24
VRK3-225ENST00000601912 BTN1A1Q13410 526 aa13.57□□□□□ -0.24
VRK3-225ENST00000601912 RBPMS2Q6ZRY4 209 aaKnown RBP13.57□□□□□ -0.24
VRK3-225ENST00000601912 WFDC3Q8IUB2 231 aa13.57□□□□□ -0.24
VRK3-225ENST00000601912 ZNF738Q8NE65 137 aa13.57□□□□□ -0.24
VRK3-225ENST00000601912 DCANP1Q8TF63 244 aa13.57□□□□□ -0.24
VRK3-225ENST00000601912 ISOC2Q96AB3 205 aa13.57□□□□□ -0.24
VRK3-225ENST00000601912 PSG8Q9UQ74 426 aa13.57□□□□□ -0.24
VRK3-225ENST00000601912 IGKV2-40A0A087WW87 121 aaPredicted RBP13.56□□□□□ -0.24
VRK3-225ENST00000601912 TSPAN4O14817 238 aa13.56□□□□□ -0.24
VRK3-225ENST00000601912 IGKV2D-40P01614 121 aaPredicted RBP13.56□□□□□ -0.24
VRK3-225ENST00000601912 PF4P02776 101 aa13.56□□□□□ -0.24
VRK3-225ENST00000601912 RNF212Q495C1 297 aa13.56□□□□□ -0.24
VRK3-225ENST00000601912 Q86TA4 180 aa13.56□□□□□ -0.24
VRK3-225ENST00000601912 CTDSP1Q9GZU7 261 aa13.56□□□□□ -0.24
VRK3-225ENST00000601912 SIGLEC8Q9NYZ4 499 aa13.56□□□□□ -0.24
VRK3-225ENST00000601912 ZFP30Q9Y2G7 519 aa13.56□□□□□ -0.24
VRK3-225ENST00000601912 K7EN84 100 aa13.56□□□□□ -0.24
VRK3-225ENST00000601912 IGLV2-8P01709 118 aa13.56□□□□□ -0.24
VRK3-225ENST00000601912 TFPI2P48307 235 aa13.56□□□□□ -0.24
VRK3-225ENST00000601912 NHLRC2Q8NBF2 726 aa13.56□□□□□ -0.24
VRK3-225ENST00000601912 ANAPC16Q96DE5 110 aa13.56□□□□□ -0.24
VRK3-225ENST00000601912 C20orf173Q96LM9 149 aa13.56□□□□□ -0.24
VRK3-225ENST00000601912 CITED1Q99966 193 aa13.56□□□□□ -0.24
VRK3-225ENST00000601912 BIN3Q9NQY0 253 aa13.56□□□□□ -0.24
VRK3-225ENST00000601912 SMCO4Q9NRQ5 59 aa13.56□□□□□ -0.24
VRK3-225ENST00000601912 GCGP01275 180 aa13.55□□□□□ -0.24
VRK3-225ENST00000601912 PRB4P10163 310 aaPredicted RBP13.55□□□□□ -0.24
VRK3-225ENST00000601912 SNRPD3P62318 126 aaKnown RBP13.55□□□□□ -0.24
VRK3-225ENST00000601912 DEFB114Q30KQ6 69 aa13.55□□□□□ -0.24
VRK3-225ENST00000601912 TMEM88Q6PEY1 159 aa13.55□□□□□ -0.24
VRK3-225ENST00000601912 SFRP2Q96HF1 295 aa13.55□□□□□ -0.24
VRK3-225ENST00000601912 TMEM242Q9NWH2 141 aa13.55□□□□□ -0.24
VRK3-225ENST00000601912 WNK1Q9H4A3 2382 aa13.54□□□□□ -0.24
VRK3-225ENST00000601912 PRAC2D3DTV9 90 aa13.54□□□□□ -0.24
VRK3-225ENST00000601912 K7EQG2 157 aa13.54□□□□□ -0.24
VRK3-225ENST00000601912 PPP1R2P9O14990 202 aa13.54□□□□□ -0.24
VRK3-225ENST00000601912 KRTAP24-1Q3LI83 254 aa13.54□□□□□ -0.24
VRK3-225ENST00000601912 TMEM183AQ8IXX5 376 aa13.54□□□□□ -0.24
VRK3-225ENST00000601912 ERVFC1-1P60608 527 aa13.53□□□□□ -0.24
VRK3-225ENST00000601912 OR5I1Q13606 314 aa13.53□□□□□ -0.24
VRK3-225ENST00000601912 SAPCD1Q5SSQ6 148 aa13.53□□□□□ -0.24
VRK3-225ENST00000601912 CBLN2Q8IUK8 224 aa13.53□□□□□ -0.24
VRK3-225ENST00000601912 C15orf54Q8N8G6 183 aa13.53□□□□□ -0.24
VRK3-225ENST00000601912 VGLL1Q99990 258 aa13.53□□□□□ -0.24
VRK3-225ENST00000601912 MLST8Q9BVC4 326 aa13.53□□□□□ -0.24
VRK3-225ENST00000601912 TRAV2A0A0B4J234 112 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms