RNA–Protein interactions for RNA: ENST00000586569.2

TNFRSF11A-202, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 8,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-202ENST00000586569 RMI2Q96E14 147 aa11.94□□□□□ -0.5
TNFRSF11A-202ENST00000586569 TRAV3A0A0B4J244 114 aa11.94□□□□□ -0.5
TNFRSF11A-202ENST00000586569 A0A1B0GTI1 187 aa11.94□□□□□ -0.5
TNFRSF11A-202ENST00000586569 ID3Q02535 119 aa11.94□□□□□ -0.5
TNFRSF11A-202ENST00000586569 C8orf49Q96NF6 230 aa11.94□□□□□ -0.5
TNFRSF11A-202ENST00000586569 RHODO00212 210 aa11.94□□□□□ -0.5
TNFRSF11A-202ENST00000586569 GAGE7O76087 117 aa11.94□□□□□ -0.5
TNFRSF11A-202ENST00000586569 GAGE12FP0CL80 117 aa11.94□□□□□ -0.5
TNFRSF11A-202ENST00000586569 GAGE12GP0CL81 117 aa11.94□□□□□ -0.5
TNFRSF11A-202ENST00000586569 GAGE12IP0CL82 117 aa11.94□□□□□ -0.5
TNFRSF11A-202ENST00000586569 ETDBQ3ZM63 59 aa11.94□□□□□ -0.5
TNFRSF11A-202ENST00000586569 LY6G6FQ5SQ64 297 aa11.94□□□□□ -0.5
TNFRSF11A-202ENST00000586569 HLA-DRB4P13762 266 aa11.94□□□□□ -0.5
TNFRSF11A-202ENST00000586569 RFNGQ9Y644 331 aa11.94□□□□□ -0.5
TNFRSF11A-202ENST00000586569 HLA-DRB4X5D2U9 266 aa11.94□□□□□ -0.5
TNFRSF11A-202ENST00000586569 MINOS1Q5TGZ0 78 aa11.93□□□□□ -0.5
TNFRSF11A-202ENST00000586569 MINOS1-NBL1R4GNA1 71 aa11.93□□□□□ -0.5
TNFRSF11A-202ENST00000586569 NRXN3Q9Y4C0 1643 aa11.93□□□□□ -0.5
TNFRSF11A-202ENST00000586569 GAGE12HA6NDE8 117 aa11.93□□□□□ -0.5
TNFRSF11A-202ENST00000586569 C1orf53Q5VUE5 145 aa11.93□□□□□ -0.5
TNFRSF11A-202ENST00000586569 PRO1854Q9UHT4 67 aa11.93□□□□□ -0.5
TNFRSF11A-202ENST00000586569 HGFACQ04756 655 aa11.93□□□□□ -0.5
TNFRSF11A-202ENST00000586569 PSPNO60542 156 aa11.93□□□□□ -0.5
TNFRSF11A-202ENST00000586569 C5orf64Q2M2E5 130 aa11.92□□□□□ -0.5
TNFRSF11A-202ENST00000586569 CEND1Q8N111 149 aa11.92□□□□□ -0.5
TNFRSF11A-202ENST00000586569 TMEM190Q8WZ59 177 aa11.92□□□□□ -0.5
TNFRSF11A-202ENST00000586569 ZNRF2Q8NHG8 242 aa11.92□□□□□ -0.5
TNFRSF11A-202ENST00000586569 SPRR3Q9UBC9 169 aa11.92□□□□□ -0.5
TNFRSF11A-202ENST00000586569 IGF2BP2-AS1Q96M15 143 aa11.92□□□□□ -0.5
TNFRSF11A-202ENST00000586569 LYPD1Q8N2G4 141 aa11.92□□□□□ -0.5
TNFRSF11A-202ENST00000586569 SP7Q8TDD2 431 aaPredicted RBP11.92□□□□□ -0.5
TNFRSF11A-202ENST00000586569 PYY3Q5JQD4 70 aa11.92□□□□□ -0.5
TNFRSF11A-202ENST00000586569 TIMM17AQ99595 171 aa11.92□□□□□ -0.5
TNFRSF11A-202ENST00000586569 FBLN5Q9UBX5 448 aa11.91□□□□□ -0.5
TNFRSF11A-202ENST00000586569 TMEM213A2RRL7 107 aa11.91□□□□□ -0.5
TNFRSF11A-202ENST00000586569 H3BMG7 143 aa11.91□□□□□ -0.5
TNFRSF11A-202ENST00000586569 BUB1B-PAK6H3BSN5 160 aa11.91□□□□□ -0.5
TNFRSF11A-202ENST00000586569 NTF4P34130 210 aa11.91□□□□□ -0.5
TNFRSF11A-202ENST00000586569 CFHR4Q92496 578 aa11.91□□□□□ -0.5
TNFRSF11A-202ENST00000586569 LINC00479Q96M42 142 aa11.91□□□□□ -0.5
TNFRSF11A-202ENST00000586569 DAZ1Q9NQZ3 744 aaKnown RBP11.91□□□□□ -0.5
TNFRSF11A-202ENST00000586569 LRP5O75197 1615 aa11.91□□□□□ -0.5
TNFRSF11A-202ENST00000586569 TRAV26-2A0A0B4J265 109 aa11.91□□□□□ -0.5
TNFRSF11A-202ENST00000586569 RNASE13Q5GAN3 156 aaKnown RBP11.91□□□□□ -0.5
TNFRSF11A-202ENST00000586569 PRDM6Q9NQX0 595 aa11.91□□□□□ -0.5
TNFRSF11A-202ENST00000586569 MBD3L4A6NDZ8 208 aaPredicted RBP11.91□□□□□ -0.5
TNFRSF11A-202ENST00000586569 MBD3L3A6NE82 208 aaPredicted RBP11.91□□□□□ -0.5
TNFRSF11A-202ENST00000586569 MBD3L5A6NJ08 208 aaPredicted RBP11.91□□□□□ -0.5
TNFRSF11A-202ENST00000586569 K7EP13 123 aa11.91□□□□□ -0.5
TNFRSF11A-202ENST00000586569 RPL18AQ02543 176 aaKnown RBP11.91□□□□□ -0.5
TNFRSF11A-202ENST00000586569 MBD3L2Q8NHZ7 208 aaPredicted RBP11.91□□□□□ -0.5
TNFRSF11A-202ENST00000586569 B4DSR2 109 aa11.91□□□□□ -0.5
TNFRSF11A-202ENST00000586569 FGF16O43320 207 aa11.91□□□□□ -0.5
TNFRSF11A-202ENST00000586569 PAX9P55771 341 aa11.91□□□□□ -0.5
TNFRSF11A-202ENST00000586569 BTCP35070 178 aa11.9□□□□□ -0.5
TNFRSF11A-202ENST00000586569 NDUFA12Q9UI09 145 aa11.9□□□□□ -0.5
TNFRSF11A-202ENST00000586569 B5MCH6 92 aa11.9□□□□□ -0.5
TNFRSF11A-202ENST00000586569 MRPS18CQ9Y3D5 142 aaKnown RBP11.9□□□□□ -0.5
TNFRSF11A-202ENST00000586569 BOD1L2Q8IYS8 172 aa11.9□□□□□ -0.5
TNFRSF11A-202ENST00000586569 H0YJW9 148 aa11.9□□□□□ -0.5
TNFRSF11A-202ENST00000586569 C2orf66Q6UXQ4 117 aa11.9□□□□□ -0.5
TNFRSF11A-202ENST00000586569 IGKV1D-8A0A087WSZ0 117 aa11.9□□□□□ -0.51
TNFRSF11A-202ENST00000586569 K7ERJ3 54 aa11.9□□□□□ -0.51
TNFRSF11A-202ENST00000586569 RPP25LQ8N5L8 163 aaKnown RBP11.9□□□□□ -0.51
TNFRSF11A-202ENST00000586569 ROS1P08922 2347 aa11.9□□□□□ -0.51
TNFRSF11A-202ENST00000586569 TMEM178BH3BS89 294 aa11.89□□□□□ -0.51
TNFRSF11A-202ENST00000586569 IGKV2D-24A0A075B6R9 120 aa11.89□□□□□ -0.51
TNFRSF11A-202ENST00000586569 IGKV1-39P01597 117 aa11.89□□□□□ -0.51
TNFRSF11A-202ENST00000586569 IGKV1D-39P04432 117 aa11.89□□□□□ -0.51
TNFRSF11A-202ENST00000586569 IGKV1-9A0A0C4DH69 117 aa11.89□□□□□ -0.51
TNFRSF11A-202ENST00000586569 APOC4P55056 127 aa11.89□□□□□ -0.51
TNFRSF11A-202ENST00000586569 CSRP2Q16527 193 aa11.89□□□□□ -0.51
TNFRSF11A-202ENST00000586569 FUSP35637 526 aaKnown RBP eCLIP11.89□□□□□ -0.51
TNFRSF11A-202ENST00000586569 SIGLEC9Q9Y336 463 aa11.89□□□□□ -0.51
TNFRSF11A-202ENST00000586569 TET1Q8NFU7 2136 aa11.89□□□□□ -0.51
TNFRSF11A-202ENST00000586569 IGKV1OR2-108A0A075B7D4 117 aa11.89□□□□□ -0.51
TNFRSF11A-202ENST00000586569 IGLV3-21P80748 117 aaPredicted RBP11.89□□□□□ -0.51
TNFRSF11A-202ENST00000586569 EFNA4P52798 201 aa11.88□□□□□ -0.51
TNFRSF11A-202ENST00000586569 F6UB75 175 aa11.88□□□□□ -0.51
TNFRSF11A-202ENST00000586569 OVOL3O00110 214 aa11.88□□□□□ -0.51
TNFRSF11A-202ENST00000586569 FGFBP3Q8TAT2 258 aa11.88□□□□□ -0.51
TNFRSF11A-202ENST00000586569 ORMDL1Q9P0S3 153 aa11.88□□□□□ -0.51
TNFRSF11A-202ENST00000586569 A0A1W2PPM0 123 aa11.88□□□□□ -0.51
TNFRSF11A-202ENST00000586569 XCL1P47992 114 aa11.88□□□□□ -0.51
TNFRSF11A-202ENST00000586569 SPATA25Q9BR10 227 aa11.88□□□□□ -0.51
TNFRSF11A-202ENST00000586569 Q9HAA7 133 aa11.88□□□□□ -0.51
TNFRSF11A-202ENST00000586569 POLR3KQ9Y2Y1 108 aaPredicted RBP11.88□□□□□ -0.51
TNFRSF11A-202ENST00000586569 FOXF2Q12947 444 aa11.88□□□□□ -0.51
TNFRSF11A-202ENST00000586569 BAALC-AS2P0C853 105 aa11.88□□□□□ -0.51
TNFRSF11A-202ENST00000586569 MP68P56378 58 aa11.88□□□□□ -0.51
TNFRSF11A-202ENST00000586569 ZMAT4Q9H898 229 aa11.88□□□□□ -0.51
TNFRSF11A-202ENST00000586569 Q86TA4 180 aa11.87□□□□□ -0.51
TNFRSF11A-202ENST00000586569 LAIR2Q6ISS4 152 aa11.87□□□□□ -0.51
TNFRSF11A-202ENST00000586569 GFRA4Q9GZZ7 299 aa11.87□□□□□ -0.51
TNFRSF11A-202ENST00000586569 BUB3O43684 328 aa11.87□□□□□ -0.51
TNFRSF11A-202ENST00000586569 TMEM75Q8N9X5 138 aa11.87□□□□□ -0.51
TNFRSF11A-202ENST00000586569 FAM110DQ8TAY7 271 aaPredicted RBP11.87□□□□□ -0.51
TNFRSF11A-202ENST00000586569 TRAV1-1A0A0B4J248 108 aa11.87□□□□□ -0.51
TNFRSF11A-202ENST00000586569 A0A087WV48 116 aa11.87□□□□□ -0.51
TNFRSF11A-202ENST00000586569 HLA-DMBP28068 263 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms