RNA–Protein interactions for RNA: ENST00000592960.1

PKN1-215, Transcript of protein kinase N1, human

TSL 3

Gene PKN1, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKN1-215	ENST00000592960	YTHDF2	Q9Y5A9	579 aa	Known RBP	11.25	□□□□□ -0.61
PKN1-215	ENST00000592960		A0A1W2PRE2	83 aa		11.24	□□□□□ -0.61
PKN1-215	ENST00000592960	C2orf70	A6NJV1	201 aa		11.24	□□□□□ -0.61
PKN1-215	ENST00000592960	C11orf94	C9JXX5	98 aa		11.24	□□□□□ -0.61
PKN1-215	ENST00000592960		H3BQ15	152 aa		11.24	□□□□□ -0.61
PKN1-215	ENST00000592960	EDN2	P20800	178 aa		11.24	□□□□□ -0.61
PKN1-215	ENST00000592960	MEF2B	Q02080	365 aa	Predicted RBP	11.24	□□□□□ -0.61
PKN1-215	ENST00000592960	LINC00322	Q6ZN03	302 aa	Predicted RBP	11.24	□□□□□ -0.61
PKN1-215	ENST00000592960	TRBV19	A0A075B6N1	114 aa		11.23	□□□□□ -0.61
PKN1-215	ENST00000592960		A0A087X0K7	114 aa		11.23	□□□□□ -0.61
PKN1-215	ENST00000592960	HELT	A6NFD8	242 aa		11.23	□□□□□ -0.61
PKN1-215	ENST00000592960	ATP5G3	P48201	142 aa		11.23	□□□□□ -0.61
PKN1-215	ENST00000592960	RAN	P62826	216 aa	Known RBP	11.23	□□□□□ -0.61
PKN1-215	ENST00000592960	PDE6H	Q13956	83 aa		11.23	□□□□□ -0.61
PKN1-215	ENST00000592960	NKX6-2	Q9C056	277 aa	Predicted RBP	11.23	□□□□□ -0.61
PKN1-215	ENST00000592960	TUBA4B	Q9H853	241 aa		11.23	□□□□□ -0.61
PKN1-215	ENST00000592960	SIGLEC8	Q9NYZ4	499 aa		11.23	□□□□□ -0.61
PKN1-215	ENST00000592960	FOLR2	P14207	255 aa		11.22	□□□□□ -0.61
PKN1-215	ENST00000592960	CBLN1	P23435	193 aa		11.22	□□□□□ -0.61
PKN1-215	ENST00000592960	MEOX2	P50222	304 aa		11.22	□□□□□ -0.61
PKN1-215	ENST00000592960	PSG9	Q00887	426 aa		11.22	□□□□□ -0.61
PKN1-215	ENST00000592960	C17orf77	Q96MU5	243 aa		11.22	□□□□□ -0.61
PKN1-215	ENST00000592960		Q9H3A6	140 aa		11.22	□□□□□ -0.61
PKN1-215	ENST00000592960		F6UZH7	168 aa		11.21	□□□□□ -0.61
PKN1-215	ENST00000592960	ZNF253	O75346	499 aa		11.21	□□□□□ -0.61
PKN1-215	ENST00000592960	ATP6V1G1	O75348	118 aa		11.21	□□□□□ -0.61
PKN1-215	ENST00000592960	NDUFS6	O75380	124 aa	Known RBP	11.21	□□□□□ -0.61
PKN1-215	ENST00000592960	SRP19	P09132	144 aa	Known RBP	11.21	□□□□□ -0.61
PKN1-215	ENST00000592960	CD81	P60033	236 aa		11.21	□□□□□ -0.61
PKN1-215	ENST00000592960	RPL11	P62913	178 aa	Known RBP	11.21	□□□□□ -0.61
PKN1-215	ENST00000592960	SUMO1	P63165	101 aa	Known RBP	11.21	□□□□□ -0.61
PKN1-215	ENST00000592960	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		11.21	□□□□□ -0.61
PKN1-215	ENST00000592960	TCF24	Q7RTU0	167 aa		11.21	□□□□□ -0.61
PKN1-215	ENST00000592960	LYPD1	Q8N2G4	141 aa		11.21	□□□□□ -0.61
PKN1-215	ENST00000592960	SLC35B3	Q9H1N7	401 aa		11.21	□□□□□ -0.61
PKN1-215	ENST00000592960	OTOR	Q9NRC9	128 aa		11.21	□□□□□ -0.61
PKN1-215	ENST00000592960	PGP	A6NDG6	321 aa		11.2	□□□□□ -0.62
PKN1-215	ENST00000592960	GGTLC3	B5MD39	225 aa		11.2	□□□□□ -0.62
PKN1-215	ENST00000592960		C9JQL5	133 aa		11.2	□□□□□ -0.62
PKN1-215	ENST00000592960	SLC17A3	O00476	420 aa		11.2	□□□□□ -0.62
PKN1-215	ENST00000592960	PDE6D	O43924	150 aa		11.2	□□□□□ -0.62
PKN1-215	ENST00000592960	NDUFB4	O95168	129 aa		11.2	□□□□□ -0.62
PKN1-215	ENST00000592960	CSN3	P07498	182 aa		11.2	□□□□□ -0.62
PKN1-215	ENST00000592960	SFTA3	P0C7M3	94 aa		11.2	□□□□□ -0.62
PKN1-215	ENST00000592960	CEBPG	P53567	150 aa		11.2	□□□□□ -0.62
PKN1-215	ENST00000592960	GTSCR1	Q86UQ5	136 aa		11.2	□□□□□ -0.62
PKN1-215	ENST00000592960	DYNLRB2	Q8TF09	96 aa		11.2	□□□□□ -0.62
PKN1-215	ENST00000592960	SLC50A1	Q9BRV3	221 aa		11.2	□□□□□ -0.62
PKN1-215	ENST00000592960	AAMDC	Q9H7C9	122 aa		11.2	□□□□□ -0.62
PKN1-215	ENST00000592960	RYR1	P21817	5038 aa		11.19	□□□□□ -0.62
PKN1-215	ENST00000592960	TMEM218	A2RU14	115 aa		11.19	□□□□□ -0.62
PKN1-215	ENST00000592960	SLC25A5	P05141	298 aa	Known RBP	11.19	□□□□□ -0.62
PKN1-215	ENST00000592960	CCDC28A	Q8IWP9	274 aa		11.19	□□□□□ -0.62
PKN1-215	ENST00000592960	MLX	Q9UH92	298 aa		11.19	□□□□□ -0.62
PKN1-215	ENST00000592960	SELENOK	Q9Y6D0	94 aa		11.19	□□□□□ -0.62
PKN1-215	ENST00000592960	IGKV3-7	A0A075B6H7	116 aa		11.18	□□□□□ -0.62
PKN1-215	ENST00000592960	TMEM250	H0YL14	139 aa		11.18	□□□□□ -0.62
PKN1-215	ENST00000592960	LCN12	Q6JVE5	192 aa		11.18	□□□□□ -0.62
PKN1-215	ENST00000592960	EXOC3-AS1	Q8N2X6	119 aa		11.18	□□□□□ -0.62
PKN1-215	ENST00000592960	CYB561D1	Q8N8Q1	229 aa		11.18	□□□□□ -0.62
PKN1-215	ENST00000592960	C5orf17	Q8NAS9	161 aa		11.18	□□□□□ -0.62
PKN1-215	ENST00000592960	CMTM2	Q8TAZ6	248 aa		11.18	□□□□□ -0.62
PKN1-215	ENST00000592960	C16orf92	Q96LL3	132 aa		11.18	□□□□□ -0.62
PKN1-215	ENST00000592960	TCEAL7	Q9BRU2	100 aa		11.18	□□□□□ -0.62
PKN1-215	ENST00000592960	RETN	Q9HD89	108 aa		11.18	□□□□□ -0.62
PKN1-215	ENST00000592960	NRN1	Q9NPD7	142 aa		11.18	□□□□□ -0.62
PKN1-215	ENST00000592960	ZNF331	Q9NQX6	463 aa	Predicted RBP	11.18	□□□□□ -0.62
PKN1-215	ENST00000592960	PCLO	Q9Y6V0	5065 aa		11.17	□□□□□ -0.62
PKN1-215	ENST00000592960	SCO2	A0A1W2PP80	73 aa		11.17	□□□□□ -0.62
PKN1-215	ENST00000592960	KRBOX1	C9JBD0	128 aa		11.17	□□□□□ -0.62
PKN1-215	ENST00000592960		F8W036	122 aa		11.17	□□□□□ -0.62
PKN1-215	ENST00000592960	FAM90A2P	Q658T7	463 aa		11.17	□□□□□ -0.62
PKN1-215	ENST00000592960	OR2K2	Q8NGT1	345 aa		11.17	□□□□□ -0.62
PKN1-215	ENST00000592960	RPH3AL	Q9UNE2	315 aa		11.17	□□□□□ -0.62
PKN1-215	ENST00000592960	HECTD4	Q9Y4D8	3996 aa		11.17	□□□□□ -0.62
PKN1-215	ENST00000592960	IZUMO1R	A6ND01	250 aa		11.16	□□□□□ -0.62
PKN1-215	ENST00000592960	DNASE2	O00115	360 aa	Predicted RBP	11.16	□□□□□ -0.62
PKN1-215	ENST00000592960	AKR1C3	P42330	323 aa		11.16	□□□□□ -0.62
PKN1-215	ENST00000592960	CSN1S1	P47710	185 aa		11.16	□□□□□ -0.62
PKN1-215	ENST00000592960	GNG5	P63218	68 aa		11.16	□□□□□ -0.62
PKN1-215	ENST00000592960	PAFAH1B2	P68402	229 aa		11.16	□□□□□ -0.62
PKN1-215	ENST00000592960	SOHLH1	Q5JUK2	328 aa		11.16	□□□□□ -0.62
PKN1-215	ENST00000592960	SAMD13	Q5VXD3	122 aa		11.16	□□□□□ -0.62
PKN1-215	ENST00000592960	RBPMS2	Q6ZRY4	209 aa	Known RBP	11.16	□□□□□ -0.62
PKN1-215	ENST00000592960	LINC00476	Q8WZB0	136 aa		11.16	□□□□□ -0.62
PKN1-215	ENST00000592960	HIST1H2BA	Q96A08	127 aa		11.16	□□□□□ -0.62
PKN1-215	ENST00000592960	C11orf52	Q96A22	123 aa		11.16	□□□□□ -0.62
PKN1-215	ENST00000592960	RPUSD4	Q96CM3	377 aa	Known RBP	11.16	□□□□□ -0.62
PKN1-215	ENST00000592960	LINC00052	Q96N35	136 aa		11.16	□□□□□ -0.62
PKN1-215	ENST00000592960	CLEC5A	Q9NY25	188 aa		11.16	□□□□□ -0.62
PKN1-215	ENST00000592960	EPDR1	Q9UM22	224 aa		11.16	□□□□□ -0.62
PKN1-215	ENST00000592960	PEX7	O00628	323 aa		11.15	□□□□□ -0.62
PKN1-215	ENST00000592960	S100A1	P23297	94 aa		11.15	□□□□□ -0.62
PKN1-215	ENST00000592960	ZNF674	Q2M3X9	581 aa		11.15	□□□□□ -0.62
PKN1-215	ENST00000592960	IGFL4	Q6B9Z1	124 aa		11.15	□□□□□ -0.62
PKN1-215	ENST00000592960	WFDC3	Q8IUB2	231 aa		11.15	□□□□□ -0.62
PKN1-215	ENST00000592960	GBGT1	Q8N5D6	347 aa		11.15	□□□□□ -0.62
PKN1-215	ENST00000592960	FAM110A	Q9BQ89	295 aa		11.15	□□□□□ -0.62
PKN1-215	ENST00000592960	SEC11C	Q9BY50	192 aa		11.15	□□□□□ -0.62
PKN1-215	ENST00000592960	MS4A6A	Q9H2W1	248 aa		11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms