RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 TCRAP04437 139 aa9.55□□□□□ -0.88
SRSF1-204ENST00000581979 HOXD3P31249 432 aaPredicted RBP9.55□□□□□ -0.88
SRSF1-204ENST00000581979 SYNJ2BPP57105 145 aa9.55□□□□□ -0.88
SRSF1-204ENST00000581979 TAS2R60P59551 318 aa9.55□□□□□ -0.88
SRSF1-204ENST00000581979 UBE2G1P62253 170 aa9.55□□□□□ -0.88
SRSF1-204ENST00000581979 DEFB136Q30KP8 78 aa9.55□□□□□ -0.88
SRSF1-204ENST00000581979 TMEM88Q6PEY1 159 aa9.55□□□□□ -0.88
SRSF1-204ENST00000581979 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.55□□□□□ -0.88
SRSF1-204ENST00000581979 REC114Q7Z4M0 266 aa9.55□□□□□ -0.88
SRSF1-204ENST00000581979 LINC01551Q86U37 167 aa9.55□□□□□ -0.88
SRSF1-204ENST00000581979 CBLN2Q8IUK8 224 aa9.55□□□□□ -0.88
SRSF1-204ENST00000581979 WFDC9Q8NEX5 89 aa9.55□□□□□ -0.88
SRSF1-204ENST00000581979 LINC00479Q96M42 142 aa9.55□□□□□ -0.88
SRSF1-204ENST00000581979 AURKAIP1Q9NWT8 199 aaPredicted RBP9.55□□□□□ -0.88
SRSF1-204ENST00000581979 TRAV34A0A0B4J273 112 aa9.54□□□□□ -0.88
SRSF1-204ENST00000581979 BMI1P35226 326 aa9.54□□□□□ -0.88
SRSF1-204ENST00000581979 CSN1S1P47710 185 aa9.54□□□□□ -0.88
SRSF1-204ENST00000581979 MEOX2P50222 304 aa9.54□□□□□ -0.88
SRSF1-204ENST00000581979 OR11H1Q8NG94 326 aa9.54□□□□□ -0.88
SRSF1-204ENST00000581979 OR1N2Q8NGR9 330 aa9.54□□□□□ -0.88
SRSF1-204ENST00000581979 RHPN1-AS1Q9BWJ2 59 aa9.54□□□□□ -0.88
SRSF1-204ENST00000581979 SMCO4Q9NRQ5 59 aa9.54□□□□□ -0.88
SRSF1-204ENST00000581979 SMPXQ9UHP9 88 aa9.54□□□□□ -0.88
SRSF1-204ENST00000581979 LGALS9O00182 355 aa9.53□□□□□ -0.88
SRSF1-204ENST00000581979 CHEK1O14757 476 aa9.53□□□□□ -0.88
SRSF1-204ENST00000581979 S100A9P06702 114 aaKnown RBP9.53□□□□□ -0.88
SRSF1-204ENST00000581979 SLURP1P55000 103 aa9.53□□□□□ -0.88
SRSF1-204ENST00000581979 TMEM183BQ1AE95 376 aa9.53□□□□□ -0.88
SRSF1-204ENST00000581979 OXLD1Q5BKU9 147 aa9.53□□□□□ -0.88
SRSF1-204ENST00000581979 GOLT1AQ6ZVE7 132 aa9.53□□□□□ -0.88
SRSF1-204ENST00000581979 OCC1Q8TAD7 63 aa9.53□□□□□ -0.88
SRSF1-204ENST00000581979 SLC50A1Q9BRV3 221 aa9.53□□□□□ -0.88
SRSF1-204ENST00000581979 ZNF331Q9NQX6 463 aaPredicted RBP9.53□□□□□ -0.88
SRSF1-204ENST00000581979 TSSC4Q9Y5U2 329 aaPredicted RBP9.53□□□□□ -0.88
SRSF1-204ENST00000581979 LY96Q9Y6Y9 160 aa9.53□□□□□ -0.88
SRSF1-204ENST00000581979 A0A087WWC5 75 aa9.53□□□□□ -0.88
SRSF1-204ENST00000581979 A0A1W2PRX2 142 aa9.53□□□□□ -0.88
SRSF1-204ENST00000581979 K7EQM0 130 aa9.53□□□□□ -0.88
SRSF1-204ENST00000581979 M0R3E3 92 aa9.53□□□□□ -0.88
SRSF1-204ENST00000581979 ISLRO14498 428 aa9.53□□□□□ -0.88
SRSF1-204ENST00000581979 MT-ND4LP03901 98 aa9.53□□□□□ -0.88
SRSF1-204ENST00000581979 EDN2P20800 178 aa9.53□□□□□ -0.88
SRSF1-204ENST00000581979 RPL11P62913 178 aaKnown RBP9.53□□□□□ -0.88
SRSF1-204ENST00000581979 RNF212Q495C1 297 aa9.53□□□□□ -0.88
SRSF1-204ENST00000581979 C8orf86Q6ZUL3 223 aa9.53□□□□□ -0.88
SRSF1-204ENST00000581979 FMC1Q96HJ9 113 aa9.53□□□□□ -0.88
SRSF1-204ENST00000581979 SGK494Q96LW2 274 aa9.53□□□□□ -0.88
SRSF1-204ENST00000581979 IGF2BP2-AS1Q96M15 143 aa9.53□□□□□ -0.88
SRSF1-204ENST00000581979 PRELID1Q9Y255 219 aa9.53□□□□□ -0.88
SRSF1-204ENST00000581979 TMEM213A2RRL7 107 aa9.52□□□□□ -0.89
SRSF1-204ENST00000581979 A8MWP6 167 aa9.52□□□□□ -0.89
SRSF1-204ENST00000581979 DIRC3C9JPN6 131 aa9.52□□□□□ -0.89
SRSF1-204ENST00000581979 HLA-DMBP28068 263 aa9.52□□□□□ -0.89
SRSF1-204ENST00000581979 KLF5Q13887 457 aaPredicted RBP9.52□□□□□ -0.89
SRSF1-204ENST00000581979 IGFL4Q6B9Z1 124 aa9.52□□□□□ -0.89
SRSF1-204ENST00000581979 ISOC2Q96AB3 205 aa9.52□□□□□ -0.89
SRSF1-204ENST00000581979 DUX3Q96PT4 197 aa9.52□□□□□ -0.89
SRSF1-204ENST00000581979 MGST1P10620 155 aaKnown RBP9.51□□□□□ -0.89
SRSF1-204ENST00000581979 BAGE2Q86Y30 109 aa9.51□□□□□ -0.89
SRSF1-204ENST00000581979 ANAPC16Q96DE5 110 aa9.51□□□□□ -0.89
SRSF1-204ENST00000581979 C16orf92Q96LL3 132 aa9.51□□□□□ -0.89
SRSF1-204ENST00000581979 CTDSP1Q9GZU7 261 aa9.51□□□□□ -0.89
SRSF1-204ENST00000581979 KLF12Q9Y4X4 402 aa9.51□□□□□ -0.89
SRSF1-204ENST00000581979 SERTM2A0A1B0GWG4 89 aa9.51□□□□□ -0.89
SRSF1-204ENST00000581979 K7EN84 100 aa9.51□□□□□ -0.89
SRSF1-204ENST00000581979 TSPAN4O14817 238 aa9.51□□□□□ -0.89
SRSF1-204ENST00000581979 PRB2P02812 416 aaPredicted RBP9.51□□□□□ -0.89
SRSF1-204ENST00000581979 PRB4P10163 310 aaPredicted RBP9.51□□□□□ -0.89
SRSF1-204ENST00000581979 TCF24Q7RTU0 167 aa9.51□□□□□ -0.89
SRSF1-204ENST00000581979 ARL6IP6Q8N6S5 226 aa9.51□□□□□ -0.89
SRSF1-204ENST00000581979 TMEM75Q8N9X5 138 aa9.51□□□□□ -0.89
SRSF1-204ENST00000581979 NHLRC2Q8NBF2 726 aa9.51□□□□□ -0.89
SRSF1-204ENST00000581979 PEMTQ9UBM1 199 aa9.51□□□□□ -0.89
SRSF1-204ENST00000581979 SELENOKQ9Y6D0 94 aa9.51□□□□□ -0.89
SRSF1-204ENST00000581979 IGKV3-7A0A075B6H7 116 aa9.5□□□□□ -0.89
SRSF1-204ENST00000581979 C2orf70A6NJV1 201 aa9.5□□□□□ -0.89
SRSF1-204ENST00000581979 H7BYZ3 331 aa9.5□□□□□ -0.89
SRSF1-204ENST00000581979 IGLV2-8P01709 118 aa9.5□□□□□ -0.89
SRSF1-204ENST00000581979 CD33P20138 364 aa9.5□□□□□ -0.89
SRSF1-204ENST00000581979 PRNTQ86SH4 94 aa9.5□□□□□ -0.89
SRSF1-204ENST00000581979 Q86TA4 180 aa9.5□□□□□ -0.89
SRSF1-204ENST00000581979 RNF182Q8N6D2 247 aa9.5□□□□□ -0.89
SRSF1-204ENST00000581979 SFRP2Q96HF1 295 aa9.5□□□□□ -0.89
SRSF1-204ENST00000581979 TUBA4BQ9H853 241 aa9.5□□□□□ -0.89
SRSF1-204ENST00000581979 NRN1Q9NPD7 142 aa9.5□□□□□ -0.89
SRSF1-204ENST00000581979 TRAV8-1A0A0A6YYK1 113 aa9.49□□□□□ -0.89
SRSF1-204ENST00000581979 TRAV8-2A0A0B4J237 113 aa9.49□□□□□ -0.89
SRSF1-204ENST00000581979 ZNF705FA8MVS1 300 aaPredicted RBP9.49□□□□□ -0.89
SRSF1-204ENST00000581979 PPP1R2P9O14990 202 aa9.49□□□□□ -0.89
SRSF1-204ENST00000581979 CBLN1P23435 193 aa9.49□□□□□ -0.89
SRSF1-204ENST00000581979 OR5I1Q13606 314 aa9.49□□□□□ -0.89
SRSF1-204ENST00000581979 PSG3Q16557 428 aa9.49□□□□□ -0.89
SRSF1-204ENST00000581979 LCN12Q6JVE5 192 aa9.49□□□□□ -0.89
SRSF1-204ENST00000581979 RAX2Q96IS3 184 aa9.49□□□□□ -0.89
SRSF1-204ENST00000581979 TMEM242Q9NWH2 141 aa9.49□□□□□ -0.89
SRSF1-204ENST00000581979 CLEC5AQ9NY25 188 aa9.49□□□□□ -0.89
SRSF1-204ENST00000581979 PSG8Q9UQ74 426 aa9.49□□□□□ -0.89
SRSF1-204ENST00000581979 IGKV2-40A0A087WW87 121 aaPredicted RBP9.48□□□□□ -0.89
SRSF1-204ENST00000581979 TRBV6-1A0A0K0K1D8 114 aa9.48□□□□□ -0.89
SRSF1-204ENST00000581979 CXorf65A6NEN9 183 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 211.3 ms