RNA–Protein interactions for RNA: ENST00000589146.5

CAPNS1-207, Transcript of calpain small subunit 1, humanhuman

TSL 3 BASIC

Gene CAPNS1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-207ENST00000589146 PFN1P07737 140 aaKnown RBP17.31■□□□□ 0.36
CAPNS1-207ENST00000589146 ELOBQ15370 118 aa17.31■□□□□ 0.36
CAPNS1-207ENST00000589146 PSG3Q16557 428 aa17.31■□□□□ 0.36
CAPNS1-207ENST00000589146 C18orf65Q6ZTR6 163 aa17.31■□□□□ 0.36
CAPNS1-207ENST00000589146 Q71RC1 249 aaPredicted RBP17.31■□□□□ 0.36
CAPNS1-207ENST00000589146 Q86TA4 180 aa17.31■□□□□ 0.36
CAPNS1-207ENST00000589146 TCF21O43680 179 aa17.3■□□□□ 0.36
CAPNS1-207ENST00000589146 FAM231DQ6ZW35 169 aa17.3■□□□□ 0.36
CAPNS1-207ENST00000589146 FAM24BQ8N5W8 94 aa17.3■□□□□ 0.36
CAPNS1-207ENST00000589146 SOCS3O14543 225 aa17.29■□□□□ 0.36
CAPNS1-207ENST00000589146 FLI1Q01543 452 aaPredicted RBP17.29■□□□□ 0.36
CAPNS1-207ENST00000589146 OR5I1Q13606 314 aa17.29■□□□□ 0.36
CAPNS1-207ENST00000589146 LCN12Q6JVE5 192 aa17.29■□□□□ 0.36
CAPNS1-207ENST00000589146 TMEM183AQ8IXX5 376 aa17.29■□□□□ 0.36
CAPNS1-207ENST00000589146 OR1N2Q8NGR9 330 aa17.29■□□□□ 0.36
CAPNS1-207ENST00000589146 BIN3Q9NQY0 253 aa17.29■□□□□ 0.36
CAPNS1-207ENST00000589146 PSG8Q9UQ74 426 aa17.29■□□□□ 0.36
CAPNS1-207ENST00000589146 ZFP30Q9Y2G7 519 aa17.29■□□□□ 0.36
CAPNS1-207ENST00000589146 HLA-DMBP28068 263 aa17.28■□□□□ 0.36
CAPNS1-207ENST00000589146 SYNJ2BPP57105 145 aa17.28■□□□□ 0.36
CAPNS1-207ENST00000589146 PYGO2Q9BRQ0 406 aa17.28■□□□□ 0.36
CAPNS1-207ENST00000589146 MTORP42345 2549 aa17.28■□□□□ 0.36
CAPNS1-207ENST00000589146 TRBV24-1A0A075B6N3 115 aa17.27■□□□□ 0.36
CAPNS1-207ENST00000589146 TRAV8-1A0A0A6YYK1 113 aa17.27■□□□□ 0.36
CAPNS1-207ENST00000589146 RBAKDNA6NC62 111 aa17.27■□□□□ 0.36
CAPNS1-207ENST00000589146 MGST1P10620 155 aaKnown RBP17.27■□□□□ 0.36
CAPNS1-207ENST00000589146 CD28P10747 220 aa17.27■□□□□ 0.36
CAPNS1-207ENST00000589146 FOLR2P14207 255 aa17.27■□□□□ 0.36
CAPNS1-207ENST00000589146 PROK1P58294 105 aa17.27■□□□□ 0.36
CAPNS1-207ENST00000589146 ERVFC1-1P60608 527 aa17.27■□□□□ 0.36
CAPNS1-207ENST00000589146 SAMD13Q5VXD3 122 aa17.27■□□□□ 0.36
CAPNS1-207ENST00000589146 IGFL4Q6B9Z1 124 aa17.27■□□□□ 0.36
CAPNS1-207ENST00000589146 KLHL30-AS1Q8NEE0 82 aa17.27■□□□□ 0.36
CAPNS1-207ENST00000589146 SGK494Q96LW2 274 aa17.27■□□□□ 0.36
CAPNS1-207ENST00000589146 NRN1Q9NPD7 142 aa17.27■□□□□ 0.36
CAPNS1-207ENST00000589146 ZNF492Q9P255 531 aa17.27■□□□□ 0.36
CAPNS1-207ENST00000589146 FOXL1Q12952 345 aa17.26■□□□□ 0.35
CAPNS1-207ENST00000589146 COX8CQ7Z4L0 72 aa17.26■□□□□ 0.35
CAPNS1-207ENST00000589146 PRNTQ86SH4 94 aa17.26■□□□□ 0.35
CAPNS1-207ENST00000589146 OR11H1Q8NG94 326 aa17.26■□□□□ 0.35
CAPNS1-207ENST00000589146 DPF1Q92782 380 aa17.26■□□□□ 0.35
CAPNS1-207ENST00000589146 V9GYV3 84 aa17.26■□□□□ 0.35
CAPNS1-207ENST00000589146 C2orf70A6NJV1 201 aa17.25■□□□□ 0.35
CAPNS1-207ENST00000589146 RAB5AP20339 215 aa17.25■□□□□ 0.35
CAPNS1-207ENST00000589146 EDN2P20800 178 aa17.25■□□□□ 0.35
CAPNS1-207ENST00000589146 S100PP25815 95 aa17.25■□□□□ 0.35
CAPNS1-207ENST00000589146 TCF24Q7RTU0 167 aa17.25■□□□□ 0.35
CAPNS1-207ENST00000589146 NHLRC2Q8NBF2 726 aa17.25■□□□□ 0.35
CAPNS1-207ENST00000589146 C16orf92Q96LL3 132 aa17.25■□□□□ 0.35
CAPNS1-207ENST00000589146 RNF114Q9Y508 228 aa17.25■□□□□ 0.35
CAPNS1-207ENST00000589146 TSSC4Q9Y5U2 329 aaPredicted RBP17.25■□□□□ 0.35
CAPNS1-207ENST00000589146 CXCL1P09341 107 aa17.24■□□□□ 0.35
CAPNS1-207ENST00000589146 SLURP1P55000 103 aa17.24■□□□□ 0.35
CAPNS1-207ENST00000589146 DEFB136Q30KP8 78 aa17.24■□□□□ 0.35
CAPNS1-207ENST00000589146 KHDC1LQ5JSQ8 128 aa17.24■□□□□ 0.35
CAPNS1-207ENST00000589146 IBA57Q5T440 356 aaKnown RBP17.24■□□□□ 0.35
CAPNS1-207ENST00000589146 IL36BQ9NZH7 164 aa17.24■□□□□ 0.35
CAPNS1-207ENST00000589146 MLXQ9UH92 298 aa17.24■□□□□ 0.35
CAPNS1-207ENST00000589146 URGCP-MRPS24S4R325 110 aa17.24■□□□□ 0.35
CAPNS1-207ENST00000589146 HIVEP1P15822 2718 aa17.24■□□□□ 0.35
CAPNS1-207ENST00000589146 IGKV2-40A0A087WW87 121 aaPredicted RBP17.23■□□□□ 0.35
CAPNS1-207ENST00000589146 TGIF2-C20orf24A0A0A6YYL0 155 aa17.23■□□□□ 0.35
CAPNS1-207ENST00000589146 ZNF705FA8MVS1 300 aaPredicted RBP17.23■□□□□ 0.35
CAPNS1-207ENST00000589146 IGKV2D-40P01614 121 aaPredicted RBP17.23■□□□□ 0.35
CAPNS1-207ENST00000589146 CBLN1P23435 193 aa17.23■□□□□ 0.35
CAPNS1-207ENST00000589146 FHL3Q13643 280 aa17.23■□□□□ 0.35
CAPNS1-207ENST00000589146 KCNIP4Q6PIL6 250 aa17.23■□□□□ 0.35
CAPNS1-207ENST00000589146 RNF182Q8N6D2 247 aa17.23■□□□□ 0.35
CAPNS1-207ENST00000589146 RNASE7Q9H1E1 156 aaKnown RBP17.23■□□□□ 0.35
CAPNS1-207ENST00000589146 TRAV9-1A0A075B6T8 112 aa17.22■□□□□ 0.35
CAPNS1-207ENST00000589146 C19orf71A6NCJ1 209 aa17.22■□□□□ 0.35
CAPNS1-207ENST00000589146 SAPCD1Q5SSQ6 148 aa17.22■□□□□ 0.35
CAPNS1-207ENST00000589146 NUDT10Q8NFP7 164 aa17.22■□□□□ 0.35
CAPNS1-207ENST00000589146 NUDT11Q96G61 164 aa17.22■□□□□ 0.35
CAPNS1-207ENST00000589146 CITED2Q99967 270 aaPredicted RBP17.22■□□□□ 0.35
CAPNS1-207ENST00000589146 PEMTQ9UBM1 199 aa17.22■□□□□ 0.35
CAPNS1-207ENST00000589146 TMA7Q9Y2S6 64 aaKnown RBP17.22■□□□□ 0.35
CAPNS1-207ENST00000589146 PRAC2D3DTV9 90 aa17.21■□□□□ 0.35
CAPNS1-207ENST00000589146 ADAMTSL5Q6ZMM2 481 aa17.21■□□□□ 0.35
CAPNS1-207ENST00000589146 BTF3L4Q96K17 158 aa17.21■□□□□ 0.35
CAPNS1-207ENST00000589146 C20orf173Q96LM9 149 aa17.21■□□□□ 0.35
CAPNS1-207ENST00000589146 PPP1R14DQ9NXH3 145 aa17.21■□□□□ 0.35
CAPNS1-207ENST00000589146 M0QZ24 198 aa17.2■□□□□ 0.34
CAPNS1-207ENST00000589146 OR9G4Q8NGQ1 327 aa17.2■□□□□ 0.34
CAPNS1-207ENST00000589146 RAX2Q96IS3 184 aa17.2■□□□□ 0.34
CAPNS1-207ENST00000589146 FAM210BQ96KR6 192 aa17.2■□□□□ 0.34
CAPNS1-207ENST00000589146 VGLL1Q99990 258 aa17.2■□□□□ 0.34
CAPNS1-207ENST00000589146 GATCO43716 136 aaKnown RBP17.19■□□□□ 0.34
CAPNS1-207ENST00000589146 C9orf47Q6ZRZ4 202 aa17.19■□□□□ 0.34
CAPNS1-207ENST00000589146 DCANP1Q8TF63 244 aa17.19■□□□□ 0.34
CAPNS1-207ENST00000589146 DLX4Q92988 240 aaPredicted RBP17.19■□□□□ 0.34
CAPNS1-207ENST00000589146 PRR25Q96S07 402 aa17.19■□□□□ 0.34
CAPNS1-207ENST00000589146 FN1P02751 2386 aaKnown RBP17.18■□□□□ 0.34
CAPNS1-207ENST00000589146 A0A1B0GUS0 222 aa17.18■□□□□ 0.34
CAPNS1-207ENST00000589146 NPIPB6E9PJ23 425 aa17.18■□□□□ 0.34
CAPNS1-207ENST00000589146 HAX1O00165 279 aa17.18■□□□□ 0.34
CAPNS1-207ENST00000589146 OVOL1O14753 267 aa17.18■□□□□ 0.34
CAPNS1-207ENST00000589146 TYMSP04818 313 aa17.18■□□□□ 0.34
CAPNS1-207ENST00000589146 RPL11P62913 178 aaKnown RBP17.18■□□□□ 0.34
CAPNS1-207ENST00000589146 CT83Q5H943 113 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms