RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 C12orf57Q99622 126 aa8.03□□□□□ -1.12
VPS25-203ENST00000589520 MRPL18Q9H0U6 180 aaKnown RBP8.03□□□□□ -1.12
VPS25-203ENST00000589520 VPREB3Q9UKI3 123 aa8.03□□□□□ -1.12
VPS25-203ENST00000589520 SMAD5-AS1Q9Y6J3 95 aa8.03□□□□□ -1.12
VPS25-203ENST00000589520 ABCA2Q9BZC7 2435 aa8.02□□□□□ -1.13
VPS25-203ENST00000589520 HRNRQ86YZ3 2850 aaPredicted RBP8.02□□□□□ -1.13
VPS25-203ENST00000589520 A0A1B0GW15 77 aa8.02□□□□□ -1.13
VPS25-203ENST00000589520 CLPSL1A2RUU4 121 aa8.02□□□□□ -1.13
VPS25-203ENST00000589520 K7EMT4 169 aa8.02□□□□□ -1.13
VPS25-203ENST00000589520 IGHG4P01861 327 aa8.02□□□□□ -1.13
VPS25-203ENST00000589520 PF4V1P10720 104 aa8.02□□□□□ -1.13
VPS25-203ENST00000589520 BMI1P35226 326 aa8.02□□□□□ -1.13
VPS25-203ENST00000589520 KRTAP10-9P60411 292 aa8.02□□□□□ -1.13
VPS25-203ENST00000589520 RPS20P60866 119 aaKnown RBP8.02□□□□□ -1.13
VPS25-203ENST00000589520 SLC35B1P78383 322 aa8.02□□□□□ -1.13
VPS25-203ENST00000589520 S100A12P80511 92 aa8.02□□□□□ -1.13
VPS25-203ENST00000589520 SRSF2Q01130 221 aaKnown RBP8.02□□□□□ -1.13
VPS25-203ENST00000589520 SAMD13Q5VXD3 122 aa8.02□□□□□ -1.13
VPS25-203ENST00000589520 TMEM86BQ8N661 226 aa8.02□□□□□ -1.13
VPS25-203ENST00000589520 NUP35Q8NFH5 326 aa8.02□□□□□ -1.13
VPS25-203ENST00000589520 TMEM18Q96B42 140 aa8.02□□□□□ -1.13
VPS25-203ENST00000589520 Q96MF0 132 aa8.02□□□□□ -1.13
VPS25-203ENST00000589520 NDFIP1Q9BT67 221 aa8.02□□□□□ -1.13
VPS25-203ENST00000589520 NIPBLQ6KC79 2804 aaeCLIP8.02□□□□□ -1.13
VPS25-203ENST00000589520 APCP25054 2843 aa8.01□□□□□ -1.13
VPS25-203ENST00000589520 ELANEP08246 267 aa8.01□□□□□ -1.13
VPS25-203ENST00000589520 CRISP2P16562 243 aa8.01□□□□□ -1.13
VPS25-203ENST00000589520 CBLN1P23435 193 aa8.01□□□□□ -1.13
VPS25-203ENST00000589520 PAFAH1B2P68402 229 aa8.01□□□□□ -1.13
VPS25-203ENST00000589520 OR10J3Q5JRS4 329 aa8.01□□□□□ -1.13
VPS25-203ENST00000589520 LCN12Q6JVE5 192 aa8.01□□□□□ -1.13
VPS25-203ENST00000589520 TMEM136Q6ZRR5 245 aa8.01□□□□□ -1.13
VPS25-203ENST00000589520 RBPMS2Q6ZRY4 209 aaKnown RBP8.01□□□□□ -1.13
VPS25-203ENST00000589520 BCL6BQ8N143 479 aaPredicted RBP8.01□□□□□ -1.13
VPS25-203ENST00000589520 OR4X2Q8NGF9 303 aa8.01□□□□□ -1.13
VPS25-203ENST00000589520 PACRGQ96M98 296 aaPredicted RBP8.01□□□□□ -1.13
VPS25-203ENST00000589520 NEU1Q99519 415 aa8.01□□□□□ -1.13
VPS25-203ENST00000589520 GPR61Q9BZJ8 451 aa8.01□□□□□ -1.13
VPS25-203ENST00000589520 NPFFR1Q9GZQ6 430 aa8.01□□□□□ -1.13
VPS25-203ENST00000589520 PPP1R14DQ9NXH3 145 aa8.01□□□□□ -1.13
VPS25-203ENST00000589520 CSMD2Q7Z408 3487 aa8.01□□□□□ -1.13
VPS25-203ENST00000589520 ABCA1O95477 2261 aa8□□□□□ -1.13
VPS25-203ENST00000589520 HIGD1CA8MV81 97 aa8□□□□□ -1.13
VPS25-203ENST00000589520 CHEK1O14757 476 aa8□□□□□ -1.13
VPS25-203ENST00000589520 IGHV4-59P01825 116 aa8□□□□□ -1.13
VPS25-203ENST00000589520 APCSP02743 223 aa8□□□□□ -1.13
VPS25-203ENST00000589520 ESDP10768 282 aa8□□□□□ -1.13
VPS25-203ENST00000589520 FOXE3Q13461 319 aa8□□□□□ -1.13
VPS25-203ENST00000589520 FAM106AQ4KMX7 169 aa8□□□□□ -1.13
VPS25-203ENST00000589520 FAM162BQ5T6X4 162 aa8□□□□□ -1.13
VPS25-203ENST00000589520 DMRTA1Q5VZB9 504 aa8□□□□□ -1.13
VPS25-203ENST00000589520 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8□□□□□ -1.13
VPS25-203ENST00000589520 GPHB5Q86YW7 130 aa8□□□□□ -1.13
VPS25-203ENST00000589520 SGK494Q96LW2 274 aa8□□□□□ -1.13
VPS25-203ENST00000589520 PEF1Q9UBV8 284 aaKnown RBP8□□□□□ -1.13
VPS25-203ENST00000589520 LINC00527Q9UJ94 153 aa8□□□□□ -1.13
VPS25-203ENST00000589520 AKAP6Q13023 2319 aa8□□□□□ -1.13
VPS25-203ENST00000589520 AKAP9Q99996 3911 aa7.99□□□□□ -1.13
VPS25-203ENST00000589520 TRAV8-1A0A0A6YYK1 113 aa7.99□□□□□ -1.13
VPS25-203ENST00000589520 IFITM10A6NMD0 228 aa7.99□□□□□ -1.13
VPS25-203ENST00000589520 A8MWP6 167 aa7.99□□□□□ -1.13
VPS25-203ENST00000589520 M0R3E3 92 aa7.99□□□□□ -1.13
VPS25-203ENST00000589520 PSMB8P28062 276 aa7.99□□□□□ -1.13
VPS25-203ENST00000589520 TCL1AP56279 114 aa7.99□□□□□ -1.13
VPS25-203ENST00000589520 RAB4BP61018 213 aa7.99□□□□□ -1.13
VPS25-203ENST00000589520 HBBP68871 147 aa7.99□□□□□ -1.13
VPS25-203ENST00000589520 RIGQ13278 110 aa7.99□□□□□ -1.13
VPS25-203ENST00000589520 OR2D3Q8NGH3 330 aa7.99□□□□□ -1.13
VPS25-203ENST00000589520 GLMPQ8WWB7 406 aa7.99□□□□□ -1.13
VPS25-203ENST00000589520 BORCS7Q96B45 105 aa7.99□□□□□ -1.13
VPS25-203ENST00000589520 NOL4LQ96MY1 436 aaPredicted RBP7.99□□□□□ -1.13
VPS25-203ENST00000589520 PRR25Q96S07 402 aa7.99□□□□□ -1.13
VPS25-203ENST00000589520 HIST1H2BLQ99880 126 aa7.99□□□□□ -1.13
VPS25-203ENST00000589520 LENEPQ9Y5L5 61 aa7.99□□□□□ -1.13
VPS25-203ENST00000589520 IGHV3-35A0A0C4DH35 117 aa7.98□□□□□ -1.13
VPS25-203ENST00000589520 A0A1B0GXF2 115 aa7.98□□□□□ -1.13
VPS25-203ENST00000589520 HAX1O00165 279 aa7.98□□□□□ -1.13
VPS25-203ENST00000589520 CA1P00915 261 aaPredicted RBP7.98□□□□□ -1.13
VPS25-203ENST00000589520 FABP4P15090 132 aa7.98□□□□□ -1.13
VPS25-203ENST00000589520 GFI1BQ5VTD9 330 aa7.98□□□□□ -1.13
VPS25-203ENST00000589520 MRPL54Q6P161 138 aaKnown RBP7.98□□□□□ -1.13
VPS25-203ENST00000589520 LINC00322Q6ZN03 302 aaPredicted RBP7.98□□□□□ -1.13
VPS25-203ENST00000589520 KRTAP1-3Q8IUG1 177 aa7.98□□□□□ -1.13
VPS25-203ENST00000589520 OR10D4PQ8NGN7 298 aa7.98□□□□□ -1.13
VPS25-203ENST00000589520 ZC2HC1AQ96GY0 325 aa7.98□□□□□ -1.13
VPS25-203ENST00000589520 UFC1Q9Y3C8 167 aa7.98□□□□□ -1.13
VPS25-203ENST00000589520 TMEM189A5PLL7 270 aa7.97□□□□□ -1.13
VPS25-203ENST00000589520 FABP5P3A8MUU1 101 aa7.97□□□□□ -1.13
VPS25-203ENST00000589520 OVOL1O14753 267 aa7.97□□□□□ -1.13
VPS25-203ENST00000589520 SCGB2A2Q13296 93 aa7.97□□□□□ -1.13
VPS25-203ENST00000589520 KLF5Q13887 457 aaPredicted RBP7.97□□□□□ -1.13
VPS25-203ENST00000589520 BAGE3Q86Y29 109 aa7.97□□□□□ -1.13
VPS25-203ENST00000589520 Q8N2B8 174 aa7.97□□□□□ -1.13
VPS25-203ENST00000589520 RNF152Q8N8N0 203 aa7.97□□□□□ -1.13
VPS25-203ENST00000589520 GATD1Q8NB37 220 aa7.97□□□□□ -1.13
VPS25-203ENST00000589520 C16orf92Q96LL3 132 aa7.97□□□□□ -1.13
VPS25-203ENST00000589520 ASCL2Q99929 193 aa7.97□□□□□ -1.13
VPS25-203ENST00000589520 FOXC2Q99958 501 aa7.97□□□□□ -1.13
VPS25-203ENST00000589520 KLK15Q9H2R5 256 aa7.97□□□□□ -1.13
VPS25-203ENST00000589520 DAZ1Q9NQZ3 744 aaKnown RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms